RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W REC107P21651 314 aa6.78□□□□□ -1.32
NUP53YMR153W CLB4P24871 460 aa6.78□□□□□ -1.32
NUP53YMR153W SOF1P33750 489 aaKnown RBP6.78□□□□□ -1.32
NUP53YMR153W HCS1P34243 683 aa6.78□□□□□ -1.32
NUP53YMR153W SPC34P36131 295 aa6.78□□□□□ -1.32
NUP53YMR153W YBR241CP38142 488 aa6.78□□□□□ -1.32
NUP53YMR153W PEX18P38855 283 aa6.78□□□□□ -1.32
NUP53YMR153W YEL068CP39977 110 aa6.78□□□□□ -1.32
NUP53YMR153W GPI8P49018 411 aa6.78□□□□□ -1.32
NUP53YMR153W BRR6P53062 197 aa6.78□□□□□ -1.32
NUP53YMR153W MRP51Q02950 344 aa6.78□□□□□ -1.32
NUP53YMR153W SCS7Q03529 384 aa6.78□□□□□ -1.32
NUP53YMR153W GRE1Q08969 168 aa6.78□□□□□ -1.32
NUP53YMR153W NCE102Q12207 173 aaRIP-Chip data6.78□□□□□ -1.32not detected
NUP53YMR153W YOR343CQ12484 108 aa6.78□□□□□ -1.32
NUP53YMR153W RPL24AP04449 155 aaKnown RBP6.77□□□□□ -1.33
NUP53YMR153W CDC4P07834 779 aa6.77□□□□□ -1.33
NUP53YMR153W PMR1P13586 950 aa6.77□□□□□ -1.33
NUP53YMR153W TRS65P32893 560 aa6.77□□□□□ -1.33
NUP53YMR153W SRO77P38163 1010 aa6.77□□□□□ -1.33
NUP53YMR153W YHL012WP38709 493 aa6.77□□□□□ -1.33
NUP53YMR153W ARN2P38724 620 aa6.77□□□□□ -1.33
NUP53YMR153W MTC6P38849 526 aa6.77□□□□□ -1.33
NUP53YMR153W LSM4P40070 187 aaKnown RBP6.77□□□□□ -1.33
NUP53YMR153W YJR098CP47139 656 aa6.77□□□□□ -1.33
NUP53YMR153W TIM10P87108 93 aa6.77□□□□□ -1.33
NUP53YMR153W DML1Q03652 475 aa6.77□□□□□ -1.33
NUP53YMR153W YPR127WQ06494 345 aa6.77□□□□□ -1.33
NUP53YMR153W YPR147CQ06522 304 aaKnown RBP6.77□□□□□ -1.33
NUP53YMR153W YOL162WP0CF19 215 aa6.76□□□□□ -1.33
NUP53YMR153W PRE2P30656 287 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W PDB1P32473 366 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W MAL32P38158 584 aa6.76□□□□□ -1.33
NUP53YMR153W PRS3P38689 320 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W AVT7P40501 490 aa6.76□□□□□ -1.33
NUP53YMR153W YFL051CP43552 160 aa6.76□□□□□ -1.33
NUP53YMR153W MPP6P53725 186 aaPredicted RBP6.76□□□□□ -1.33
NUP53YMR153W TFB3Q03290 321 aa6.76□□□□□ -1.33
NUP53YMR153W HFD1Q04458 532 aa6.76□□□□□ -1.33
NUP53YMR153W SEC13Q04491 297 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W SNO4Q04902 237 aa6.76□□□□□ -1.33
NUP53YMR153W HSP33Q08914 237 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W NIP7Q08962 181 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W HSP32Q08992 237 aa6.76□□□□□ -1.33
NUP53YMR153W RTC5Q12108 567 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W DBP10Q12389 995 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W YOL159C-AQ3E769 90 aa6.76□□□□□ -1.33
NUP53YMR153W MCM10P32354 571 aa6.76□□□□□ -1.33
NUP53YMR153W CDC3P32457 520 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W YKL077WP36081 392 aa6.76□□□□□ -1.33
NUP53YMR153W YKL071WP36086 256 aa6.76□□□□□ -1.33
NUP53YMR153W YHL037CP38733 133 aa6.76□□□□□ -1.33
NUP53YMR153W NAB3P38996 802 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
NUP53YMR153W NAS2P40555 220 aa6.76□□□□□ -1.33
NUP53YMR153W RMR1P53060 241 aa6.76□□□□□ -1.33
NUP53YMR153W YGL235WP53071 178 aa6.76□□□□□ -1.33
NUP53YMR153W PCP1P53259 346 aa6.76□□□□□ -1.33
NUP53YMR153W HMO1Q03973 246 aaKnown RBP6.76□□□□□ -1.33
NUP53YMR153W MRPL1Q04599 285 aa6.76□□□□□ -1.33
NUP53YMR153W HRT1Q08273 121 aa6.76□□□□□ -1.33
NUP53YMR153W YDL176WQ12027 708 aa6.76□□□□□ -1.33
NUP53YMR153W APC2Q12440 853 aa6.76□□□□□ -1.33
NUP53YMR153W SET6Q12529 373 aa6.76□□□□□ -1.33
NUP53YMR153W BPH1P25356 2167 aa6.75□□□□□ -1.33
NUP53YMR153W PRB1P09232 635 aa6.75□□□□□ -1.33
NUP53YMR153W SEC12P11655 471 aa6.75□□□□□ -1.33
NUP53YMR153W PDA1P16387 420 aaKnown RBP6.75□□□□□ -1.33
NUP53YMR153W CTF8P38877 133 aa6.75□□□□□ -1.33
NUP53YMR153W POP1P41812 875 aa6.75□□□□□ -1.33
NUP53YMR153W DIM1P41819 318 aaKnown RBP6.75□□□□□ -1.33
NUP53YMR153W MOB2P43563 287 aa6.75□□□□□ -1.33
NUP53YMR153W ACS2P52910 683 aaKnown RBP6.75□□□□□ -1.33
NUP53YMR153W DAM1P53267 343 aa6.75□□□□□ -1.33
NUP53YMR153W MRPL19P53875 158 aa6.75□□□□□ -1.33
NUP53YMR153W SNT309Q06091 175 aaPredicted RBP6.75□□□□□ -1.33
NUP53YMR153W MRL1Q06815 381 aa6.75□□□□□ -1.33
NUP53YMR153W SPC3Q12133 184 aa6.75□□□□□ -1.33
NUP53YMR153W NFI1Q12216 726 aa6.75□□□□□ -1.33
NUP53YMR153W HMS1Q12398 434 aa6.75□□□□□ -1.33
NUP53YMR153W YPR015CQ12531 247 aa6.75□□□□□ -1.33
NUP53YMR153W GIT1P25346 518 aa6.74□□□□□ -1.33
NUP53YMR153W MSN4P33749 630 aa6.74□□□□□ -1.33
NUP53YMR153W NIC96P34077 839 aa6.74□□□□□ -1.33
NUP53YMR153W RPP1P38786 293 aa6.74□□□□□ -1.33
NUP53YMR153W ALP1P38971 573 aa6.74□□□□□ -1.33
NUP53YMR153W GDI1P39958 451 aaKnown RBP6.74□□□□□ -1.33
NUP53YMR153W GAT2P40209 560 aa6.74□□□□□ -1.33
NUP53YMR153W YIL165CP40446 119 aa6.74□□□□□ -1.33
NUP53YMR153W YGR016WP53209 190 aa6.74□□□□□ -1.33
NUP53YMR153W COS1P53822 381 aa6.74□□□□□ -1.33
NUP53YMR153W ACS1Q01574 713 aa6.74□□□□□ -1.33
NUP53YMR153W SSY1Q03770 852 aa6.74□□□□□ -1.33
NUP53YMR153W YDR102CQ03864 110 aa6.74□□□□□ -1.33
NUP53YMR153W RVB1Q03940 463 aaKnown RBP6.74□□□□□ -1.33
NUP53YMR153W CTS2Q06350 511 aa6.74□□□□□ -1.33
NUP53YMR153W NDL1Q06568 189 aa6.74□□□□□ -1.33
NUP53YMR153W VIK1Q12045 647 aa6.74□□□□□ -1.33
NUP53YMR153W YOR097CQ12274 175 aaPredicted RBP6.74□□□□□ -1.33
NUP53YMR153W YLR126CQ12288 251 aa6.74□□□□□ -1.33
NUP53YMR153W YDL007C-AQ2V2Q0 85 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 205 ms