RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C BTT1P40314 149 aaPredicted RBP2.96□□□□□ -1.94
LCB4YOR171C COA1P40452 197 aa2.96□□□□□ -1.94
LCB4YOR171C HOC1P47124 396 aa2.96□□□□□ -1.94
LCB4YOR171C LYS20P48570 428 aaKnown RBP2.96□□□□□ -1.94
LCB4YOR171C NAS6P50086 228 aa2.96□□□□□ -1.94
LCB4YOR171C NIF3P53081 288 aa2.96□□□□□ -1.94
LCB4YOR171C CWC25P53854 179 aaKnown RBP2.96□□□□□ -1.94
LCB4YOR171C DML1Q03652 475 aa2.96□□□□□ -1.94
LCB4YOR171C BCH1Q05029 724 aa2.96□□□□□ -1.94
LCB4YOR171C YET3Q07451 203 aa2.96□□□□□ -1.94
LCB4YOR171C YPL199CQ08954 240 aa2.96□□□□□ -1.94
LCB4YOR171C RRP42Q12277 265 aaPredicted RBP2.96□□□□□ -1.94
LCB4YOR171C AIM45Q12480 344 aaKnown RBP2.96□□□□□ -1.94
LCB4YOR171C WIP1Q2V2P8 89 aa2.96□□□□□ -1.94
LCB4YOR171C RPP0P05317 312 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C MRP1P10662 321 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C RPL4AP10664 362 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C UBC8P28263 218 aa2.95□□□□□ -1.94
LCB4YOR171C TRR1P29509 319 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C SEC1P30619 724 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C MDH3P32419 343 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
LCB4YOR171C NRP1P32770 719 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
LCB4YOR171C DRE2P36152 348 aa2.95□□□□□ -1.94
LCB4YOR171C QDR3P38227 689 aa2.95□□□□□ -1.94
LCB4YOR171C SHE3P38272 425 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C LCP5P40079 357 aaPredicted RBP2.95□□□□□ -1.94
LCB4YOR171C YER186CP40101 306 aa2.95□□□□□ -1.94
LCB4YOR171C SNL1P40548 159 aa2.95□□□□□ -1.94
LCB4YOR171C YDL186WP48568 277 aa2.95□□□□□ -1.94
LCB4YOR171C RPL4BP49626 362 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C YGL108CP53139 140 aa2.95□□□□□ -1.94
LCB4YOR171C GPI1P53306 609 aa2.95□□□□□ -1.94
LCB4YOR171C YNR066CP53752 436 aa2.95□□□□□ -1.94
LCB4YOR171C TRM82Q03774 444 aa2.95□□□□□ -1.94
LCB4YOR171C SAM4Q08985 325 aaKnown RBP2.95□□□□□ -1.94
LCB4YOR171C SPT3P06844 337 aa2.94□□□□□ -1.94
LCB4YOR171C SNF3P10870 884 aa2.94□□□□□ -1.94
LCB4YOR171C PUP3P25451 205 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C TIP20P33891 701 aa2.94□□□□□ -1.94
LCB4YOR171C CSG2P35206 410 aa2.94□□□□□ -1.94
LCB4YOR171C YKL162CP36052 402 aa2.94□□□□□ -1.94
LCB4YOR171C ANR2P36090 516 aaPredicted RBP2.94□□□□□ -1.94
LCB4YOR171C NPT1P39683 429 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C YAT2P40017 923 aa2.94□□□□□ -1.94
LCB4YOR171C HPM1P40481 377 aa2.94□□□□□ -1.94
LCB4YOR171C GDS1P41913 522 aa2.94□□□□□ -1.94
LCB4YOR171C MOG1P47123 218 aa2.94□□□□□ -1.94
LCB4YOR171C YJR141WP47172 347 aaPredicted RBP2.94□□□□□ -1.94
LCB4YOR171C YPT32P51996 222 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C TMA20P89886 181 aaPredicted RBP2.94□□□□□ -1.94
LCB4YOR171C RSC9Q03124 581 aa2.94□□□□□ -1.94
LCB4YOR171C YOL159CQ08300 171 aa2.94□□□□□ -1.94
LCB4YOR171C PFA4Q12006 378 aa2.94□□□□□ -1.94
LCB4YOR171C NSL1Q12143 216 aa2.94□□□□□ -1.94
LCB4YOR171C SIA1Q12212 622 aa2.94□□□□□ -1.94
LCB4YOR171C YLR361C-AQ3E795 98 aa2.94□□□□□ -1.94
LCB4YOR171C YKL068W-AQ3E826 78 aa2.94□□□□□ -1.94
LCB4YOR171C CDC8P00572 216 aa2.94□□□□□ -1.94
LCB4YOR171C ADE4P04046 510 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C DST1P07273 309 aa2.94□□□□□ -1.94
LCB4YOR171C DPM1P14020 267 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C URA6P15700 204 aa2.94□□□□□ -1.94
LCB4YOR171C CPT1P17898 393 aa2.94□□□□□ -1.94
LCB4YOR171C URE2P23202 354 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C ELO2P25358 347 aa2.94□□□□□ -1.94
LCB4YOR171C ACH1P32316 526 aa2.94□□□□□ -1.94
LCB4YOR171C IES6P32617 166 aa2.94□□□□□ -1.94
LCB4YOR171C RGT1P32862 1170 aa2.94□□□□□ -1.94
LCB4YOR171C RIB5P38145 238 aa2.94□□□□□ -1.94
LCB4YOR171C RRN10P38204 145 aa2.94□□□□□ -1.94
LCB4YOR171C STP2P38704 541 aa2.94□□□□□ -1.94
LCB4YOR171C RRP3P38712 501 aaKnown RBP2.94□□□□□ -1.94
LCB4YOR171C ATG7P38862 630 aa2.94□□□□□ -1.94
LCB4YOR171C PAC11P40960 533 aa2.94□□□□□ -1.94
LCB4YOR171C FAR3P46671 204 aa2.94□□□□□ -1.94
LCB4YOR171C PHO86P46956 311 aa2.94□□□□□ -1.94
LCB4YOR171C ORC5P50874 479 aa2.94□□□□□ -1.94
LCB4YOR171C YGR168CP53293 376 aa2.94□□□□□ -1.94
LCB4YOR171C DYN2Q02647 92 aa2.94□□□□□ -1.94
LCB4YOR171C OST6Q03723 332 aa2.94□□□□□ -1.94
LCB4YOR171C YMR087WQ04299 284 aa2.94□□□□□ -1.94
LCB4YOR171C GLO2Q05584 274 aa2.94□□□□□ -1.94
LCB4YOR171C COQ9Q05779 260 aa2.94□□□□□ -1.94
LCB4YOR171C MDM30Q05930 598 aa2.94□□□□□ -1.94
LCB4YOR171C MRPL51Q06090 140 aaPredicted RBP2.94□□□□□ -1.94
LCB4YOR171C PLB3Q08108 686 aa2.94□□□□□ -1.94
LCB4YOR171C BBP1Q12365 385 aa2.94□□□□□ -1.94
LCB4YOR171C RKM5Q12367 367 aa2.94□□□□□ -1.94
LCB4YOR171C AGC1Q12482 902 aa2.94□□□□□ -1.94
LCB4YOR171C YER145C-AA0A023PYF4 145 aa2.93□□□□□ -1.94
LCB4YOR171C RIP1P08067 215 aa2.93□□□□□ -1.94
LCB4YOR171C CHO1P08456 276 aa2.93□□□□□ -1.94
LCB4YOR171C RPB8P20436 146 aa2.93□□□□□ -1.94
LCB4YOR171C EHD3P28817 500 aa2.93□□□□□ -1.94
LCB4YOR171C MSK1P32048 576 aa2.93□□□□□ -1.94
LCB4YOR171C GSP1P32835 219 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C GSP2P32836 220 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C SUI1P32911 108 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C RPS1AP33442 255 aaKnown RBP2.93□□□□□ -1.94
LCB4YOR171C SOF1P33750 489 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms