RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C LDB16P25587 256 aa2.6□□□□□ -1.99
RPC40YPR110C CDC50P25656 391 aa2.6□□□□□ -1.99
RPC40YPR110C DEP1P31385 405 aa2.6□□□□□ -1.99
RPC40YPR110C RPS0AP32905 252 aaKnown RBP2.6□□□□□ -1.99
RPC40YPR110C PCH2P38126 564 aa2.6□□□□□ -1.99
RPC40YPR110C YPT35P38815 214 aaKnown RBP2.6□□□□□ -1.99
RPC40YPR110C OSW5P40219 148 aa2.6□□□□□ -1.99
RPC40YPR110C YCH1P42937 148 aa2.6□□□□□ -1.99
RPC40YPR110C YJR030CP47101 745 aa2.6□□□□□ -1.99
RPC40YPR110C SHE10P53075 577 aa2.6□□□□□ -1.99
RPC40YPR110C VAC7P53950 1165 aa2.6□□□□□ -1.99
RPC40YPR110C YMR010WQ03687 405 aa2.6□□□□□ -1.99
RPC40YPR110C CSM3Q04659 317 aa2.6□□□□□ -1.99
RPC40YPR110C ALE1Q08548 619 aa2.6□□□□□ -1.99
RPC40YPR110C HMS1Q12398 434 aa2.6□□□□□ -1.99
RPC40YPR110C NUP188P52593 1655 aaKnown RBP2.6□□□□□ -1.99
RPC40YPR110C VMR1P38735 1592 aa2.59□□□□□ -1.99
RPC40YPR110C PRB1P09232 635 aa2.59□□□□□ -1.99
RPC40YPR110C GCD2P12754 651 aaPredicted RBP2.59□□□□□ -1.99
RPC40YPR110C ZRC1P20107 442 aa2.59□□□□□ -1.99
RPC40YPR110C CIN8P27895 1000 aa2.59□□□□□ -1.99
RPC40YPR110C LDS1P31379 325 aa2.59□□□□□ -1.99
RPC40YPR110C RCK2P38623 610 aa2.59□□□□□ -1.99
RPC40YPR110C MMS21P38632 267 aa2.59□□□□□ -1.99
RPC40YPR110C ALD5P40047 520 aaKnown RBP2.59□□□□□ -1.99
RPC40YPR110C DFG10P40526 253 aa2.59□□□□□ -1.99
RPC40YPR110C NAS6P50086 228 aa2.59□□□□□ -1.99
RPC40YPR110C TRM82Q03774 444 aa2.59□□□□□ -1.99
RPC40YPR110C TMC1Q08422 150 aaPredicted RBP2.59□□□□□ -1.99
RPC40YPR110C ATP16Q12165 160 aa2.59□□□□□ -1.99
RPC40YPR110C MDY2Q12285 212 aa2.59□□□□□ -1.99
RPC40YPR110C SPO24Q3E752 67 aa2.59□□□□□ -1.99
RPC40YPR110C PDR5P33302 1511 aaKnown RBP2.58□□□□□ -2
RPC40YPR110C DNF3Q12674 1656 aa2.58□□□□□ -2
RPC40YPR110C VPS63O13549 108 aa2.58□□□□□ -2
RPC40YPR110C SDS24P38314 527 aa2.58□□□□□ -2
RPC40YPR110C TIM17P39515 158 aa2.58□□□□□ -2
RPC40YPR110C AIM20P40451 204 aa2.58□□□□□ -2
RPC40YPR110C SEH1P53011 349 aaKnown RBP2.58□□□□□ -2
RPC40YPR110C LSG1P53145 640 aaKnown RBP2.58□□□□□ -2
RPC40YPR110C VHT1P53241 593 aa2.58□□□□□ -2
RPC40YPR110C GIS2P53849 153 aaKnown RBP RIP-Chip data2.58□□□□□ -2 RIP-Chip
RPC40YPR110C PRP38Q00723 242 aaPredicted RBP2.58□□□□□ -2
RPC40YPR110C CUR1Q06469 252 aa2.58□□□□□ -2
RPC40YPR110C FRE8Q12209 686 aa2.58□□□□□ -2
RPC40YPR110C IML1P47170 1584 aa2.57□□□□□ -2
RPC40YPR110C RPL18AP0CX49 186 aaKnown RBP2.57□□□□□ -2
RPC40YPR110C RPL18BP0CX50 186 aaKnown RBP2.57□□□□□ -2
RPC40YPR110C UNG1P12887 359 aa2.57□□□□□ -2
RPC40YPR110C MIR1P23641 311 aaKnown RBP2.57□□□□□ -2
RPC40YPR110C VMA5P31412 392 aaKnown RBP2.57□□□□□ -2
RPC40YPR110C ACB1P31787 87 aa2.57□□□□□ -2
RPC40YPR110C MYO3P36006 1272 aa2.57□□□□□ -2
RPC40YPR110C IML3P38265 245 aa2.57□□□□□ -2
RPC40YPR110C MNN9P39107 395 aaKnown RBP2.57□□□□□ -2
RPC40YPR110C HEM14P40012 539 aa2.57□□□□□ -2
RPC40YPR110C CDC40P40968 455 aaPredicted RBP2.57□□□□□ -2
RPC40YPR110C TAF6P53040 516 aa2.57□□□□□ -2
RPC40YPR110C SUR7P54003 302 aa2.57□□□□□ -2
RPC40YPR110C ABZ2Q03266 374 aa2.57□□□□□ -2
RPC40YPR110C TSA2Q04120 196 aa2.57□□□□□ -2
RPC40YPR110C FSH2Q05015 223 aa2.57□□□□□ -2
RPC40YPR110C RPN6Q12377 434 aa2.57□□□□□ -2
RPC40YPR110C HSP26P15992 214 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
RPC40YPR110C PMT2P31382 759 aa2.56□□□□□ -2
RPC40YPR110C YPS1P32329 569 aa2.56□□□□□ -2
RPC40YPR110C SHE1P38200 338 aa2.56□□□□□ -2
RPC40YPR110C SWC5P38326 303 aa2.56□□□□□ -2
RPC40YPR110C PFS1P38872 237 aa2.56□□□□□ -2
RPC40YPR110C UTP25P40498 721 aaKnown RBP2.56□□□□□ -2
RPC40YPR110C INA22P40576 216 aa2.56□□□□□ -2
RPC40YPR110C TIS11P47977 285 aa2.56□□□□□ -2
RPC40YPR110C PXR1P53335 271 aaPredicted RBP2.56□□□□□ -2
RPC40YPR110C ARP5P53946 755 aa2.56□□□□□ -2
RPC40YPR110C ENT5Q03769 411 aaKnown RBP2.56□□□□□ -2
RPC40YPR110C RVB1Q03940 463 aaKnown RBP2.56□□□□□ -2
RPC40YPR110C CAB5Q03941 241 aa2.56□□□□□ -2
RPC40YPR110C YLR297WQ05899 129 aa2.56□□□□□ -2
RPC40YPR110C LIP2Q06005 328 aa2.56□□□□□ -2
RPC40YPR110C GAS2Q06135 555 aa2.56□□□□□ -2
RPC40YPR110C YLR177WQ06251 628 aa2.56□□□□□ -2
RPC40YPR110C DNL4Q08387 944 aaPredicted RBP2.56□□□□□ -2
RPC40YPR110C APC2Q12440 853 aa2.56□□□□□ -2
RPC40YPR110C PAA1Q12447 191 aaKnown RBP2.56□□□□□ -2
RPC40YPR110C DBP3P20447 523 aaKnown RBP2.55□□□□□ -2
RPC40YPR110C RBK1P25332 333 aa2.55□□□□□ -2
RPC40YPR110C GPI18P38211 433 aa2.55□□□□□ -2
RPC40YPR110C END3P39013 349 aa2.55□□□□□ -2
RPC40YPR110C PCL7P40186 285 aa2.55□□□□□ -2
RPC40YPR110C MOB2P43563 287 aa2.55□□□□□ -2
RPC40YPR110C IGD1P43598 195 aa2.55□□□□□ -2
RPC40YPR110C YFR018CP43599 363 aa2.55□□□□□ -2
RPC40YPR110C AIM23P47015 356 aa2.55□□□□□ -2
RPC40YPR110C YGR015CP53208 328 aa2.55□□□□□ -2
RPC40YPR110C DBP6P53734 629 aaKnown RBP2.55□□□□□ -2
RPC40YPR110C ERV25P54837 211 aaKnown RBP2.55□□□□□ -2
RPC40YPR110C SLT2Q00772 484 aa2.55□□□□□ -2
RPC40YPR110C SAL1D6W196 494 aa2.54□□□□□ -2
RPC40YPR110C COX4P04037 155 aa2.54□□□□□ -2
RPC40YPR110C DAL80P26343 269 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms