RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YKR073CP36153 106 aa2.1□□□□□ -2.07
SSD1YDR293C SHM2P37291 469 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C POP8P38208 133 aa2.1□□□□□ -2.07
SSD1YDR293C SIF2P38262 535 aa2.1□□□□□ -2.07
SSD1YDR293C RTC2P38279 296 aa2.1□□□□□ -2.07
SSD1YDR293C EHT1P38295 451 aa2.1□□□□□ -2.07
SSD1YDR293C RTC3P38804 111 aaPredicted RBP2.1□□□□□ -2.07
SSD1YDR293C PSD1P39006 500 aa2.1□□□□□ -2.07
SSD1YDR293C PLB1P39105 664 aa2.1□□□□□ -2.07
SSD1YDR293C ERV46P39727 415 aa2.1□□□□□ -2.07
SSD1YDR293C AST2P39945 430 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C YMR144WP40214 342 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C LAS21P40367 830 aa2.1□□□□□ -2.07
SSD1YDR293C APQ12P40532 138 aa2.1□□□□□ -2.07
SSD1YDR293C SER2P42941 309 aa2.1□□□□□ -2.07
SSD1YDR293C YFL012WP43580 148 aa2.1□□□□□ -2.07
SSD1YDR293C MNN5P46982 586 aa2.1□□□□□ -2.07
SSD1YDR293C PHB2P50085 310 aa2.1□□□□□ -2.07
SSD1YDR293C CWC23P52868 283 aaPredicted RBP2.1□□□□□ -2.07
SSD1YDR293C ORM1P53224 222 aa2.1□□□□□ -2.07
SSD1YDR293C COQ6P53318 479 aa2.1□□□□□ -2.07
SSD1YDR293C CPR8P53728 308 aa2.1□□□□□ -2.07
SSD1YDR293C EGD1Q02642 157 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C YPL113CQ02961 396 aa2.1□□□□□ -2.07
SSD1YDR293C YMR315WQ04869 349 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C RSF1Q05043 376 aa2.1□□□□□ -2.07
SSD1YDR293C RTC5Q12108 567 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C ATP16Q12165 160 aa2.1□□□□□ -2.07
SSD1YDR293C TPO4Q12256 659 aa2.1□□□□□ -2.07
SSD1YDR293C ZWF1P11412 505 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C YSR3P23501 404 aa2.1□□□□□ -2.07
SSD1YDR293C STE50P25344 346 aa2.1□□□□□ -2.07
SSD1YDR293C STP22P25604 385 aa2.1□□□□□ -2.07
SSD1YDR293C TAH1P25638 111 aaPredicted RBP2.1□□□□□ -2.07
SSD1YDR293C SAC1P32368 623 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C PUB1P32588 453 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07 RIP-Chip
SSD1YDR293C MSN2P33748 704 aa2.1□□□□□ -2.07
SSD1YDR293C MNN2P38069 597 aa2.1□□□□□ -2.07
SSD1YDR293C ARA1P38115 344 aa2.1□□□□□ -2.07
SSD1YDR293C TRM7P38238 310 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C URA8P38627 578 aaPredicted RBP2.1□□□□□ -2.07
SSD1YDR293C YHR035WP38769 630 aa2.1□□□□□ -2.07
SSD1YDR293C PCL5P38794 229 aa2.1□□□□□ -2.07
SSD1YDR293C ALP1P38971 573 aa2.1□□□□□ -2.07
SSD1YDR293C GIP4P39732 760 aa2.1□□□□□ -2.07
SSD1YDR293C YEL073CP39974 107 aa2.1□□□□□ -2.07
SSD1YDR293C YEL020CP39994 560 aa2.1□□□□□ -2.07
SSD1YDR293C PCL6P40038 420 aa2.1□□□□□ -2.07
SSD1YDR293C MET28P40573 187 aa2.1□□□□□ -2.07
SSD1YDR293C PFS2P42841 465 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C PRY1P47032 299 aa2.1□□□□□ -2.07
SSD1YDR293C ECM27P47144 725 aa2.1□□□□□ -2.07
SSD1YDR293C COS12P53053 380 aa2.1□□□□□ -2.07
SSD1YDR293C MPC1P53157 130 aaKnown RBP2.1□□□□□ -2.07
SSD1YDR293C PRM8P53174 237 aa2.1□□□□□ -2.07
SSD1YDR293C MKC7P53379 596 aa2.1□□□□□ -2.07
SSD1YDR293C YKR011CQ02209 353 aa2.1□□□□□ -2.07
SSD1YDR293C PIR1Q03178 341 aa2.1□□□□□ -2.07
SSD1YDR293C TAF12Q03761 539 aa2.1□□□□□ -2.07
SSD1YDR293C SMA2Q04658 369 aa2.1□□□□□ -2.07
SSD1YDR293C YPR091CQ06833 770 aa2.1□□□□□ -2.07
SSD1YDR293C PRP11Q07350 266 aaPredicted RBP2.1□□□□□ -2.07
SSD1YDR293C RSC58Q07979 502 aa2.1□□□□□ -2.07
SSD1YDR293C YOR365CQ08844 703 aa2.1□□□□□ -2.07
SSD1YDR293C NDD1Q08887 554 aa2.1□□□□□ -2.07
SSD1YDR293C YPQ1Q12010 308 aa2.1□□□□□ -2.07
SSD1YDR293C RTK1Q12100 620 aaPredicted RBP2.1□□□□□ -2.07
SSD1YDR293C SIA1Q12212 622 aa2.1□□□□□ -2.07
SSD1YDR293C RHO1P06780 209 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C MER1P16523 270 aa2.09□□□□□ -2.07
SSD1YDR293C SEN2P16658 377 aa2.09□□□□□ -2.07
SSD1YDR293C MGR1P25573 417 aa2.09□□□□□ -2.07
SSD1YDR293C NTH1P32356 751 aa2.09□□□□□ -2.07
SSD1YDR293C TRS65P32893 560 aa2.09□□□□□ -2.07
SSD1YDR293C VPS51P36116 164 aa2.09□□□□□ -2.07
SSD1YDR293C BNA4P38169 460 aa2.09□□□□□ -2.07
SSD1YDR293C MSS4P38994 779 aa2.09□□□□□ -2.07
SSD1YDR293C PHM8P40025 321 aa2.09□□□□□ -2.07
SSD1YDR293C STB4P50104 949 aa2.09□□□□□ -2.07
SSD1YDR293C UBC12P52491 188 aa2.09□□□□□ -2.07
SSD1YDR293C YGL235WP53071 178 aa2.09□□□□□ -2.07
SSD1YDR293C DUO1P53168 247 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C TDA7P53882 636 aaPredicted RBP2.09□□□□□ -2.07
SSD1YDR293C YPR127WQ06494 345 aa2.09□□□□□ -2.07
SSD1YDR293C RAD34Q06665 692 aa2.09□□□□□ -2.07
SSD1YDR293C YOR289WQ12012 251 aaPredicted RBP2.09□□□□□ -2.07
SSD1YDR293C YGK3Q12222 375 aaPredicted RBP2.09□□□□□ -2.07
SSD1YDR293C TRM13Q12383 476 aa2.09□□□□□ -2.07
SSD1YDR293C RRI1Q12468 440 aa2.09□□□□□ -2.07
SSD1YDR293C SET6Q12529 373 aa2.09□□□□□ -2.07
SSD1YDR293C YBR182C-AQ8TGU6 64 aa2.09□□□□□ -2.07
SSD1YDR293C YBR126W-AQ8TGU7 68 aa2.09□□□□□ -2.07
SSD1YDR293C MTR10Q99189 972 aa2.09□□□□□ -2.07
SSD1YDR293C PNO1Q99216 274 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C CAR2P07991 424 aaKnown RBP2.09□□□□□ -2.07
SSD1YDR293C IFM1P25038 676 aa2.09□□□□□ -2.07
SSD1YDR293C RBK1P25332 333 aa2.09□□□□□ -2.07
SSD1YDR293C UBC8P28263 218 aa2.09□□□□□ -2.07
SSD1YDR293C IDH1P28834 360 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
SSD1YDR293C MRPL36P36531 177 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms