RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	APP1	P53933	587 aa		5.63	□□□□□ -1.51
HAA1	YPR008W	TEC1	P18412	486 aa		5.62	□□□□□ -1.51
HAA1	YPR008W	CSE4	P36012	229 aa		5.61	□□□□□ -1.51
HAA1	YPR008W	HST3	P53687	447 aa		5.6	□□□□□ -1.51
HAA1	YPR008W	ISF1	P32488	338 aa		5.6	□□□□□ -1.51
HAA1	YPR008W	YJR115W	P47152	169 aa		5.6	□□□□□ -1.51
HAA1	YPR008W	EMW1	P42842	904 aa	Known RBP	5.59	□□□□□ -1.51
HAA1	YPR008W	NAF1	P53919	492 aa	Known RBP	5.59	□□□□□ -1.51
HAA1	YPR008W	DMA2	P53924	522 aa		5.59	□□□□□ -1.51
HAA1	YPR008W	YJL007C	P47080	104 aa		5.58	□□□□□ -1.52
HAA1	YPR008W	MSB3	P48566	633 aa	Predicted RBP	5.58	□□□□□ -1.52
HAA1	YPR008W	YBL086C	P38177	466 aa		5.57	□□□□□ -1.52
HAA1	YPR008W	YNL108C	P53929	270 aa		5.57	□□□□□ -1.52
HAA1	YPR008W	SUP45	P12385	437 aa	Known RBP	5.57	□□□□□ -1.52
HAA1	YPR008W	FRA1	Q07825	749 aa		5.57	□□□□□ -1.52
HAA1	YPR008W	MCM16	Q12262	181 aa		5.57	□□□□□ -1.52
HAA1	YPR008W	ATG32	P40458	529 aa		5.56	□□□□□ -1.52
HAA1	YPR008W	EMP47	P43555	445 aa		5.56	□□□□□ -1.52
HAA1	YPR008W	ENO2	P00925	437 aa	Known RBP	5.55	□□□□□ -1.52
HAA1	YPR008W	GUT2	P32191	649 aa		5.55	□□□□□ -1.52
HAA1	YPR008W	BIM1	P40013	344 aa		5.55	□□□□□ -1.52
HAA1	YPR008W	GCR2	Q01722	534 aa		5.55	□□□□□ -1.52
HAA1	YPR008W	UGA3	P26370	528 aa		5.55	□□□□□ -1.52
HAA1	YPR008W	MET22	P32179	357 aa		5.55	□□□□□ -1.52
HAA1	YPR008W	SPT5	P27692	1063 aa	Known RBP	5.54	□□□□□ -1.52
HAA1	YPR008W	APL6	P46682	809 aa		5.54	□□□□□ -1.52
HAA1	YPR008W	PTK2	P47116	818 aa	Known RBP	5.54	□□□□□ -1.52
HAA1	YPR008W	STE20	Q03497	939 aa	Known RBP	5.54	□□□□□ -1.52
HAA1	YPR008W	MKS1	P34072	584 aa		5.51	□□□□□ -1.53
HAA1	YPR008W	DFG5	Q05031	458 aa		5.51	□□□□□ -1.53
HAA1	YPR008W	TIF1	P10081	395 aa	Known RBP	5.51	□□□□□ -1.53
HAA1	YPR008W	RDS2	P19541	446 aa	Known RBP	5.51	□□□□□ -1.53
HAA1	YPR008W	RIM21	P48565	533 aa		5.51	□□□□□ -1.53
HAA1	YPR008W	HAL5	P38970	855 aa	Known RBP	5.5	□□□□□ -1.53
HAA1	YPR008W	ATG20	Q07528	640 aa		5.5	□□□□□ -1.53
HAA1	YPR008W	ENV9	Q08651	330 aa		5.5	□□□□□ -1.53
HAA1	YPR008W	FBP26	P32604	452 aa		5.49	□□□□□ -1.53
HAA1	YPR008W	AAD14	P42884	376 aa		5.49	□□□□□ -1.53
HAA1	YPR008W	YDR444W	Q04093	687 aa		5.49	□□□□□ -1.53
HAA1	YPR008W	GAR1	P28007	205 aa	Known RBP	5.48	□□□□□ -1.53
HAA1	YPR008W	ISR1	Q06098	443 aa	Known RBP	5.48	□□□□□ -1.53
HAA1	YPR008W	STE6	P12866	1290 aa		5.47	□□□□□ -1.53
HAA1	YPR008W	ISU1	Q03020	165 aa		5.47	□□□□□ -1.53
HAA1	YPR008W	MRX10	Q05648	414 aa		5.47	□□□□□ -1.53
HAA1	YPR008W	LCB5	Q06147	687 aa	Known RBP	5.47	□□□□□ -1.53
HAA1	YPR008W	ENO1	P00924	437 aa	Known RBP	5.47	□□□□□ -1.53
HAA1	YPR008W	DLD1	P32891	587 aa		5.47	□□□□□ -1.53
HAA1	YPR008W	OPT2	Q06593	877 aa		5.47	□□□□□ -1.53
HAA1	YPR008W	SRF1	Q12516	437 aa		5.47	□□□□□ -1.53
HAA1	YPR008W	RTG2	P32608	588 aa	Known RBP	5.46	□□□□□ -1.54
HAA1	YPR008W	SOH1	P38633	127 aa		5.46	□□□□□ -1.54
HAA1	YPR008W	NUP85	P46673	744 aa		5.46	□□□□□ -1.54
HAA1	YPR008W	RTT106	P40161	455 aa		5.45	□□□□□ -1.54
HAA1	YPR008W	MRX12	P47084	519 aa		5.45	□□□□□ -1.54
HAA1	YPR008W	BDS1	Q08347	646 aa		5.45	□□□□□ -1.54
HAA1	YPR008W	ARG82	P07250	355 aa		5.44	□□□□□ -1.54
HAA1	YPR008W	HGH1	P48362	394 aa	Known RBP	5.44	□□□□□ -1.54
HAA1	YPR008W	YDL176W	Q12027	708 aa		5.44	□□□□□ -1.54
HAA1	YPR008W	YPP1	P46951	817 aa		5.43	□□□□□ -1.54
HAA1	YPR008W	YJR098C	P47139	656 aa		5.43	□□□□□ -1.54
HAA1	YPR008W	YPR204W	Q08995	1032 aa		5.43	□□□□□ -1.54
HAA1	YPR008W	RPL34B	P40525	121 aa	Known RBP	5.41	□□□□□ -1.54
HAA1	YPR008W	HDA3	Q06623	655 aa		5.41	□□□□□ -1.54
HAA1	YPR008W	PEP12	P32854	288 aa		5.4	□□□□□ -1.54
HAA1	YPR008W	LSC2	P53312	427 aa		5.4	□□□□□ -1.54
HAA1	YPR008W	UTP13	Q05946	817 aa	Known RBP	5.4	□□□□□ -1.54
HAA1	YPR008W	WTM2	Q12206	467 aa		5.4	□□□□□ -1.54
HAA1	YPR008W	TCB1	Q12466	1186 aa		5.4	□□□□□ -1.54
HAA1	YPR008W	SPT2	P06843	333 aa	Predicted RBP	5.39	□□□□□ -1.55
HAA1	YPR008W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
HAA1	YPR008W	TY1A-BL	Q12266	440 aa		5.39	□□□□□ -1.55
HAA1	YPR008W	GLY1	P37303	387 aa	Known RBP	5.39	□□□□□ -1.55
HAA1	YPR008W	MIP1	P15801	1254 aa		5.38	□□□□□ -1.55
HAA1	YPR008W	UTR2	P32623	467 aa		5.38	□□□□□ -1.55
HAA1	YPR008W	CAF120	P53836	1060 aa		5.38	□□□□□ -1.55
HAA1	YPR008W	YPL062W	Q02781	134 aa		5.38	□□□□□ -1.55
HAA1	YPR008W	RGA1	P39083	1007 aa		5.37	□□□□□ -1.55
HAA1	YPR008W	ACO2	P39533	789 aa		5.37	□□□□□ -1.55
HAA1	YPR008W	SLX8	P40072	274 aa		5.37	□□□□□ -1.55
HAA1	YPR008W	DAT1	P13483	248 aa	Known RBP	5.36	□□□□□ -1.55
HAA1	YPR008W	YLR346C	Q06139	101 aa		5.36	□□□□□ -1.55
HAA1	YPR008W	UTP7	P40055	554 aa	Known RBP	5.36	□□□□□ -1.55
HAA1	YPR008W	ATG3	P40344	310 aa		5.36	□□□□□ -1.55
HAA1	YPR008W	SCW11	P53189	542 aa		5.36	□□□□□ -1.55
HAA1	YPR008W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
HAA1	YPR008W	SSN3	P39073	555 aa		5.35	□□□□□ -1.55
HAA1	YPR008W	KTR7	P40504	517 aa		5.35	□□□□□ -1.55
HAA1	YPR008W	YIR007W	P40566	764 aa		5.35	□□□□□ -1.55
HAA1	YPR008W	UBP2	Q01476	1272 aa		5.35	□□□□□ -1.55
HAA1	YPR008W	TY1A-DR3	Q12441	440 aa		5.35	□□□□□ -1.55
HAA1	YPR008W	TTI1	P36097	1038 aa		5.34	□□□□□ -1.55
HAA1	YPR008W	OSH7	P38755	437 aa		5.34	□□□□□ -1.55
HAA1	YPR008W	DLD3	P39976	496 aa	Known RBP	5.33	□□□□□ -1.56
HAA1	YPR008W	NAM8	Q00539	523 aa	Known RBP	5.33	□□□□□ -1.56
HAA1	YPR008W	CDC19	P00549	500 aa	Known RBP	5.33	□□□□□ -1.56
HAA1	YPR008W	SWI5	P08153	709 aa		5.33	□□□□□ -1.56
HAA1	YPR008W	PDI1	P17967	522 aa	Known RBP	5.33	□□□□□ -1.56
HAA1	YPR008W	SLA1	P32790	1244 aa		5.33	□□□□□ -1.56
HAA1	YPR008W	AIM9	P40053	627 aa	Known RBP	5.33	□□□□□ -1.56
HAA1	YPR008W	DAL1	P32375	460 aa		5.32	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms