RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W RVB1Q03940 463 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W SNX41Q04053 625 aa2.26□□□□□ -2.05
SNX41YDR425W SMA2Q04658 369 aa2.26□□□□□ -2.05
SNX41YDR425W NEJ1Q06148 342 aa2.26□□□□□ -2.05
SNX41YDR425W SLF1Q12034 447 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W PST2Q12335 198 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W YIL002W-AQ3E7Z5 69 aa2.26□□□□□ -2.05
SNX41YDR425W MHF1Q3E835 90 aa2.26□□□□□ -2.05
SNX41YDR425W LAG2Q92325 660 aa2.26□□□□□ -2.05
SNX41YDR425W THP2O13539 261 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W COS2P0CX12 379 aa2.26□□□□□ -2.05
SNX41YDR425W COS3P0CX13 379 aa2.26□□□□□ -2.05
SNX41YDR425W RPL3P14126 387 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W ARO3P14843 370 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W HSP26P15992 214 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05 RIP-Chip
SNX41YDR425W PUT3P25502 979 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W PHO91P27514 894 aa2.26□□□□□ -2.05
SNX41YDR425W RIM1P32445 135 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W SHP1P34223 423 aa2.26□□□□□ -2.05
SNX41YDR425W CBT1P36038 271 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W RSM22P36056 628 aa2.26□□□□□ -2.05
SNX41YDR425W MAK5P38112 773 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W TCM62P38228 572 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W FMP23P38231 175 aa2.26□□□□□ -2.05
SNX41YDR425W RRF1P38771 230 aa2.26□□□□□ -2.05
SNX41YDR425W BIG1P38813 335 aa2.26□□□□□ -2.05
SNX41YDR425W YHR182WP38870 785 aa2.26□□□□□ -2.05
SNX41YDR425W RCY1P39531 840 aa2.26□□□□□ -2.05
SNX41YDR425W YEL068CP39977 110 aa2.26□□□□□ -2.05
SNX41YDR425W EDC3P39998 551 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W YER034WP40022 185 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W SHO1P40073 367 aa2.26□□□□□ -2.05
SNX41YDR425W FIS1P40515 155 aa2.26□□□□□ -2.05
SNX41YDR425W ARF3P40994 183 aaRIP-Chip data2.26□□□□□ -2.05not detected
SNX41YDR425W LSM1P47017 172 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W AIM22P47051 409 aa2.26□□□□□ -2.05
SNX41YDR425W OCA1P50946 238 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W YGL039WP53183 348 aaKnown RBP2.26□□□□□ -2.05
SNX41YDR425W JAC1P53193 184 aa2.26□□□□□ -2.05
SNX41YDR425W YGR026WP53217 278 aa2.26□□□□□ -2.05
SNX41YDR425W PNG1Q02890 363 aa2.26□□□□□ -2.05
SNX41YDR425W YDR541CQ03049 344 aa2.26□□□□□ -2.05
SNX41YDR425W YMR279CQ03263 540 aa2.26□□□□□ -2.05
SNX41YDR425W RRN11Q04712 507 aa2.26□□□□□ -2.05
SNX41YDR425W CDC123Q05791 360 aa2.26□□□□□ -2.05
SNX41YDR425W VPS74Q06385 345 aa2.26□□□□□ -2.05
SNX41YDR425W SKI7Q08491 747 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W CLP1Q08685 445 aaPredicted RBP2.26□□□□□ -2.05
SNX41YDR425W YOL107WQ12239 342 aa2.26□□□□□ -2.05
SNX41YDR425W YLR126CQ12288 251 aa2.26□□□□□ -2.05
SNX41YDR425W ENT1Q12518 454 aa2.26□□□□□ -2.05
SNX41YDR425W YGL194C-AQ2V2P6 80 aa2.26□□□□□ -2.05
SNX41YDR425W RIB3Q99258 208 aa2.26□□□□□ -2.05
SNX41YDR425W BNI1P41832 1953 aa2.25□□□□□ -2.05
SNX41YDR425W TCP1P12612 559 aaKnown RBP2.25□□□□□ -2.05
SNX41YDR425W PRP2P20095 876 aaPredicted RBP2.25□□□□□ -2.05
SNX41YDR425W DBR1P24309 405 aaKnown RBP2.25□□□□□ -2.05
SNX41YDR425W PEX34P25584 144 aa2.25□□□□□ -2.05
SNX41YDR425W ERG9P29704 444 aa2.25□□□□□ -2.05
SNX41YDR425W DPH2P32461 534 aa2.25□□□□□ -2.05
SNX41YDR425W MRPL6P32904 214 aa2.25□□□□□ -2.05
SNX41YDR425W VAM7P32912 316 aa2.25□□□□□ -2.05
SNX41YDR425W TUL1P36096 758 aa2.25□□□□□ -2.05
SNX41YDR425W UIP5P36137 443 aa2.25□□□□□ -2.05
SNX41YDR425W MRPL3P36516 390 aa2.25□□□□□ -2.05
SNX41YDR425W NOP4P37838 685 aaKnown RBP2.25□□□□□ -2.05
SNX41YDR425W SBE22P38814 852 aa2.25□□□□□ -2.05
SNX41YDR425W BFR1P38934 470 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SNX41YDR425W ERP2P39704 215 aa2.25□□□□□ -2.05
SNX41YDR425W COG3P40094 801 aa2.25□□□□□ -2.05
SNX41YDR425W ALG8P40351 577 aa2.25□□□□□ -2.05
SNX41YDR425W ASG7P46993 209 aa2.25□□□□□ -2.05
SNX41YDR425W LSM8P47093 109 aaKnown RBP2.25□□□□□ -2.05
SNX41YDR425W UPF3P48412 387 aaKnown RBP2.25□□□□□ -2.05
SNX41YDR425W UBC12P52491 188 aa2.25□□□□□ -2.05
SNX41YDR425W LCL3P53153 274 aa2.25□□□□□ -2.05
SNX41YDR425W YGR168CP53293 376 aa2.25□□□□□ -2.05
SNX41YDR425W NOP13P53883 403 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SNX41YDR425W SLM2P53955 656 aa2.25□□□□□ -2.05
SNX41YDR425W PRP38Q00723 242 aaPredicted RBP2.25□□□□□ -2.05
SNX41YDR425W IRC15Q02733 499 aa2.25□□□□□ -2.05
SNX41YDR425W SVL3Q03088 825 aaKnown RBP2.25□□□□□ -2.05
SNX41YDR425W GAS3Q03655 524 aa2.25□□□□□ -2.05
SNX41YDR425W TRM82Q03774 444 aa2.25□□□□□ -2.05
SNX41YDR425W YLR345WQ06137 509 aa2.25□□□□□ -2.05
SNX41YDR425W SLD7Q08457 257 aa2.25□□□□□ -2.05
SNX41YDR425W APC5Q08683 685 aa2.25□□□□□ -2.05
SNX41YDR425W HNT3Q08702 217 aa2.25□□□□□ -2.05
SNX41YDR425W DGK1Q12382 290 aa2.25□□□□□ -2.05
SNX41YDR425W YPL247CQ12523 523 aa2.25□□□□□ -2.05
SNX41YDR425W CTF3Q12748 733 aa2.25□□□□□ -2.05
SNX41YDR425W YJR112W-AQ3E743 109 aa2.25□□□□□ -2.05
SNX41YDR425W YCL021W-AQ96VH3 125 aa2.25□□□□□ -2.05
SNX41YDR425W FLO1P32768 1537 aa2.25□□□□□ -2.05
SNX41YDR425W GCN4P03069 281 aa2.24□□□□□ -2.05
SNX41YDR425W PUT4P15380 627 aa2.24□□□□□ -2.05
SNX41YDR425W BUB2P26448 306 aaPredicted RBP2.24□□□□□ -2.05
SNX41YDR425W MRP4P32902 394 aa2.24□□□□□ -2.05
SNX41YDR425W MSN2P33748 704 aa2.24□□□□□ -2.05
SNX41YDR425W SEF1P34228 1148 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms