RNA–Protein interactions for RNA: YDL002C

NHP10, Transcript of Non-essential INO80 chromatin remodeling complex subunit, yeast

Gene NHP10, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP10	YDL002C	ALF1	P53904	254 aa		3.19	□□□□□ -1.9
NHP10	YDL002C	CSM3	Q04659	317 aa		3.19	□□□□□ -1.9
NHP10	YDL002C	YHC1	Q05900	231 aa	Known RBP	3.19	□□□□□ -1.9
NHP10	YDL002C	HTZ1	Q12692	134 aa	Known RBP	3.19	□□□□□ -1.9
NHP10	YDL002C	RGS2	Q99188	309 aa		3.19	□□□□□ -1.9
NHP10	YDL002C	BEM2	P39960	2167 aa	Known RBP	3.19	□□□□□ -1.9
NHP10	YDL002C	UTP20	P35194	2493 aa	Known RBP	3.18	□□□□□ -1.9
NHP10	YDL002C	PRP8	P33334	2413 aa	Known RBP	3.18	□□□□□ -1.9
NHP10	YDL002C	ERG9	P29704	444 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	MKK1	P32490	508 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	MRPL40	P36534	297 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	SWC5	P38326	303 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	RBG1	P39729	369 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	YFR018C	P43599	363 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	YFR057W	P43625	151 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	SHY1	P53266	389 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	CRH1	P53301	507 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	DBP6	P53734	629 aa	Known RBP	3.18	□□□□□ -1.9
NHP10	YDL002C	ARP5	P53946	755 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	REX2	P54964	269 aa	Known RBP	3.18	□□□□□ -1.9
NHP10	YDL002C	CAB5	Q03941	241 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	YLR297W	Q05899	129 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	RRG7	Q08774	242 aa	Predicted RBP	3.18	□□□□□ -1.9
NHP10	YDL002C	MCT1	Q12283	360 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	HRT3	Q12347	344 aa		3.18	□□□□□ -1.9
NHP10	YDL002C	RPS18A	P0CX55	146 aa	Known RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	RPS18B	P0CX56	146 aa	Predicted RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	DAL80	P26343	269 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	RPL16A	P26784	199 aa	Known RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	YPS1	P32329	569 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	HXT1	P32465	570 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	MYO3	P36006	1272 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	YKR015C	P36111	568 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	LSM12	P38828	187 aa	Known RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	AIM10	P39965	576 aa	Known RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	YER186C	P40101	306 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	CDC40	P40968	455 aa	Predicted RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	YJR030C	P47101	745 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	BIR1	P47134	954 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	RIB4	P50861	169 aa	Predicted RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	CSI1	Q04368	295 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	DNL4	Q08387	944 aa	Predicted RBP	3.17	□□□□□ -1.9
NHP10	YDL002C	UBA3	Q99344	299 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	RIF1	P29539	1916 aa		3.17	□□□□□ -1.9
NHP10	YDL002C	HEM4	P06174	275 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	RPL18A	P0CX49	186 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	RPL18B	P0CX50	186 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	DCC1	P25559	380 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	RME1	P32338	300 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	BAT1	P38891	393 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	END3	P39013	349 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	HEM14	P40012	539 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	INA22	P40576	216 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	AIP1	P46680	615 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	LSG1	P53145	640 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	SKI8	Q02793	397 aa	Predicted RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	ECM18	Q04623	453 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	YDL109C	Q12103	647 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	PAA1	Q12447	191 aa	Known RBP	3.16	□□□□□ -1.9
NHP10	YDL002C	NAG1	Q8TGN9	163 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	IRA1	P18963	3092 aa		3.16	□□□□□ -1.9
NHP10	YDL002C	HAP2	P06774	265 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	RPL23A	P0CX41	137 aa	Known RBP	3.15	□□□□□ -1.91
NHP10	YDL002C	RPL23B	P0CX42	137 aa	Known RBP	3.15	□□□□□ -1.91
NHP10	YDL002C	RSA4	P25382	515 aa	Known RBP	3.15	□□□□□ -1.91
NHP10	YDL002C	PRR1	P28708	518 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	IML3	P38265	245 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	MMS21	P38632	267 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	TAF6	P53040	516 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	VAC14	Q06708	880 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	RBD2	Q12270	262 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	LAA1	P39526	2014 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	PDR18	P53756	1333 aa		3.15	□□□□□ -1.91
NHP10	YDL002C	RPL43A	P0CX25	92 aa	Known RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	RPL43B	P0CX26	92 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	COQ1	P18900	473 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	AAT2	P23542	418 aa	Known RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	YKL162C	P36052	402 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	SRX1	P36077	127 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	MRPL10	P36520	322 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	RCK2	P38623	610 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	MIG3	P39943	394 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	OXA1	P39952	402 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	YNL208W	P40159	199 aa	Known RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	UTP18	P40362	594 aa	Predicted RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	UTP25	P40498	721 aa	Known RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	GAB1	P41733	394 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	GCD14	P46959	383 aa	Predicted RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	PXR1	P53335	271 aa	Predicted RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	VAC7	P53950	1165 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	SPO19	Q03029	223 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	CWC21	Q03375	135 aa	Known RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	TRM82	Q03774	444 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	RVB1	Q03940	463 aa	Known RBP	3.14	□□□□□ -1.91
NHP10	YDL002C	YET2	Q04210	160 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	BUR2	Q05949	395 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	RRG8	Q06109	277 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	FRE8	Q12209	686 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	SFM1	Q12314	213 aa		3.14	□□□□□ -1.91
NHP10	YDL002C	RPN6	Q12377	434 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms