RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C MET32Q12041 191 aa3.46□□□□□ -1.86
NIP100YPL174C MKS1P34072 584 aa3.45□□□□□ -1.86
NIP100YPL174C AFT1P22149 690 aa3.45□□□□□ -1.86
NIP100YPL174C ITT1Q04638 464 aa3.44□□□□□ -1.86
NIP100YPL174C MAK16P10962 306 aaPredicted RBP3.44□□□□□ -1.86
NIP100YPL174C FIG4P42837 879 aa3.44□□□□□ -1.86
NIP100YPL174C STE20Q03497 939 aaKnown RBP3.44□□□□□ -1.86
NIP100YPL174C YLR346CQ06139 101 aa3.44□□□□□ -1.86
NIP100YPL174C VAC17P25591 423 aa3.43□□□□□ -1.86
NIP100YPL174C CSE4P36012 229 aa3.43□□□□□ -1.86
NIP100YPL174C YJR115WP47152 169 aa3.43□□□□□ -1.86
NIP100YPL174C RPP2BP02400 110 aaKnown RBP3.43□□□□□ -1.86
NIP100YPL174C ARG82P07250 355 aa3.43□□□□□ -1.86
NIP100YPL174C RSC30P38781 883 aa3.43□□□□□ -1.86
NIP100YPL174C PKC1P24583 1151 aa3.42□□□□□ -1.86
NIP100YPL174C SPT5P27692 1063 aaKnown RBP3.42□□□□□ -1.86
NIP100YPL174C YNL108CP53929 270 aa3.42□□□□□ -1.86
NIP100YPL174C ATG3P40344 310 aa3.42□□□□□ -1.86
NIP100YPL174C DFG5Q05031 458 aa3.42□□□□□ -1.86
NIP100YPL174C ENV9Q08651 330 aa3.42□□□□□ -1.86
NIP100YPL174C YPP1P46951 817 aa3.41□□□□□ -1.86
NIP100YPL174C BDS1Q08347 646 aa3.41□□□□□ -1.86
NIP100YPL174C DAT1P13483 248 aaKnown RBP3.41□□□□□ -1.86
NIP100YPL174C ISF1P32488 338 aa3.41□□□□□ -1.86
NIP100YPL174C DLD3P39976 496 aaKnown RBP3.41□□□□□ -1.86
NIP100YPL174C PTK2P47116 818 aaKnown RBP3.41□□□□□ -1.86
NIP100YPL174C MSB3P48566 633 aaPredicted RBP3.4□□□□□ -1.86
NIP100YPL174C NAF1P53919 492 aaKnown RBP3.4□□□□□ -1.86
NIP100YPL174C YDR444WQ04093 687 aa3.4□□□□□ -1.86
NIP100YPL174C EMP47P43555 445 aa3.4□□□□□ -1.87
NIP100YPL174C TBS1P38114 1094 aa3.4□□□□□ -1.87
NIP100YPL174C ATG20Q07528 640 aa3.4□□□□□ -1.87
NIP100YPL174C LSC2P53312 427 aa3.39□□□□□ -1.87
NIP100YPL174C MCM16Q12262 181 aa3.39□□□□□ -1.87
NIP100YPL174C YDJ1P25491 409 aaKnown RBP3.39□□□□□ -1.87
NIP100YPL174C RTT106P40161 455 aa3.39□□□□□ -1.87
NIP100YPL174C DMA2P53924 522 aa3.39□□□□□ -1.87
NIP100YPL174C MET22P32179 357 aa3.38□□□□□ -1.87
NIP100YPL174C BIO2P32451 375 aa3.38□□□□□ -1.87
NIP100YPL174C YPR204WQ08995 1032 aa3.38□□□□□ -1.87
NIP100YPL174C DLD1P32891 587 aa3.38□□□□□ -1.87
NIP100YPL174C MRT4P33201 236 aaKnown RBP3.38□□□□□ -1.87
NIP100YPL174C MIP1P15801 1254 aa3.37□□□□□ -1.87
NIP100YPL174C BIM1P40013 344 aa3.37□□□□□ -1.87
NIP100YPL174C EMW1P42842 904 aaKnown RBP3.37□□□□□ -1.87
NIP100YPL174C MRX12P47084 519 aa3.37□□□□□ -1.87
NIP100YPL174C ISR1Q06098 443 aaKnown RBP3.37□□□□□ -1.87
NIP100YPL174C RTG2P32608 588 aaKnown RBP3.37□□□□□ -1.87
NIP100YPL174C SOH1P38633 127 aa3.37□□□□□ -1.87
NIP100YPL174C AAD14P42884 376 aa3.37□□□□□ -1.87
NIP100YPL174C NUP85P46673 744 aa3.37□□□□□ -1.87
NIP100YPL174C UTR2P32623 467 aa3.36□□□□□ -1.87
NIP100YPL174C SCW11P53189 542 aa3.36□□□□□ -1.87
NIP100YPL174C FBP26P32604 452 aa3.36□□□□□ -1.87
NIP100YPL174C YBL086CP38177 466 aa3.36□□□□□ -1.87
NIP100YPL174C KTR7P40504 517 aa3.36□□□□□ -1.87
NIP100YPL174C ALA1P40825 983 aaKnown RBP3.35□□□□□ -1.87
NIP100YPL174C FRA1Q07825 749 aa3.35□□□□□ -1.87
NIP100YPL174C ENO2P00925 437 aaKnown RBP3.35□□□□□ -1.87
NIP100YPL174C UBP2Q01476 1272 aa3.35□□□□□ -1.87
NIP100YPL174C LCB5Q06147 687 aaKnown RBP3.35□□□□□ -1.87
NIP100YPL174C ATG32P40458 529 aa3.34□□□□□ -1.87
NIP100YPL174C CAF120P53836 1060 aa3.34□□□□□ -1.88
NIP100YPL174C OPT2Q06593 877 aa3.34□□□□□ -1.88
NIP100YPL174C TIF1P10081 395 aaKnown RBP3.33□□□□□ -1.88
NIP100YPL174C ISU1Q03020 165 aa3.33□□□□□ -1.88
NIP100YPL174C TCB1Q12466 1186 aa3.33□□□□□ -1.88
NIP100YPL174C YPR084WQ06821 456 aa3.32□□□□□ -1.88
NIP100YPL174C AHP1P38013 176 aaKnown RBP3.32□□□□□ -1.88
NIP100YPL174C UTP7P40055 554 aaKnown RBP3.31□□□□□ -1.88
NIP100YPL174C YFL034WP43564 1073 aa3.31□□□□□ -1.88
NIP100YPL174C ENO1P00924 437 aaKnown RBP3.31□□□□□ -1.88
NIP100YPL174C YJR098CP47139 656 aa3.31□□□□□ -1.88
NIP100YPL174C WTM2Q12206 467 aa3.31□□□□□ -1.88
NIP100YPL174C GLY1P37303 387 aaKnown RBP3.3□□□□□ -1.88
NIP100YPL174C SUP45P12385 437 aaKnown RBP3.3□□□□□ -1.88
NIP100YPL174C STE6P12866 1290 aa3.29□□□□□ -1.88
NIP100YPL174C RIM21P48565 533 aa3.29□□□□□ -1.88
NIP100YPL174C YGR035CP53222 116 aa3.28□□□□□ -1.88
NIP100YPL174C UTP13Q05946 817 aaKnown RBP3.28□□□□□ -1.88
NIP100YPL174C HDA3Q06623 655 aa3.28□□□□□ -1.88
NIP100YPL174C PDI1P17967 522 aaKnown RBP3.28□□□□□ -1.88
NIP100YPL174C YTA6P40328 754 aa3.28□□□□□ -1.88
NIP100YPL174C CBC2Q08920 208 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
NIP100YPL174C AIM9P40053 627 aaKnown RBP3.27□□□□□ -1.89
NIP100YPL174C YPL062WQ02781 134 aa3.27□□□□□ -1.89
NIP100YPL174C SIS2P36024 562 aa3.27□□□□□ -1.89
NIP100YPL174C HAL5P38970 855 aaKnown RBP3.26□□□□□ -1.89
NIP100YPL174C RGA1P39083 1007 aa3.26□□□□□ -1.89
NIP100YPL174C YIR007WP40566 764 aa3.26□□□□□ -1.89
NIP100YPL174C SPT2P06843 333 aaPredicted RBP3.25□□□□□ -1.89
NIP100YPL174C YMR265CQ03508 461 aaKnown RBP3.25□□□□□ -1.89
NIP100YPL174C NTH2P35172 780 aa3.25□□□□□ -1.89
NIP100YPL174C OSH7P38755 437 aa3.25□□□□□ -1.89
NIP100YPL174C TY1A-BLQ12266 440 aa3.25□□□□□ -1.89
NIP100YPL174C RPS6AP0CX37 236 aaKnown RBP3.24□□□□□ -1.89
NIP100YPL174C RPS6BP0CX38 236 aaPredicted RBP3.24□□□□□ -1.89
NIP100YPL174C CPS1P27614 576 aa3.24□□□□□ -1.89
NIP100YPL174C CYT1P07143 309 aa3.24□□□□□ -1.89
NIP100YPL174C CEM1P39525 442 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms