RNA–Protein interactions for RNA: YMR284W

YKU70, Transcript of Subunit of the telomeric Ku complex (Yku70p-Yku80p), yeast

Gene YKU70, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKU70	YMR284W	LSM4	P40070	187 aa	Known RBP	0.27	□□□□□ -2.37
YKU70	YMR284W	LSM5	P40089	93 aa	Known RBP	0.27	□□□□□ -2.37
YKU70	YMR284W	TCB2	P48231	1178 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	AQR1	P53943	586 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	TAF10	Q12030	206 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	TY3A-G	Q12173	290 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	TY3A-I	Q99219	290 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	DAP2	P18962	818 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	CPR2	P23285	205 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	PRE7	P23724	241 aa	Known RBP	0.27	□□□□□ -2.37
YKU70	YMR284W	SCO1	P23833	295 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	CAB3	P36076	571 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	PCH2	P38126	564 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	DSE1	P40077	573 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	PIR5	P46999	287 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	YJL027C	P47063	138 aa	Predicted RBP	0.27	□□□□□ -2.37
YKU70	YMR284W	TPC1	P53257	314 aa		0.27	□□□□□ -2.37
YKU70	YMR284W	RRB1	Q04225	511 aa	Known RBP	0.27	□□□□□ -2.37
YKU70	YMR284W	YOL163W	P0CF20	169 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	CSE1	P33307	960 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	SPP381	P38282	291 aa	Predicted RBP	0.26	□□□□□ -2.37
YKU70	YMR284W	LCB2	P40970	561 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	YJR146W	P47174	117 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	LSG1	P53145	640 aa	Known RBP	0.26	□□□□□ -2.37
YKU70	YMR284W	MEH1	Q02205	184 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	YDR541C	Q03049	344 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	ERB1	Q04660	807 aa	Known RBP	0.26	□□□□□ -2.37
YKU70	YMR284W	SUE1	Q06524	206 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	UAF30	Q08747	228 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	TRM10	Q12400	293 aa		0.26	□□□□□ -2.37
YKU70	YMR284W	MNL1	P38888	796 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	YNL320W	P42840	284 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	EPL1	P43572	832 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	SDS23	P53172	527 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	YLR287C	Q05881	355 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	NDL1	Q06568	189 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	TIM22	Q12328	207 aa		0.25	□□□□□ -2.37
YKU70	YMR284W	YAK1	P14680	807 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	VAM7	P32912	316 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	KAP104	P38217	918 aa	Known RBP	0.24	□□□□□ -2.37
YKU70	YMR284W	NDE1	P40215	560 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	YGR111W	P53265	400 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	YOL075C	Q08234	1294 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	DCP1	Q12517	231 aa	Predicted RBP	0.24	□□□□□ -2.37
YKU70	YMR284W	MHP1	P43638	1398 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	YKL187C	P34231	750 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	SRP72	P38688	640 aa	Known RBP	0.24	□□□□□ -2.37
YKU70	YMR284W	UFD1	P53044	361 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	ERP3	Q12403	225 aa		0.24	□□□□□ -2.37
YKU70	YMR284W	RPL26A	P05743	127 aa	Known RBP	0.23	□□□□□ -2.37
YKU70	YMR284W	RPL26B	P53221	127 aa	Known RBP	0.23	□□□□□ -2.37
YKU70	YMR284W	RPN6	Q12377	434 aa		0.23	□□□□□ -2.37
YKU70	YMR284W	EDC2	P40023	145 aa	Predicted RBP	0.22	□□□□□ -2.37
YKU70	YMR284W	LYS12	P40495	371 aa	Known RBP	0.22	□□□□□ -2.37
YKU70	YMR284W	ZIM17	P42844	174 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	LST7	P53237	242 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	MDM1	Q01846	1127 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	IPK1	Q06667	281 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	MIM1	Q08176	113 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	PRR2	Q12310	699 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	ATG7	P38862	630 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	PMT4	P46971	762 aa		0.22	□□□□□ -2.37
YKU70	YMR284W	HIS3	P06633	220 aa		0.21	□□□□□ -2.38
YKU70	YMR284W	EFB1	P32471	206 aa	Known RBP	0.21	□□□□□ -2.38
YKU70	YMR284W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	0.21	□□□□□ -2.38	not detected
YKU70	YMR284W	SPH1	Q06160	661 aa		0.21	□□□□□ -2.38
YKU70	YMR284W	TSR2	Q06672	205 aa	Known RBP	0.21	□□□□□ -2.38
YKU70	YMR284W	DCI1	Q08558	271 aa		0.21	□□□□□ -2.38
YKU70	YMR284W	RRG1	Q12167	365 aa	Predicted RBP	0.21	□□□□□ -2.38
YKU70	YMR284W	ISA2	Q12425	185 aa		0.21	□□□□□ -2.38
YKU70	YMR284W	RRT12	P25381	491 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	NUP57	P48837	541 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	RET3	P53600	189 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	INM2	Q05533	292 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	YPR078C	Q06813	372 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	RTC5	Q12108	567 aa	Known RBP	0.2	□□□□□ -2.38
YKU70	YMR284W	YPL150W	Q12152	901 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	CBP2	P03874	630 aa	Predicted RBP	0.2	□□□□□ -2.38
YKU70	YMR284W	FUR1	P18562	216 aa	Known RBP	0.2	□□□□□ -2.38
YKU70	YMR284W	CSM3	Q04659	317 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	SCM3	Q12334	223 aa		0.2	□□□□□ -2.38
YKU70	YMR284W	INH1	P01097	85 aa		0.19	□□□□□ -2.38
YKU70	YMR284W	VPS1	P21576	704 aa	Known RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	DBR1	P24309	405 aa	Known RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	MPE1	P35728	441 aa	Known RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	YHL044W	P38727	235 aa		0.19	□□□□□ -2.38
YKU70	YMR284W	YJR141W	P47172	347 aa	Predicted RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	ALG9	P53868	555 aa	Known RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	SLM2	P53955	656 aa		0.19	□□□□□ -2.38
YKU70	YMR284W	OSH6	Q02201	448 aa		0.19	□□□□□ -2.38
YKU70	YMR284W	EBS1	Q03466	884 aa	Known RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	PFK27	Q12471	397 aa	Predicted RBP	0.19	□□□□□ -2.38
YKU70	YMR284W	RPS16A	P0CX51	143 aa	Known RBP	0.18	□□□□□ -2.38
YKU70	YMR284W	RPS16B	P0CX52	143 aa	Known RBP	0.18	□□□□□ -2.38
YKU70	YMR284W	MRPS5	P33759	307 aa		0.18	□□□□□ -2.38
YKU70	YMR284W	LTV1	P34078	463 aa		0.18	□□□□□ -2.38
YKU70	YMR284W	LCP5	P40079	357 aa	Predicted RBP	0.18	□□□□□ -2.38
YKU70	YMR284W	BIO4	P53630	237 aa		0.18	□□□□□ -2.38
YKU70	YMR284W	GRH1	Q04410	372 aa	Known RBP	0.18	□□□□□ -2.38
YKU70	YMR284W	AIM33	Q04516	312 aa		0.18	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 70.6 ms