RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT2	YER161C	YPT35	P38815	214 aa	Known RBP	2.99	□□□□□ -1.93
SPT2	YER161C	MTC6	P38849	526 aa		2.99	□□□□□ -1.93
SPT2	YER161C	DHH1	P39517	506 aa	Known RBP	2.99	□□□□□ -1.93
SPT2	YER161C	RFC4	P40339	323 aa	Known RBP	2.99	□□□□□ -1.93
SPT2	YER161C	CFD1	P40558	293 aa		2.99	□□□□□ -1.93
SPT2	YER161C	AZF1	P41696	914 aa		2.99	□□□□□ -1.93
SPT2	YER161C	KEG1	P43614	200 aa		2.99	□□□□□ -1.93
SPT2	YER161C	GWT1	P47026	490 aa		2.99	□□□□□ -1.93
SPT2	YER161C	AVT4	P50944	713 aa		2.99	□□□□□ -1.93
SPT2	YER161C	POP6	P53218	158 aa		2.99	□□□□□ -1.93
SPT2	YER161C	OKP1	P53298	406 aa		2.99	□□□□□ -1.93
SPT2	YER161C	MKC7	P53379	596 aa		2.99	□□□□□ -1.93
SPT2	YER161C	RTC4	P53850	401 aa		2.99	□□□□□ -1.93
SPT2	YER161C	YDR209C	Q03480	137 aa		2.99	□□□□□ -1.93
SPT2	YER161C	YLR283W	Q05867	314 aa		2.99	□□□□□ -1.93
SPT2	YER161C	VPS74	Q06385	345 aa		2.99	□□□□□ -1.93
SPT2	YER161C	YDL009C	Q12210	107 aa		2.99	□□□□□ -1.93
SPT2	YER161C	RPL42A	P0CX27	106 aa	Known RBP	2.98	□□□□□ -1.93
SPT2	YER161C	RPL42B	P0CX28	106 aa	Known RBP	2.98	□□□□□ -1.93
SPT2	YER161C	AIM17	P23180	465 aa	Known RBP	2.98	□□□□□ -1.93
SPT2	YER161C	DEP1	P31385	405 aa		2.98	□□□□□ -1.93
SPT2	YER161C	YEF1	P32622	495 aa		2.98	□□□□□ -1.93
SPT2	YER161C	PRP18	P33411	251 aa	Predicted RBP	2.98	□□□□□ -1.93
SPT2	YER161C	TIR2	P33890	251 aa		2.98	□□□□□ -1.93
SPT2	YER161C	RIB1	P38066	345 aa		2.98	□□□□□ -1.93
SPT2	YER161C	CHK1	P38147	527 aa		2.98	□□□□□ -1.93
SPT2	YER161C	SMF2	P38778	549 aa		2.98	□□□□□ -1.93
SPT2	YER161C	YIL169C	P40442	995 aa		2.98	□□□□□ -1.93
SPT2	YER161C	DFG10	P40526	253 aa		2.98	□□□□□ -1.93
SPT2	YER161C	YIA6	P40556	373 aa		2.98	□□□□□ -1.93
SPT2	YER161C	ABM1	P47146	123 aa		2.98	□□□□□ -1.93
SPT2	YER161C	CPD1	P53314	239 aa		2.98	□□□□□ -1.93
SPT2	YER161C	HCH1	P53834	153 aa		2.98	□□□□□ -1.93
SPT2	YER161C	YNL181W	P53878	407 aa		2.98	□□□□□ -1.93
SPT2	YER161C	ODC1	Q03028	310 aa		2.98	□□□□□ -1.93
SPT2	YER161C	CSM3	Q04659	317 aa		2.98	□□□□□ -1.93
SPT2	YER161C	BNA5	Q05979	453 aa		2.98	□□□□□ -1.93
SPT2	YER161C	SMC5	Q08204	1093 aa		2.98	□□□□□ -1.93
SPT2	YER161C	NDD1	Q08887	554 aa		2.98	□□□□□ -1.93
SPT2	YER161C	YPL199C	Q08954	240 aa		2.98	□□□□□ -1.93
SPT2	YER161C	APC9	Q12107	265 aa		2.98	□□□□□ -1.93
SPT2	YER161C	TMS1	Q12116	473 aa		2.98	□□□□□ -1.93
SPT2	YER161C	TPT1	Q12272	230 aa	Known RBP	2.98	□□□□□ -1.93
SPT2	YER161C	GCN2	P15442	1659 aa		2.98	□□□□□ -1.93
SPT2	YER161C	THP2	O13539	261 aa	Known RBP	2.97	□□□□□ -1.93
SPT2	YER161C	CDC33	P07260	213 aa	Known RBP	2.97	□□□□□ -1.93
SPT2	YER161C	STE18	P18852	110 aa		2.97	□□□□□ -1.93
SPT2	YER161C	YCR043C	P25361	127 aa		2.97	□□□□□ -1.93
SPT2	YER161C	ZIP1	P31111	875 aa		2.97	□□□□□ -1.93
SPT2	YER161C	GLC7	P32598	312 aa	Known RBP	2.97	□□□□□ -1.93
SPT2	YER161C	YKL063C	P35725	167 aa		2.97	□□□□□ -1.93
SPT2	YER161C	PCL6	P40038	420 aa		2.97	□□□□□ -1.93
SPT2	YER161C	UTP18	P40362	594 aa	Predicted RBP	2.97	□□□□□ -1.93
SPT2	YER161C	YCH1	P42937	148 aa		2.97	□□□□□ -1.93
SPT2	YER161C	SFH5	P47008	294 aa		2.97	□□□□□ -1.93
SPT2	YER161C	RMR1	P53060	241 aa		2.97	□□□□□ -1.93
SPT2	YER161C	LIF1	P53150	421 aa		2.97	□□□□□ -1.93
SPT2	YER161C	EFM5	P53200	248 aa	Known RBP	2.97	□□□□□ -1.93
SPT2	YER161C	ZRG17	P53735	605 aa		2.97	□□□□□ -1.93
SPT2	YER161C	CUS2	P53830	285 aa	Predicted RBP	2.97	□□□□□ -1.93
SPT2	YER161C	YMR226C	Q05016	267 aa	Known RBP	2.97	□□□□□ -1.93
SPT2	YER161C	ECI1	Q05871	280 aa		2.97	□□□□□ -1.93
SPT2	YER161C	DCR2	Q05924	578 aa		2.97	□□□□□ -1.93
SPT2	YER161C	CDD1	Q06549	142 aa		2.97	□□□□□ -1.93
SPT2	YER161C	SRL1	Q08673	210 aa		2.97	□□□□□ -1.93
SPT2	YER161C	YLR108C	Q12259	485 aa		2.97	□□□□□ -1.93
SPT2	YER161C	SNF8	Q12483	233 aa		2.97	□□□□□ -1.93
SPT2	YER161C	YBL111C	Q3E7Y5	667 aa		2.97	□□□□□ -1.93
SPT2	YER161C	AI5_BETA	Q9ZZX0	354 aa		2.97	□□□□□ -1.93
SPT2	YER161C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
SPT2	YER161C	TCP1	P12612	559 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	AMD1	P15274	810 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	HEM15	P16622	393 aa		2.96	□□□□□ -1.94
SPT2	YER161C	DCC1	P25559	380 aa		2.96	□□□□□ -1.94
SPT2	YER161C	VMA6	P32366	345 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	KAR9	P32526	644 aa		2.96	□□□□□ -1.94
SPT2	YER161C	SPC34	P36131	295 aa		2.96	□□□□□ -1.94
SPT2	YER161C	ECM8	P38246	354 aa		2.96	□□□□□ -1.94
SPT2	YER161C	YAP3	P38749	330 aa		2.96	□□□□□ -1.94
SPT2	YER161C	YIR016W	P40572	265 aa		2.96	□□□□□ -1.94
SPT2	YER161C	YNL320W	P42840	284 aa		2.96	□□□□□ -1.94
SPT2	YER161C	WWM1	P43582	211 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	SAD1	P43589	448 aa		2.96	□□□□□ -1.94
SPT2	YER161C	RTT101	P47050	842 aa		2.96	□□□□□ -1.94
SPT2	YER161C	TAD2	P47058	250 aa		2.96	□□□□□ -1.94
SPT2	YER161C	HAM1	P47119	197 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	HSH155	P49955	971 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	NBP1	P52919	319 aa	Predicted RBP	2.96	□□□□□ -1.94
SPT2	YER161C	VEL1	P53058	206 aa		2.96	□□□□□ -1.94
SPT2	YER161C	PIR3	Q03180	325 aa		2.96	□□□□□ -1.94
SPT2	YER161C	SNX3	Q08826	162 aa	Known RBP	2.96	□□□□□ -1.94
SPT2	YER161C	SEY1	Q99287	776 aa		2.96	□□□□□ -1.94
SPT2	YER161C	IZH4	Q99393	312 aa		2.96	□□□□□ -1.94
SPT2	YER161C	RPL27A	P0C2H6	136 aa	Known RBP	2.95	□□□□□ -1.94
SPT2	YER161C	RPL27B	P0C2H7	136 aa	Known RBP	2.95	□□□□□ -1.94
SPT2	YER161C	RPS5	P26783	225 aa	Known RBP	2.95	□□□□□ -1.94
SPT2	YER161C	RPL16B	P26785	198 aa	Known RBP	2.95	□□□□□ -1.94
SPT2	YER161C	NUP2	P32499	720 aa		2.95	□□□□□ -1.94
SPT2	YER161C	MUD1	P32605	298 aa	Known RBP	2.95	□□□□□ -1.94
SPT2	YER161C	PTR2	P32901	601 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms