RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A ATG13Q06628 738 aa10.74□□□□□ -0.69
TGA1tA(UGC)A UTP10P42945 1769 aaKnown RBP10.73□□□□□ -0.69
TGA1tA(UGC)A RAD4P14736 754 aa10.73□□□□□ -0.69
TGA1tA(UGC)A CTF4Q01454 927 aa10.72□□□□□ -0.69
TGA1tA(UGC)A GRX1P25373 110 aaKnown RBP10.71□□□□□ -0.69
TGA1tA(UGC)A AKL1P38080 1108 aaKnown RBP10.7□□□□□ -0.7
TGA1tA(UGC)A RPG1P38249 964 aaKnown RBP10.7□□□□□ -0.7
TGA1tA(UGC)A RRP46P53256 223 aaPredicted RBP10.7□□□□□ -0.7
TGA1tA(UGC)A GRE2Q12068 342 aaKnown RBP10.7□□□□□ -0.7
TGA1tA(UGC)A TOS1P38288 455 aa10.69□□□□□ -0.7
TGA1tA(UGC)A HSP104P31539 908 aaKnown RBP10.68□□□□□ -0.7
TGA1tA(UGC)A SSA1P10591 642 aaKnown RBP10.67□□□□□ -0.7
TGA1tA(UGC)A UTP22P53254 1237 aaPredicted RBP10.67□□□□□ -0.7
TGA1tA(UGC)A ALD3P54114 506 aa10.67□□□□□ -0.7
TGA1tA(UGC)A TUM1Q08686 304 aaKnown RBP10.67□□□□□ -0.7
TGA1tA(UGC)A BUG1Q12191 341 aa10.67□□□□□ -0.7
TGA1tA(UGC)A PSD2P53037 1138 aaKnown RBP10.65□□□□□ -0.7
TGA1tA(UGC)A YBP2P53169 641 aa10.65□□□□□ -0.7
TGA1tA(UGC)A NTH2P35172 780 aa10.63□□□□□ -0.71
TGA1tA(UGC)A PAP2P53632 584 aaKnown RBP10.63□□□□□ -0.71
TGA1tA(UGC)A IOC4Q04213 475 aa10.63□□□□□ -0.71
TGA1tA(UGC)A AOS1Q06624 347 aa10.62□□□□□ -0.71
TGA1tA(UGC)A NYV1Q12255 253 aa10.59□□□□□ -0.71
TGA1tA(UGC)A KCC4P25389 1037 aa10.58□□□□□ -0.72
TGA1tA(UGC)A RMT2Q03305 412 aa10.58□□□□□ -0.72
TGA1tA(UGC)A RIX7Q07844 837 aaKnown RBP10.58□□□□□ -0.72
TGA1tA(UGC)A EAF6P47128 113 aa10.57□□□□□ -0.72
TGA1tA(UGC)A LYS2P07702 1392 aa10.56□□□□□ -0.72
TGA1tA(UGC)A ALE1Q08548 619 aa10.56□□□□□ -0.72
TGA1tA(UGC)A ERT1P38140 529 aa10.54□□□□□ -0.72
TGA1tA(UGC)A YNL050CP53952 270 aa10.54□□□□□ -0.72
TGA1tA(UGC)A NOP53Q12080 455 aaKnown RBP10.54□□□□□ -0.72
TGA1tA(UGC)A PRD1P25375 712 aa10.53□□□□□ -0.72
TGA1tA(UGC)A UGA3P26370 528 aa10.53□□□□□ -0.72
TGA1tA(UGC)A TEA1P47988 759 aa10.53□□□□□ -0.72
TGA1tA(UGC)A PHM7Q12252 991 aa10.53□□□□□ -0.72
TGA1tA(UGC)A SAP155P43612 1002 aa10.52□□□□□ -0.73
TGA1tA(UGC)A MDG1P53885 366 aa10.52□□□□□ -0.73
TGA1tA(UGC)A HPC2Q01448 625 aa10.51□□□□□ -0.73
TGA1tA(UGC)A KIN4Q01919 800 aa10.51□□□□□ -0.73
TGA1tA(UGC)A RTR1P40084 226 aaPredicted RBP10.5□□□□□ -0.73
TGA1tA(UGC)A MSN5P52918 1224 aa10.5□□□□□ -0.73
TGA1tA(UGC)A PMD1P32634 1753 aa10.49□□□□□ -0.73
TGA1tA(UGC)A ARG8P18544 423 aa10.49□□□□□ -0.73
TGA1tA(UGC)A BUD27P43573 796 aaKnown RBP RIP-Chip data10.49□□□□□ -0.73not detected
TGA1tA(UGC)A THI22Q06490 572 aa10.49□□□□□ -0.73
TGA1tA(UGC)A CTT1P06115 562 aa10.48□□□□□ -0.73
TGA1tA(UGC)A YKL222CP35995 705 aa10.47□□□□□ -0.73
TGA1tA(UGC)A SSP2Q08646 371 aa10.47□□□□□ -0.73
TGA1tA(UGC)A DCD1P06773 312 aa10.46□□□□□ -0.73
TGA1tA(UGC)A NSE3Q05541 303 aa10.46□□□□□ -0.73
TGA1tA(UGC)A TOM1Q03280 3268 aa10.45□□□□□ -0.74
TGA1tA(UGC)A YFR016CP43597 1233 aaKnown RBP10.45□□□□□ -0.74
TGA1tA(UGC)A YPR204WQ08995 1032 aa10.45□□□□□ -0.74
TGA1tA(UGC)A PFF1P38244 976 aa10.44□□□□□ -0.74
TGA1tA(UGC)A MAM1P40065 302 aa10.44□□□□□ -0.74
TGA1tA(UGC)A YER156CP40093 338 aaKnown RBP10.44□□□□□ -0.74
TGA1tA(UGC)A HEF3P53978 1044 aaKnown RBP10.44□□□□□ -0.74
TGA1tA(UGC)A RTT109Q07794 436 aa10.44□□□□□ -0.74
TGA1tA(UGC)A CTI6Q08923 506 aa10.44□□□□□ -0.74
TGA1tA(UGC)A LPD1P09624 499 aaKnown RBP10.43□□□□□ -0.74
TGA1tA(UGC)A RAT1Q02792 1006 aaKnown RBP10.43□□□□□ -0.74
TGA1tA(UGC)A COQ4O13525 335 aa10.42□□□□□ -0.74
TGA1tA(UGC)A SMY1P32364 656 aaKnown RBP10.42□□□□□ -0.74
TGA1tA(UGC)A SER1P33330 395 aaKnown RBP10.42□□□□□ -0.74
TGA1tA(UGC)A RRT14P40470 206 aa10.42□□□□□ -0.74
TGA1tA(UGC)A MPP10P47083 593 aaKnown RBP10.42□□□□□ -0.74
TGA1tA(UGC)A ZDS1P50111 915 aaKnown RBP10.42□□□□□ -0.74
TGA1tA(UGC)A CWH41P53008 833 aa10.42□□□□□ -0.74
TGA1tA(UGC)A YGL082WP53155 381 aa10.42□□□□□ -0.74
TGA1tA(UGC)A SSK22P25390 1331 aaPredicted RBP10.4□□□□□ -0.74
TGA1tA(UGC)A BMS1Q08965 1183 aaKnown RBP10.4□□□□□ -0.74
TGA1tA(UGC)A APL2P36000 726 aaPredicted RBP10.39□□□□□ -0.75
TGA1tA(UGC)A ZDS2P54786 942 aa10.38□□□□□ -0.75
TGA1tA(UGC)A ERO1Q03103 563 aa10.38□□□□□ -0.75
TGA1tA(UGC)A YDL144CQ07589 356 aa10.38□□□□□ -0.75
TGA1tA(UGC)A HKR1P41809 1802 aa10.37□□□□□ -0.75
TGA1tA(UGC)A GYP7P48365 746 aa10.37□□□□□ -0.75
TGA1tA(UGC)A DIB1Q06819 143 aaPredicted RBP10.37□□□□□ -0.75
TGA1tA(UGC)A BDF2Q07442 638 aa10.37□□□□□ -0.75
TGA1tA(UGC)A YOL057WQ08225 711 aa10.37□□□□□ -0.75
TGA1tA(UGC)A UBP16Q02863 499 aa10.36□□□□□ -0.75
TGA1tA(UGC)A YLR271WQ06152 274 aa10.35□□□□□ -0.75
TGA1tA(UGC)A YDR306CQ06640 478 aa10.35□□□□□ -0.75
TGA1tA(UGC)A FIG2P25653 1609 aa10.35□□□□□ -0.75
TGA1tA(UGC)A SWI1P09547 1314 aa10.34□□□□□ -0.75
TGA1tA(UGC)A SIT4P20604 311 aa10.34□□□□□ -0.75
TGA1tA(UGC)A YJR008WP47085 338 aa10.34□□□□□ -0.75
TGA1tA(UGC)A SQS1P53866 767 aaKnown RBP10.33□□□□□ -0.76
TGA1tA(UGC)A TPD3P31383 635 aa10.32□□□□□ -0.76
TGA1tA(UGC)A FPK1P53739 893 aa10.32□□□□□ -0.76
TGA1tA(UGC)A SRT1Q03175 343 aa10.32□□□□□ -0.76
TGA1tA(UGC)A HAT1Q12341 374 aa10.32□□□□□ -0.76
TGA1tA(UGC)A CAF20P12962 161 aaKnown RBP10.31□□□□□ -0.76
TGA1tA(UGC)A YBR287WP38355 427 aa10.31□□□□□ -0.76
TGA1tA(UGC)A VPS64Q03944 604 aa10.31□□□□□ -0.76
TGA1tA(UGC)A IRC3Q06683 689 aa10.31□□□□□ -0.76
TGA1tA(UGC)A FAS2P19097 1887 aaKnown RBP10.31□□□□□ -0.76
TGA1tA(UGC)A DNM1P54861 757 aa10.3□□□□□ -0.76
TGA1tA(UGC)A RPP0P05317 312 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms