RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	GDS1	P41913	522 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SIP4	P46954	829 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	TRM9	P49957	279 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	GND2	P53319	492 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SKS1	Q12505	502 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	CTF3	Q12748	733 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	PHO5	P00635	467 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	GAL80	P04387	435 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	HIP1	P06775	603 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	CDC21	P06785	304 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SEC12	P11655	471 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	GLK1	P17709	500 aa	Known RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	PHO80	P20052	293 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	CKS1	P20486	150 aa	Known RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	YHL026C	P38740	315 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	GEP4	P38812	185 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	UBA4	P38820	440 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SDP1	P40479	209 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	YIR016W	P40572	265 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	MET28	P40573	187 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	AAD14	P42884	376 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	AIM24	P47127	394 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	YGL159W	P53110	370 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SWF1	Q04629	336 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	PUS9	Q12069	462 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	DIN7	Q12086	430 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	TY1A-NL1	Q12391	440 aa	Known RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	HTA1	P04911	132 aa	Known RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	TRP4	P07285	380 aa	Predicted RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	ERD1	P16151	362 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	UTR1	P21373	530 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	ORC2	P32833	620 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	VRP1	P37370	817 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	APL3	P38065	1025 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	BMT2	P38278	337 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	PFA3	P42836	336 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	CIN2	P46670	268 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	NIT2	P47016	307 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	YJR111C	P47148	283 aa	Known RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	ROG1	P53118	685 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	YLR173W	Q06247	608 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	TIP1	P27654	210 aa	Predicted RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	YCR087C-A	P37263	153 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SHE1	P38200	338 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	ZTA1	P38230	334 aa	Known RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	NTA1	P40354	457 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	PGD1	P40356	397 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	CAT5	P41735	233 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	LOC1	P43586	204 aa	Predicted RBP	3.76	□□□□□ -1.81
ATG2	YNL242W	TIS11	P47977	285 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	PHB2	P50085	310 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	SHY1	P53266	389 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	MKC7	P53379	596 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	TPO3	Q06451	622 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	TMS1	Q12116	473 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	WIP1	Q2V2P8	89 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	MPD2	Q99316	277 aa		3.76	□□□□□ -1.81
ATG2	YNL242W	KIN28	P06242	306 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	ZWF1	P11412	505 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	HOM2	P13663	365 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	STE4	P18851	423 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	MRPL44	P19956	98 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
ATG2	YNL242W	SCM4	P32564	187 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	MTC2	P34246	357 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	FLO10	P36170	1169 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	SOL2	P37262	315 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	GLC8	P41818	229 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	COQ6	P53318	479 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	YNR062C	P53748	327 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	AAT1	Q01802	451 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	GUD1	Q07729	489 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	RRT8	Q08219	342 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	RRP40	Q08285	240 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	RRP42	Q12277	265 aa	Predicted RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	FUN14	P18411	198 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	MTH1	P35198	433 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	MTC4	P38335	694 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	TAT2	P38967	592 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	YGR201C	P42936	225 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	DPB11	P47027	764 aa	Predicted RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	YHC3	P47040	408 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	NUP42	P49686	430 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	COG7	P53195	279 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	MRPS16	Q02608	121 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	SNO1	Q03144	224 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	YOL019W	Q08157	551 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	YOR365C	Q08844	703 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	SPC3	Q12133	184 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	YPR011C	Q12251	326 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	RTN2	Q12443	393 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	NAM2	P11325	894 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	ERD2	P18414	219 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	ATG15	P25641	520 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	MCM10	P32354	571 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	POP7	P38291	140 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	CHL4	P38907	458 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	ALP1	P38971	573 aa		3.75	□□□□□ -1.81
ATG2	YNL242W	PTC2	P39966	464 aa	Known RBP	3.75	□□□□□ -1.81
ATG2	YNL242W	YJL171C	P46992	396 aa		3.75	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms