RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	MPC1	P53157	130 aa	Known RBP	5.12	□□□□□ -1.59
HFI1	YPL254W	SYF2	P53277	215 aa	Predicted RBP	5.12	□□□□□ -1.59
HFI1	YPL254W	PRM1	P53835	661 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	TPS1	Q00764	495 aa	Known RBP	5.12	□□□□□ -1.59
HFI1	YPL254W	ATG21	Q02887	496 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	MSC1	Q03104	513 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	VHS1	Q03785	461 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	ARX1	Q03862	593 aa	Known RBP	5.12	□□□□□ -1.59
HFI1	YPL254W	RRT8	Q08219	342 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	SIA1	Q12212	622 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	GTT2	Q12390	233 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	YOR338W	Q99326	363 aa		5.12	□□□□□ -1.59
HFI1	YPL254W	MTF1	P14908	341 aa	Known RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	SAR1	P20606	190 aa	Known RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	EPT1	P22140	391 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	OAC1	P32332	324 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	ASF2	P32448	525 aa	Predicted RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	ZTA1	P38230	334 aa	Known RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	RPH1	P39956	796 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	YJL218W	P40892	196 aa	Known RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	SWC4	P53201	476 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	YPL108W	Q02872	168 aa	Predicted RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	YML122C	Q03207	126 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	RNH1	Q04740	348 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	CLP1	Q08685	445 aa	Predicted RBP	5.11	□□□□□ -1.59
HFI1	YPL254W	ATG29	Q12092	213 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	YPR1	Q12458	312 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	MRX4	Q12467	430 aa		5.11	□□□□□ -1.59
HFI1	YPL254W	UBR1	P19812	1950 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	BUD5	P25300	642 aa	Predicted RBP	5.1	□□□□□ -1.59
HFI1	YPL254W	SLM5	P25345	492 aa	Known RBP	5.1	□□□□□ -1.59
HFI1	YPL254W	SSO1	P32867	290 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	YPT52	P36018	234 aa	Known RBP	5.1	□□□□□ -1.59
HFI1	YPL254W	YHR177W	P38867	453 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	AIM10	P39965	576 aa	Known RBP	5.1	□□□□□ -1.59
HFI1	YPL254W	PUG1	P40100	303 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	SER33	P40510	469 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	STE24	P47154	453 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	MPS2	P53159	387 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	YGR079W	P53249	370 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	MKC7	P53379	596 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	GOR1	P53839	350 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	YPL071C	Q02864	156 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	TRM82	Q03774	444 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	SEG1	Q04279	960 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	YMR087W	Q04299	284 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	SWF1	Q04629	336 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	CYK3	Q07533	885 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	TEN1	Q07921	160 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	RRG7	Q08774	242 aa	Predicted RBP	5.1	□□□□□ -1.59
HFI1	YPL254W	NMD4	Q12129	218 aa		5.1	□□□□□ -1.59
HFI1	YPL254W	CPA1	P07258	411 aa	Known RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	TAH1	P25638	111 aa	Predicted RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	MKK1	P32490	508 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	TUL1	P36096	758 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	RPF2	P36160	344 aa	Known RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	YBR137W	P38276	179 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	FAU1	P40099	211 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	VRG4	P40107	337 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	YGR210C	P42942	411 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	PAM16	P42949	149 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	YFR020W	P43600	232 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	SGF73	P53165	657 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	YPL014W	Q02606	381 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	OAZ1	Q02803	292 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	YMR178W	Q03219	274 aa	Known RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	RPC11	Q04307	110 aa	Predicted RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	PLM2	Q04383	521 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	EMI2	Q04409	500 aa	Known RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	YMR034C	Q05131	434 aa	Predicted RBP	5.09	□□□□□ -1.59
HFI1	YPL254W	PLB3	Q08108	686 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	TRM8	Q12009	286 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	SUL2	Q12325	893 aa		5.09	□□□□□ -1.59
HFI1	YPL254W	PDE2	P06776	526 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	TFS1	P14306	219 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	RPS1B	P23248	255 aa	Known RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	RRP7	P25368	297 aa	Predicted RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	RFA2	P26754	273 aa	Known RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	RSM22	P36056	628 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	APD1	P38281	316 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	MDM31	P38880	579 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	NVJ1	P38881	321 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	AIM2	P39721	246 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	HEM14	P40012	539 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	LYS12	P40495	371 aa	Known RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	PAC11	P40960	533 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	ERG10	P41338	398 aa	Known RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	YGR201C	P42936	225 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	IRC18	P47056	224 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	LSG1	P53145	640 aa	Known RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	COG7	P53195	279 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	ATP23	P53722	227 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	MRPL50	P53724	139 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	RIM13	Q03792	727 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	RNH202	Q05635	350 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	RAX1	Q08760	435 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	MDM32	Q12171	622 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	RDL1	Q12305	139 aa	Known RBP	5.08	□□□□□ -1.6
HFI1	YPL254W	FMP16	Q12497	93 aa		5.08	□□□□□ -1.6
HFI1	YPL254W	SUS1	Q6WNK7	96 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms