RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W OST6Q03723 332 aa5.09□□□□□ -1.59
PDH1YPR002W YDR249CQ03787 373 aa5.09□□□□□ -1.59
PDH1YPR002W ARG7Q04728 441 aa5.09□□□□□ -1.59
PDH1YPR002W RSF1Q05043 376 aa5.09□□□□□ -1.59
PDH1YPR002W PDR8Q06149 701 aa5.09□□□□□ -1.59
PDH1YPR002W SSK1Q07084 712 aa5.09□□□□□ -1.59
PDH1YPR002W RRP12Q12754 1228 aaKnown RBP5.09□□□□□ -1.59
PDH1YPR002W YGR161W-CQ3E744 92 aa5.09□□□□□ -1.59
PDH1YPR002W QCR7P00128 127 aa5.08□□□□□ -1.6
PDH1YPR002W ADE8P04161 214 aa5.08□□□□□ -1.6
PDH1YPR002W PRP28P23394 588 aa5.08□□□□□ -1.6
PDH1YPR002W CNB1P25296 175 aa5.08□□□□□ -1.6
PDH1YPR002W CDC12P32468 407 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W VMA8P32610 256 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W GMH1P36125 273 aa5.08□□□□□ -1.6
PDH1YPR002W YKR073CP36153 106 aa5.08□□□□□ -1.6
PDH1YPR002W APL3P38065 1025 aa5.08□□□□□ -1.6
PDH1YPR002W GRE3P38715 327 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
PDH1YPR002W PTI1P39927 425 aaPredicted RBP5.08□□□□□ -1.6
PDH1YPR002W YEL068CP39977 110 aa5.08□□□□□ -1.6
PDH1YPR002W HEM14P40012 539 aa5.08□□□□□ -1.6
PDH1YPR002W PKP1P40530 394 aa5.08□□□□□ -1.6
PDH1YPR002W AZF1P41696 914 aa5.08□□□□□ -1.6
PDH1YPR002W SCS7Q03529 384 aa5.08□□□□□ -1.6
PDH1YPR002W YMR130WQ04223 302 aa5.08□□□□□ -1.6
PDH1YPR002W GAD1Q04792 585 aa5.08□□□□□ -1.6
PDH1YPR002W BOP2Q06150 570 aa5.08□□□□□ -1.6
PDH1YPR002W SYC1Q08553 188 aaPredicted RBP5.08□□□□□ -1.6
PDH1YPR002W PSF1Q12488 208 aa5.08□□□□□ -1.6
PDH1YPR002W YGL194C-AQ2V2P6 80 aa5.08□□□□□ -1.6
PDH1YPR002W HRP1Q99383 534 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W MSB2P32334 1306 aa5.08□□□□□ -1.6
PDH1YPR002W GCN4P03069 281 aa5.08□□□□□ -1.6
PDH1YPR002W YOL163WP0CF20 169 aa5.08□□□□□ -1.6
PDH1YPR002W ZWF1P11412 505 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W REV1P12689 985 aa5.08□□□□□ -1.6
PDH1YPR002W RED1P14291 827 aa5.08□□□□□ -1.6
PDH1YPR002W ERD2P18414 219 aa5.08□□□□□ -1.6
PDH1YPR002W UTR1P21373 530 aa5.08□□□□□ -1.6
PDH1YPR002W PDE1P22434 369 aa5.08□□□□□ -1.6
PDH1YPR002W AHC2P25649 128 aa5.08□□□□□ -1.6
PDH1YPR002W CBT1P36038 271 aaPredicted RBP5.08□□□□□ -1.6
PDH1YPR002W ANR2P36090 516 aaPredicted RBP5.08□□□□□ -1.6
PDH1YPR002W ECM31P38122 312 aa5.08□□□□□ -1.6
PDH1YPR002W IFA38P38286 347 aa5.08□□□□□ -1.6
PDH1YPR002W HTD2P38790 280 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W AIM2P39721 246 aa5.08□□□□□ -1.6
PDH1YPR002W FMC1P40491 155 aa5.08□□□□□ -1.6
PDH1YPR002W PRM10P42946 383 aa5.08□□□□□ -1.6
PDH1YPR002W PAM16P42949 149 aa5.08□□□□□ -1.6
PDH1YPR002W RPS12P48589 143 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W NUP57P48837 541 aa5.08□□□□□ -1.6
PDH1YPR002W SWC4P53201 476 aa5.08□□□□□ -1.6
PDH1YPR002W MTL1P53214 551 aa5.08□□□□□ -1.6
PDH1YPR002W DUS1P53759 423 aaKnown RBP5.08□□□□□ -1.6
PDH1YPR002W COS1P53822 381 aa5.08□□□□□ -1.6
PDH1YPR002W MTQ1P53944 314 aa5.08□□□□□ -1.6
PDH1YPR002W PNG1Q02890 363 aa5.08□□□□□ -1.6
PDH1YPR002W PRM15Q03262 622 aa5.08□□□□□ -1.6
PDH1YPR002W HLR1Q04429 423 aa5.08□□□□□ -1.6
PDH1YPR002W YMR310CQ04867 317 aaPredicted RBP5.08□□□□□ -1.6
PDH1YPR002W CDA2Q06703 312 aa5.08□□□□□ -1.6
PDH1YPR002W FEX1Q08913 375 aa5.08□□□□□ -1.6
PDH1YPR002W AEP3Q12089 606 aa5.08□□□□□ -1.6
PDH1YPR002W APC2Q12440 853 aa5.08□□□□□ -1.6
PDH1YPR002W HBN1Q96VH4 193 aa5.08□□□□□ -1.6
PDH1YPR002W YBR085C-AO43137 85 aa5.07□□□□□ -1.6
PDH1YPR002W PEP4P07267 405 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W RPS18AP0CX55 146 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W RPS18BP0CX56 146 aaPredicted RBP5.07□□□□□ -1.6
PDH1YPR002W ERD1P16151 362 aa5.07□□□□□ -1.6
PDH1YPR002W SNF6P18888 332 aa5.07□□□□□ -1.6
PDH1YPR002W ACB1P31787 87 aa5.07□□□□□ -1.6
PDH1YPR002W NTH1P32356 751 aa5.07□□□□□ -1.6
PDH1YPR002W KRE6P32486 720 aa5.07□□□□□ -1.6
PDH1YPR002W PUB1P32588 453 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
PDH1YPR002W MGM101P32787 269 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W SFC1P33303 322 aa5.07□□□□□ -1.6
PDH1YPR002W TEF4P36008 412 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W UIP5P36137 443 aa5.07□□□□□ -1.6
PDH1YPR002W GIC1P38785 314 aa5.07□□□□□ -1.6
PDH1YPR002W LSM12P38828 187 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W LSM5P40089 93 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W LYS12P40495 371 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W APQ12P40532 138 aa5.07□□□□□ -1.6
PDH1YPR002W MET28P40573 187 aa5.07□□□□□ -1.6
PDH1YPR002W LSM1P47017 172 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W FOL2P51601 243 aaKnown RBP5.07□□□□□ -1.6
PDH1YPR002W VEL1P53058 206 aa5.07□□□□□ -1.6
PDH1YPR002W MNT4P53745 580 aa5.07□□□□□ -1.6
PDH1YPR002W HXT11P54862 567 aa5.07□□□□□ -1.6
PDH1YPR002W MSC1Q03104 513 aa5.07□□□□□ -1.6
PDH1YPR002W IPK1Q06667 281 aa5.07□□□□□ -1.6
PDH1YPR002W FEX2Q08991 375 aa5.07□□□□□ -1.6
PDH1YPR002W TIR4Q12218 487 aaPredicted RBP5.07□□□□□ -1.6
PDH1YPR002W RKM5Q12367 367 aa5.07□□□□□ -1.6
PDH1YPR002W PCL9Q12477 304 aa5.07□□□□□ -1.6
PDH1YPR002W YLR099W-AQ3E798 87 aa5.07□□□□□ -1.6
PDH1YPR002W ARG80P07249 177 aa5.06□□□□□ -1.6
PDH1YPR002W STE12P13574 688 aa5.06□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms