RNA–Protein interactions for RNA: YBR111W-A

SUS1, Transcript of Component of both the SAGA histone acetylase and TREX-2 complexes, yeastyeast

Gene SUS1, Length 291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUS1YBR111W-A ERD1P16151 362 aa2.23□□□□□ -2.05
SUS1YBR111W-A AGA2P32781 87 aa2.23□□□□□ -2.05
SUS1YBR111W-A SUR1P33300 382 aa2.23□□□□□ -2.05
SUS1YBR111W-A BUD2P33314 1104 aa2.23□□□□□ -2.05
SUS1YBR111W-A YKL162CP36052 402 aa2.23□□□□□ -2.05
SUS1YBR111W-A SWC5P38326 303 aa2.23□□□□□ -2.05
SUS1YBR111W-A YMR262WP38430 313 aa2.23□□□□□ -2.05
SUS1YBR111W-A PET8P38921 284 aa2.23□□□□□ -2.05
SUS1YBR111W-A POP2P39008 433 aa2.23□□□□□ -2.05
SUS1YBR111W-A END3P39013 349 aa2.23□□□□□ -2.05
SUS1YBR111W-A SSO2P39926 295 aa2.23□□□□□ -2.05
SUS1YBR111W-A DSE1P40077 573 aa2.23□□□□□ -2.05
SUS1YBR111W-A YFL040WP43562 540 aa2.23□□□□□ -2.05
SUS1YBR111W-A ZRG17P53735 605 aa2.23□□□□□ -2.05
SUS1YBR111W-A YPL080CQ02826 108 aa2.23□□□□□ -2.05
SUS1YBR111W-A CAB5Q03941 241 aa2.23□□□□□ -2.05
SUS1YBR111W-A VPS20Q04272 221 aa2.23□□□□□ -2.05
SUS1YBR111W-A GMC1Q04399 608 aa2.23□□□□□ -2.05
SUS1YBR111W-A ECM19Q06011 112 aa2.23□□□□□ -2.05
SUS1YBR111W-A YPR195CQ06594 109 aa2.23□□□□□ -2.05
SUS1YBR111W-A REX3Q12090 404 aa2.23□□□□□ -2.05
SUS1YBR111W-A MRPL20P22354 195 aaPredicted RBP2.22□□□□□ -2.05
SUS1YBR111W-A PET18P25362 215 aa2.22□□□□□ -2.05
SUS1YBR111W-A RPB9P27999 122 aa2.22□□□□□ -2.05
SUS1YBR111W-A AST1P35183 429 aa2.22□□□□□ -2.05
SUS1YBR111W-A SLM1P40485 686 aa2.22□□□□□ -2.05
SUS1YBR111W-A SMD1Q02260 146 aaPredicted RBP2.22□□□□□ -2.05
SUS1YBR111W-A IRC4Q03036 179 aa2.22□□□□□ -2.05
SUS1YBR111W-A ABZ2Q03266 374 aa2.22□□□□□ -2.05
SUS1YBR111W-A UBX2Q04228 584 aa2.22□□□□□ -2.05
SUS1YBR111W-A YLR297WQ05899 129 aa2.22□□□□□ -2.05
SUS1YBR111W-A YPS3Q12303 508 aa2.22□□□□□ -2.05
SUS1YBR111W-A STF1P01098 86 aa2.21□□□□□ -2.06
SUS1YBR111W-A CBP2P03874 630 aaPredicted RBP2.21□□□□□ -2.06
SUS1YBR111W-A CPT1P17898 393 aa2.21□□□□□ -2.06
SUS1YBR111W-A ZRT1P32804 376 aa2.21□□□□□ -2.06
SUS1YBR111W-A SLX1P38324 304 aa2.21□□□□□ -2.06
SUS1YBR111W-A YIL054WP40524 105 aa2.21□□□□□ -2.06
SUS1YBR111W-A MIC19P43594 170 aa2.21□□□□□ -2.06
SUS1YBR111W-A CPR7P47103 393 aa2.21□□□□□ -2.06
SUS1YBR111W-A YGL118CP53132 145 aa2.21□□□□□ -2.06
SUS1YBR111W-A OKP1P53298 406 aa2.21□□□□□ -2.06
SUS1YBR111W-A DIB1Q06819 143 aaPredicted RBP2.21□□□□□ -2.06
SUS1YBR111W-A SAM4Q08985 325 aaKnown RBP2.21□□□□□ -2.06
SUS1YBR111W-A RTC5Q12108 567 aaKnown RBP2.21□□□□□ -2.06
SUS1YBR111W-A YPL245WQ12179 454 aaKnown RBP2.21□□□□□ -2.06
SUS1YBR111W-A TRM10Q12400 293 aa2.21□□□□□ -2.06
SUS1YBR111W-A YPR1Q12458 312 aa2.21□□□□□ -2.06
SUS1YBR111W-A BI3Q9ZZW7 517 aa2.21□□□□□ -2.06
SUS1YBR111W-A CUP2P15315 225 aa2.2□□□□□ -2.06
SUS1YBR111W-A YHR035WP38769 630 aa2.2□□□□□ -2.06
SUS1YBR111W-A YDR089WP38966 869 aa2.2□□□□□ -2.06
SUS1YBR111W-A FET3P38993 636 aa2.2□□□□□ -2.06
SUS1YBR111W-A SOP4P39543 234 aaPredicted RBP2.2□□□□□ -2.06
SUS1YBR111W-A OSW5P40219 148 aa2.2□□□□□ -2.06
SUS1YBR111W-A YIL059CP40520 121 aa2.2□□□□□ -2.06
SUS1YBR111W-A COS4P43542 379 aa2.2□□□□□ -2.06
SUS1YBR111W-A CAX4P53223 239 aa2.2□□□□□ -2.06
SUS1YBR111W-A DBP6P53734 629 aaKnown RBP2.2□□□□□ -2.06
SUS1YBR111W-A YNR066CP53752 436 aa2.2□□□□□ -2.06
SUS1YBR111W-A SNX41Q04053 625 aa2.2□□□□□ -2.06
SUS1YBR111W-A VTI1Q04338 217 aa2.2□□□□□ -2.06
SUS1YBR111W-A TFC7Q12415 435 aa2.2□□□□□ -2.06
SUS1YBR111W-A PAA1Q12447 191 aaKnown RBP2.2□□□□□ -2.06
SUS1YBR111W-A CAR2P07991 424 aaKnown RBP2.19□□□□□ -2.06
SUS1YBR111W-A MSS116P15424 664 aaKnown RBP2.19□□□□□ -2.06
SUS1YBR111W-A INO2P26798 304 aa2.19□□□□□ -2.06
SUS1YBR111W-A ASG7P46993 209 aa2.19□□□□□ -2.06
SUS1YBR111W-A RIB4P50861 169 aaPredicted RBP2.19□□□□□ -2.06
SUS1YBR111W-A YMR111CQ04461 462 aaPredicted RBP2.19□□□□□ -2.06
SUS1YBR111W-A PBP4Q07362 185 aaKnown RBP2.19□□□□□ -2.06
SUS1YBR111W-A RFM1Q12192 310 aa2.19□□□□□ -2.06
SUS1YBR111W-A UTP23Q12339 254 aaKnown RBP2.19□□□□□ -2.06
SUS1YBR111W-A GCD2P12754 651 aaPredicted RBP2.18□□□□□ -2.06
SUS1YBR111W-A YGR266WP53326 701 aa2.18□□□□□ -2.06
SUS1YBR111W-A SEC13Q04491 297 aaKnown RBP2.18□□□□□ -2.06
SUS1YBR111W-A YOR292CQ08743 309 aa2.18□□□□□ -2.06
SUS1YBR111W-A VIK1Q12045 647 aa2.18□□□□□ -2.06
SUS1YBR111W-A TDH3P00359 332 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SUS1YBR111W-A GPX1P36014 167 aa2.17□□□□□ -2.06
SUS1YBR111W-A MCH2P36032 473 aa2.17□□□□□ -2.06
SUS1YBR111W-A ASP1P38986 381 aaPredicted RBP2.17□□□□□ -2.06
SUS1YBR111W-A PES4P39684 611 aa2.17□□□□□ -2.06
SUS1YBR111W-A CUR1Q06469 252 aa2.17□□□□□ -2.06
SUS1YBR111W-A APC9Q12107 265 aa2.17□□□□□ -2.06
SUS1YBR111W-A MDY2Q12285 212 aa2.17□□□□□ -2.06
SUS1YBR111W-A PRP46Q12417 451 aaPredicted RBP2.17□□□□□ -2.06
SUS1YBR111W-A LAG2Q92325 660 aa2.17□□□□□ -2.06
SUS1YBR111W-A RAD7P06779 565 aa2.16□□□□□ -2.06
SUS1YBR111W-A RPL16BP26785 198 aaKnown RBP2.16□□□□□ -2.06
SUS1YBR111W-A IME2P32581 645 aa2.16□□□□□ -2.06
SUS1YBR111W-A YBR062CP38239 180 aa2.16□□□□□ -2.06
SUS1YBR111W-A YPC1P38298 316 aa2.16□□□□□ -2.06
SUS1YBR111W-A MNN9P39107 395 aaKnown RBP2.16□□□□□ -2.06
SUS1YBR111W-A EDC2P40023 145 aaPredicted RBP2.16□□□□□ -2.06
SUS1YBR111W-A CDC40P40968 455 aaPredicted RBP2.16□□□□□ -2.06
SUS1YBR111W-A SWC4P53201 476 aa2.16□□□□□ -2.06
SUS1YBR111W-A VOA1P53262 265 aa2.16□□□□□ -2.06
SUS1YBR111W-A ACT1P60010 375 aaKnown RBP2.16□□□□□ -2.06
SUS1YBR111W-A YDR222WQ04925 415 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 52.8 ms