RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W YGR015CP53208 328 aa0.99□□□□□ -2.25
YCK3YER123W YDL109CQ12103 647 aa0.99□□□□□ -2.25
YCK3YER123W PDE2P06776 526 aa0.98□□□□□ -2.25
YCK3YER123W CPR2P23285 205 aa0.98□□□□□ -2.25
YCK3YER123W RAD23P32628 398 aaKnown RBP0.98□□□□□ -2.25
YCK3YER123W YSC83P32792 385 aa0.98□□□□□ -2.25
YCK3YER123W SKG6P32900 734 aaPredicted RBP0.98□□□□□ -2.25
YCK3YER123W JNM1P36224 373 aa0.98□□□□□ -2.25
YCK3YER123W NAB3P38996 802 aaKnown RBP RIP-Chip data0.98□□□□□ -2.25not detected
YCK3YER123W UFE1P41834 346 aa0.98□□□□□ -2.25
YCK3YER123W ASG7P46993 209 aa0.98□□□□□ -2.25
YCK3YER123W SED5Q01590 340 aa0.98□□□□□ -2.25
YCK3YER123W MDM1Q01846 1127 aa0.98□□□□□ -2.25
YCK3YER123W VTI1Q04338 217 aa0.98□□□□□ -2.25
YCK3YER123W LDS2Q08218 356 aa0.98□□□□□ -2.25
YCK3YER123W STE2D6VTK4 431 aa0.97□□□□□ -2.25
YCK3YER123W RPL1AP0CX43 217 aaKnown RBP0.97□□□□□ -2.25
YCK3YER123W RPL1BP0CX44 217 aaKnown RBP0.97□□□□□ -2.25
YCK3YER123W RNA1P11745 407 aaKnown RBP0.97□□□□□ -2.25
YCK3YER123W MIR1P23641 311 aaKnown RBP0.97□□□□□ -2.25
YCK3YER123W ATG15P25641 520 aa0.97□□□□□ -2.25
YCK3YER123W YJR054WP47114 497 aa0.97□□□□□ -2.25
YCK3YER123W CDH1P53197 566 aa0.97□□□□□ -2.25
YCK3YER123W YGR111WP53265 400 aa0.97□□□□□ -2.25
YCK3YER123W RTT102P53330 157 aa0.97□□□□□ -2.25
YCK3YER123W SLT2Q00772 484 aa0.97□□□□□ -2.25
YCK3YER123W API2Q04413 109 aa0.97□□□□□ -2.25
YCK3YER123W AAD15Q08361 143 aa0.97□□□□□ -2.25
YCK3YER123W YOR338WQ99326 363 aa0.97□□□□□ -2.25
YCK3YER123W BLM10P43583 2143 aa0.97□□□□□ -2.25
YCK3YER123W RPL23AP0CX41 137 aaKnown RBP0.96□□□□□ -2.26
YCK3YER123W RPL23BP0CX42 137 aaKnown RBP0.96□□□□□ -2.26
YCK3YER123W RPC53P25441 422 aa0.96□□□□□ -2.26
YCK3YER123W BDH1P39714 382 aa0.96□□□□□ -2.26
YCK3YER123W ZIM17P42844 174 aa0.96□□□□□ -2.26
YCK3YER123W AIM23P47015 356 aa0.96□□□□□ -2.26
YCK3YER123W LIF1P53150 421 aa0.96□□□□□ -2.26
YCK3YER123W YDR541CQ03049 344 aa0.96□□□□□ -2.26
YCK3YER123W RSM10Q03201 203 aa0.96□□□□□ -2.26
YCK3YER123W YOL029CQ08187 201 aa0.96□□□□□ -2.26
YCK3YER123W DCI1Q08558 271 aa0.96□□□□□ -2.26
YCK3YER123W SCH9P11792 824 aaKnown RBP0.96□□□□□ -2.26
YCK3YER123W PDX1P16451 410 aa0.96□□□□□ -2.26
YCK3YER123W MDH1P17505 334 aaKnown RBP RIP-Chip data0.96□□□□□ -2.26not detected
YCK3YER123W PSO2P30620 661 aa0.96□□□□□ -2.26
YCK3YER123W PMT2P31382 759 aa0.96□□□□□ -2.26
YCK3YER123W UTR5P32630 166 aa0.96□□□□□ -2.26
YCK3YER123W LTV1P34078 463 aa0.96□□□□□ -2.26
YCK3YER123W GGC1P38988 300 aa0.96□□□□□ -2.26
YCK3YER123W GAS2Q06135 555 aa0.96□□□□□ -2.26
YCK3YER123W NDL1Q06568 189 aa0.96□□□□□ -2.26
YCK3YER123W NOP6Q07623 225 aaKnown RBP0.96□□□□□ -2.26
YCK3YER123W GAT3Q07928 141 aa0.96□□□□□ -2.26
YCK3YER123W UAF30Q08747 228 aa0.96□□□□□ -2.26
YCK3YER123W BPH1P25356 2167 aa0.95□□□□□ -2.26
YCK3YER123W STT4P37297 1900 aa0.95□□□□□ -2.26
YCK3YER123W MAS1P10507 462 aa0.95□□□□□ -2.26
YCK3YER123W DAL5P15365 543 aa0.95□□□□□ -2.26
YCK3YER123W MRPL8P22353 238 aa0.95□□□□□ -2.26
YCK3YER123W RRP7P25368 297 aaPredicted RBP0.95□□□□□ -2.26
YCK3YER123W SWE1P32944 819 aa0.95□□□□□ -2.26
YCK3YER123W CSE1P33307 960 aa0.95□□□□□ -2.26
YCK3YER123W YKR015CP36111 568 aa0.95□□□□□ -2.26
YCK3YER123W PHO88P38264 188 aaPredicted RBP0.95□□□□□ -2.26
YCK3YER123W YHL026CP38740 315 aa0.95□□□□□ -2.26
YCK3YER123W RBG1P39729 369 aa0.95□□□□□ -2.26
YCK3YER123W PRM1P53835 661 aa0.95□□□□□ -2.26
YCK3YER123W SPC19Q03954 165 aa0.95□□□□□ -2.26
YCK3YER123W APC4Q04601 652 aa0.95□□□□□ -2.26
YCK3YER123W MMT2Q08970 484 aa0.95□□□□□ -2.26
YCK3YER123W YDL211CQ12121 372 aa0.95□□□□□ -2.26
YCK3YER123W RPS23AP0CX29 145 aaKnown RBP0.94□□□□□ -2.26
YCK3YER123W RPS23BP0CX30 145 aa0.94□□□□□ -2.26
YCK3YER123W BGL2P15703 313 aaKnown RBP0.94□□□□□ -2.26
YCK3YER123W COX10P21592 462 aa0.94□□□□□ -2.26
YCK3YER123W SSE1P32589 693 aaKnown RBP0.94□□□□□ -2.26
YCK3YER123W PPQ1P32945 549 aa0.94□□□□□ -2.26
YCK3YER123W TIP20P33891 701 aa0.94□□□□□ -2.26
YCK3YER123W SCC4P40090 624 aa0.94□□□□□ -2.26
YCK3YER123W TIF34P40217 347 aaKnown RBP0.94□□□□□ -2.26
YCK3YER123W NAS6P50086 228 aa0.94□□□□□ -2.26
YCK3YER123W GMC1Q04399 608 aa0.94□□□□□ -2.26
YCK3YER123W SPH1Q06160 661 aa0.94□□□□□ -2.26
YCK3YER123W YLH47Q06493 454 aa0.94□□□□□ -2.26
YCK3YER123W YOL024WQ08172 172 aa0.94□□□□□ -2.26
YCK3YER123W ISA2Q12425 185 aa0.94□□□□□ -2.26
YCK3YER123W CUP2P15315 225 aa0.93□□□□□ -2.26
YCK3YER123W BUD2P33314 1104 aa0.93□□□□□ -2.26
YCK3YER123W SDH4P37298 181 aa0.93□□□□□ -2.26
YCK3YER123W KAP104P38217 918 aaKnown RBP0.93□□□□□ -2.26
YCK3YER123W YMR262WP38430 313 aa0.93□□□□□ -2.26
YCK3YER123W EFM1P38732 585 aa0.93□□□□□ -2.26
YCK3YER123W MNL1P38888 796 aa0.93□□□□□ -2.26
YCK3YER123W EFM3P47163 339 aa0.93□□□□□ -2.26
YCK3YER123W MEH1Q02205 184 aa0.93□□□□□ -2.26
YCK3YER123W SMD1Q02260 146 aaPredicted RBP0.93□□□□□ -2.26
YCK3YER123W INM2Q05533 292 aa0.93□□□□□ -2.26
YCK3YER123W SHS1Q07657 551 aa0.93□□□□□ -2.26
YCK3YER123W SAC3P46674 1301 aa0.93□□□□□ -2.26
YCK3YER123W SSA3P09435 649 aaKnown RBP0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 110.1 ms