RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C YJL181WP46987 611 aa4.08□□□□□ -1.76
RPA135YPR010C ATG13Q06628 738 aa4.08□□□□□ -1.76
RPA135YPR010C TCB1Q12466 1186 aa4.08□□□□□ -1.76
RPA135YPR010C TRP5P00931 707 aaKnown RBP4.08□□□□□ -1.76
RPA135YPR010C SPT21P35209 758 aa4.08□□□□□ -1.76
RPA135YPR010C SLX8P40072 274 aa4.08□□□□□ -1.76
RPA135YPR010C ZDS2P54786 942 aa4.08□□□□□ -1.76
RPA135YPR010C DNF2Q12675 1612 aa4.08□□□□□ -1.76
RPA135YPR010C BNI1P41832 1953 aa4.07□□□□□ -1.76
RPA135YPR010C DJP1P40564 432 aa4.07□□□□□ -1.76
RPA135YPR010C POL32P47110 350 aa4.07□□□□□ -1.76
RPA135YPR010C DSD1P53095 428 aa4.07□□□□□ -1.76
RPA135YPR010C AOS1Q06624 347 aa4.07□□□□□ -1.76
RPA135YPR010C SLA1P32790 1244 aa4.07□□□□□ -1.76
RPA135YPR010C GYP7P48365 746 aa4.07□□□□□ -1.76
RPA135YPR010C TAP42Q04372 366 aa4.07□□□□□ -1.76
RPA135YPR010C BUD27P43573 796 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
RPA135YPR010C CWC22P53333 577 aaKnown RBP4.07□□□□□ -1.76
RPA135YPR010C FRK1Q03002 865 aaPredicted RBP4.07□□□□□ -1.76
RPA135YPR010C SPC42P36094 363 aa4.06□□□□□ -1.76
RPA135YPR010C ENT3P47160 408 aa4.06□□□□□ -1.76
RPA135YPR010C YLR271WQ06152 274 aa4.06□□□□□ -1.76
RPA135YPR010C NUP188P52593 1655 aaKnown RBP4.06□□□□□ -1.76
RPA135YPR010C RAD4P14736 754 aa4.06□□□□□ -1.76
RPA135YPR010C SER1P33330 395 aaKnown RBP4.06□□□□□ -1.76
RPA135YPR010C YKL133CP36066 463 aa4.06□□□□□ -1.76
RPA135YPR010C YBP2P53169 641 aa4.06□□□□□ -1.76
RPA135YPR010C BCK1Q01389 1478 aa4.06□□□□□ -1.76
RPA135YPR010C CHC1P22137 1653 aaKnown RBP4.06□□□□□ -1.76
RPA135YPR010C RCR1P38212 213 aa4.05□□□□□ -1.76
RPA135YPR010C YIL092WP40497 633 aa4.05□□□□□ -1.76
RPA135YPR010C YGL082WP53155 381 aa4.05□□□□□ -1.76
RPA135YPR010C CSI1Q04368 295 aa4.05□□□□□ -1.76
RPA135YPR010C NSE3Q05541 303 aa4.05□□□□□ -1.76
RPA135YPR010C RPP0P05317 312 aaKnown RBP4.04□□□□□ -1.76
RPA135YPR010C REB1P21538 810 aa4.04□□□□□ -1.76
RPA135YPR010C NUG1P40010 520 aaKnown RBP4.04□□□□□ -1.76
RPA135YPR010C SRT1Q03175 343 aa4.04□□□□□ -1.76
RPA135YPR010C SLM3Q12093 417 aa4.04□□□□□ -1.76
RPA135YPR010C SIS2P36024 562 aa4.04□□□□□ -1.76
RPA135YPR010C BRL1P38770 471 aa4.04□□□□□ -1.76
RPA135YPR010C COQ4O13525 335 aa4.03□□□□□ -1.76
RPA135YPR010C VAS1P07806 1104 aaKnown RBP4.03□□□□□ -1.76
RPA135YPR010C NTH2P35172 780 aa4.03□□□□□ -1.76
RPA135YPR010C SUB2Q07478 446 aaKnown RBP4.03□□□□□ -1.76
RPA135YPR010C ENV9Q08651 330 aa4.03□□□□□ -1.76
RPA135YPR010C PSK1P31374 1356 aa4.03□□□□□ -1.76
RPA135YPR010C MEC3Q02574 474 aa4.03□□□□□ -1.76
RPA135YPR010C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
RPA135YPR010C APL2P36000 726 aaPredicted RBP4.02□□□□□ -1.77
RPA135YPR010C ILV3P39522 585 aaKnown RBP4.02□□□□□ -1.77
RPA135YPR010C CTI6Q08923 506 aa4.02□□□□□ -1.77
RPA135YPR010C GIN4Q12263 1142 aa4.02□□□□□ -1.77
RPA135YPR010C RAD24P32641 659 aa4.02□□□□□ -1.77
RPA135YPR010C OCA5P38738 679 aa4.02□□□□□ -1.77
RPA135YPR010C IES2P40154 320 aa4.02□□□□□ -1.77
RPA135YPR010C PRY3P47033 881 aa4.02□□□□□ -1.77
RPA135YPR010C HEF3P53978 1044 aaKnown RBP4.02□□□□□ -1.77
RPA135YPR010C ISW2Q08773 1120 aa4.02□□□□□ -1.77
RPA135YPR010C MRP7P12687 371 aa4.01□□□□□ -1.77
RPA135YPR010C KCC4P25389 1037 aa4.01□□□□□ -1.77
RPA135YPR010C YPR148CQ06523 435 aa4.01□□□□□ -1.77
RPA135YPR010C NCB2Q92317 146 aa4.01□□□□□ -1.77
RPA135YPR010C AUS1Q08409 1394 aa4.01□□□□□ -1.77
RPA135YPR010C KIN1P13185 1064 aa4.01□□□□□ -1.77
RPA135YPR010C ARP5P53946 755 aa4.01□□□□□ -1.77
RPA135YPR010C NKP2Q06162 153 aa4.01□□□□□ -1.77
RPA135YPR010C YRF1-4O13559 1382 aa4.01□□□□□ -1.77
RPA135YPR010C MNN4P36044 1178 aa4.01□□□□□ -1.77
RPA135YPR010C ISW1P38144 1129 aa4.01□□□□□ -1.77
RPA135YPR010C YNL050CP53952 270 aa4.01□□□□□ -1.77
RPA135YPR010C DOS2P54858 310 aa4.01□□□□□ -1.77
RPA135YPR010C NUP192P47054 1683 aa4.01□□□□□ -1.77
RPA135YPR010C PBY1P38254 753 aa4□□□□□ -1.77
RPA135YPR010C GUA1P38625 525 aaKnown RBP4□□□□□ -1.77
RPA135YPR010C SSF1P38789 453 aaPredicted RBP4□□□□□ -1.77
RPA135YPR010C ADE16P54113 591 aaKnown RBP4□□□□□ -1.77
RPA135YPR010C FCP1Q03254 732 aa4□□□□□ -1.77
RPA135YPR010C VMS1Q04311 632 aaKnown RBP4□□□□□ -1.77
RPA135YPR010C CST9Q06032 482 aa4□□□□□ -1.77
RPA135YPR010C RPO41P13433 1351 aaKnown RBP4□□□□□ -1.77
RPA135YPR010C GEF1P37020 779 aa4□□□□□ -1.77
RPA135YPR010C SEN54Q02825 467 aaPredicted RBP4□□□□□ -1.77
RPA135YPR010C FPR4Q06205 392 aaPredicted RBP4□□□□□ -1.77
RPA135YPR010C IMH1Q06704 911 aaKnown RBP4□□□□□ -1.77
RPA135YPR010C COBP00163 385 aa4□□□□□ -1.77
RPA135YPR010C OSM1P21375 501 aaKnown RBP4□□□□□ -1.77
RPA135YPR010C MAM1P40065 302 aa4□□□□□ -1.77
RPA135YPR010C RMT2Q03305 412 aa4□□□□□ -1.77
RPA135YPR010C RRI2Q12348 645 aa4□□□□□ -1.77
RPA135YPR010C ESF1Q06344 628 aaKnown RBP3.99□□□□□ -1.77
RPA135YPR010C RPN11P43588 306 aaKnown RBP3.99□□□□□ -1.77
RPA135YPR010C PDR18P53756 1333 aa3.99□□□□□ -1.77
RPA135YPR010C UGA3P26370 528 aa3.98□□□□□ -1.77
RPA135YPR010C YJR008WP47085 338 aa3.98□□□□□ -1.77
RPA135YPR010C TEA1P47988 759 aa3.98□□□□□ -1.77
RPA135YPR010C HPC2Q01448 625 aa3.98□□□□□ -1.77
RPA135YPR010C PRP40P33203 583 aaKnown RBP3.98□□□□□ -1.77
RPA135YPR010C BRN1P38170 754 aa3.98□□□□□ -1.77
RPA135YPR010C TUM1Q08686 304 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms