RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SRB7, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRB7YDR308C PMT4P46971 762 aa2.56□□□□□ -2
SRB7YDR308C SDS23P53172 527 aa2.56□□□□□ -2
SRB7YDR308C SMD1Q02260 146 aaPredicted RBP2.56□□□□□ -2
SRB7YDR308C SAM4Q08985 325 aaKnown RBP2.56□□□□□ -2
SRB7YDR308C PRM4Q12498 284 aa2.56□□□□□ -2
SRB7YDR308C DFM1Q12743 341 aaKnown RBP2.56□□□□□ -2
SRB7YDR308C SAL1D6W196 494 aa2.55□□□□□ -2
SRB7YDR308C STF1P01098 86 aa2.55□□□□□ -2
SRB7YDR308C VMA2P16140 517 aaKnown RBP2.55□□□□□ -2
SRB7YDR308C YPS1P32329 569 aa2.55□□□□□ -2
SRB7YDR308C SRB2P34162 210 aa2.55□□□□□ -2
SRB7YDR308C YKL187CP34231 750 aa2.55□□□□□ -2
SRB7YDR308C RCK1P38622 512 aa2.55□□□□□ -2
SRB7YDR308C SLM1P40485 686 aa2.55□□□□□ -2
SRB7YDR308C UTP25P40498 721 aaKnown RBP2.55□□□□□ -2
SRB7YDR308C CPR7P47103 393 aa2.55□□□□□ -2
SRB7YDR308C YPL080CQ02826 108 aa2.55□□□□□ -2
SRB7YDR308C VTI1Q04338 217 aa2.55□□□□□ -2
SRB7YDR308C YLR297WQ05899 129 aa2.55□□□□□ -2
SRB7YDR308C YPL245WQ12179 454 aaKnown RBP2.55□□□□□ -2
SRB7YDR308C TFC7Q12415 435 aa2.55□□□□□ -2
SRB7YDR308C YPR1Q12458 312 aa2.55□□□□□ -2
SRB7YDR308C BI3Q9ZZW7 517 aa2.55□□□□□ -2
SRB7YDR308C CDC37P06101 506 aaKnown RBP2.54□□□□□ -2
SRB7YDR308C AGA2P32781 87 aa2.54□□□□□ -2
SRB7YDR308C PET8P38921 284 aa2.54□□□□□ -2
SRB7YDR308C RRG9P40156 214 aa2.54□□□□□ -2
SRB7YDR308C ECM19Q06011 112 aa2.54□□□□□ -2
SRB7YDR308C MIM1Q08176 113 aa2.54□□□□□ -2
SRB7YDR308C YPR096CO13587 100 aa2.53□□□□□ -2
SRB7YDR308C CBP2P03874 630 aaPredicted RBP2.53□□□□□ -2
SRB7YDR308C IME2P32581 645 aa2.53□□□□□ -2
SRB7YDR308C AIM20P40451 204 aa2.53□□□□□ -2
SRB7YDR308C COS4P43542 379 aa2.53□□□□□ -2
SRB7YDR308C YGR266WP53326 701 aa2.53□□□□□ -2
SRB7YDR308C CAB5Q03941 241 aa2.53□□□□□ -2
SRB7YDR308C VIK1Q12045 647 aa2.53□□□□□ -2
SRB7YDR308C UTP23Q12339 254 aaKnown RBP2.53□□□□□ -2
SRB7YDR308C RPB9P27999 122 aa2.52□□□□□ -2.01
SRB7YDR308C SUR1P33300 382 aa2.52□□□□□ -2.01
SRB7YDR308C POP2P39008 433 aa2.52□□□□□ -2.01
SRB7YDR308C YNR066CP53752 436 aa2.52□□□□□ -2.01
SRB7YDR308C SNX41Q04053 625 aa2.52□□□□□ -2.01
SRB7YDR308C PBP4Q07362 185 aaKnown RBP2.52□□□□□ -2.01
SRB7YDR308C YLR012CQ07927 99 aa2.52□□□□□ -2.01
SRB7YDR308C SWC5P38326 303 aa2.51□□□□□ -2.01
SRB7YDR308C ASP1P38986 381 aaPredicted RBP2.51□□□□□ -2.01
SRB7YDR308C SSO2P39926 295 aa2.51□□□□□ -2.01
SRB7YDR308C UBX2Q04228 584 aa2.51□□□□□ -2.01
SRB7YDR308C ARC18Q05933 178 aaKnown RBP2.51□□□□□ -2.01
SRB7YDR308C STE23Q06010 1027 aa2.51□□□□□ -2.01
SRB7YDR308C TRM10Q12400 293 aa2.51□□□□□ -2.01
SRB7YDR308C LAG2Q92325 660 aa2.51□□□□□ -2.01
SRB7YDR308C RAD7P06779 565 aa2.5□□□□□ -2.01
SRB7YDR308C RPL16BP26785 198 aaKnown RBP2.5□□□□□ -2.01
SRB7YDR308C MRPL6P32904 214 aa2.5□□□□□ -2.01
SRB7YDR308C CSE1P33307 960 aa2.5□□□□□ -2.01
SRB7YDR308C BUD2P33314 1104 aa2.5□□□□□ -2.01
SRB7YDR308C SLX1P38324 304 aa2.5□□□□□ -2.01
SRB7YDR308C YHR035WP38769 630 aa2.5□□□□□ -2.01
SRB7YDR308C SOP4P39543 234 aaPredicted RBP2.5□□□□□ -2.01
SRB7YDR308C EDC2P40023 145 aaPredicted RBP2.5□□□□□ -2.01
SRB7YDR308C INA22P40576 216 aa2.5□□□□□ -2.01
SRB7YDR308C YFL040WP43562 540 aa2.5□□□□□ -2.01
SRB7YDR308C CSI1Q04368 295 aa2.5□□□□□ -2.01
SRB7YDR308C PRP46Q12417 451 aaPredicted RBP2.5□□□□□ -2.01
SRB7YDR308C TDH3P00359 332 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
SRB7YDR308C RPS23AP0CX29 145 aaKnown RBP2.49□□□□□ -2.01
SRB7YDR308C RPS23BP0CX30 145 aa2.49□□□□□ -2.01
SRB7YDR308C TPM1P17536 199 aaKnown RBP2.49□□□□□ -2.01
SRB7YDR308C YKL162CP36052 402 aa2.49□□□□□ -2.01
SRB7YDR308C FET3P38993 636 aa2.49□□□□□ -2.01
SRB7YDR308C PES4P39684 611 aa2.49□□□□□ -2.01
SRB7YDR308C ECO1P43605 281 aa2.49□□□□□ -2.01
SRB7YDR308C DIA1P54005 336 aa2.49□□□□□ -2.01
SRB7YDR308C YOR292CQ08743 309 aa2.49□□□□□ -2.01
SRB7YDR308C YPL278CQ08990 100 aa2.49□□□□□ -2.01
SRB7YDR308C YPR063CQ12160 140 aa2.49□□□□□ -2.01
SRB7YDR308C RRP42Q12277 265 aaPredicted RBP2.49□□□□□ -2.01
SRB7YDR308C IZH4Q99393 312 aa2.49□□□□□ -2.01
SRB7YDR308C PET18P25362 215 aa2.48□□□□□ -2.01
SRB7YDR308C CDC13P32797 924 aaKnown RBP2.48□□□□□ -2.01
SRB7YDR308C YIL012WP40551 113 aa2.48□□□□□ -2.01
SRB7YDR308C BUD13P46947 266 aaPredicted RBP2.48□□□□□ -2.01
SRB7YDR308C RPN14P53196 417 aa2.48□□□□□ -2.01
SRB7YDR308C SWC4P53201 476 aa2.48□□□□□ -2.01
SRB7YDR308C OKP1P53298 406 aa2.48□□□□□ -2.01
SRB7YDR308C ABZ2Q03266 374 aa2.48□□□□□ -2.01
SRB7YDR308C YMR111CQ04461 462 aaPredicted RBP2.48□□□□□ -2.01
SRB7YDR308C SEC13Q04491 297 aaKnown RBP2.48□□□□□ -2.01
SRB7YDR308C YDR114CQ04597 100 aa2.48□□□□□ -2.01
SRB7YDR308C DIB1Q06819 143 aaPredicted RBP2.48□□□□□ -2.01
SRB7YDR308C RTC5Q12108 567 aaKnown RBP2.48□□□□□ -2.01
SRB7YDR308C IES3Q12345 250 aa2.48□□□□□ -2.01
SRB7YDR308C ERP3Q12403 225 aa2.48□□□□□ -2.01
SRB7YDR308C CAR2P07991 424 aaKnown RBP2.47□□□□□ -2.01
SRB7YDR308C HPR1P17629 752 aaKnown RBP2.47□□□□□ -2.01
SRB7YDR308C AIM29P36154 155 aa2.47□□□□□ -2.01
SRB7YDR308C ECM14P38836 430 aa2.47□□□□□ -2.01
SRB7YDR308C OSW5P40219 148 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms