RNA–Protein interactions for RNA: YOR341W

RPA190, Transcript of RNA polymerase I largest subunit A190, yeastyeast

Gene RPA190, Length 4,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA190YOR341W YKR018CP36114 725 aa3.78□□□□□ -1.8
RPA190YOR341W TIM50Q02776 476 aa3.78□□□□□ -1.8
RPA190YOR341W SEC3P33332 1336 aaKnown RBP3.78□□□□□ -1.8
RPA190YOR341W PES4P39684 611 aa3.78□□□□□ -1.8
RPA190YOR341W MAK21Q12176 1025 aaKnown RBP3.78□□□□□ -1.8
RPA190YOR341W EAR1Q03212 550 aa3.78□□□□□ -1.81
RPA190YOR341W TOP1P04786 769 aa3.77□□□□□ -1.81
RPA190YOR341W MAM1P40065 302 aa3.77□□□□□ -1.81
RPA190YOR341W RRT6P53117 311 aaPredicted RBP3.77□□□□□ -1.81
RPA190YOR341W TIF6Q12522 245 aaKnown RBP3.77□□□□□ -1.81
RPA190YOR341W PFF1P38244 976 aa3.77□□□□□ -1.81
RPA190YOR341W SIR4P11978 1358 aa3.77□□□□□ -1.81
RPA190YOR341W NUP188P52593 1655 aaKnown RBP3.76□□□□□ -1.81
RPA190YOR341W COBP00163 385 aa3.76□□□□□ -1.81
RPA190YOR341W NCB2Q92317 146 aa3.76□□□□□ -1.81
RPA190YOR341W YRF1-1P0CX20 1796 aa3.76□□□□□ -1.81
RPA190YOR341W YRF1-5P0CX21 1796 aa3.76□□□□□ -1.81
RPA190YOR341W YRF1-8P0CX22 1796 aa3.76□□□□□ -1.81
RPA190YOR341W RPS24AP0CX31 135 aaKnown RBP3.76□□□□□ -1.81
RPA190YOR341W RPS24BP0CX32 135 aaKnown RBP3.76□□□□□ -1.81
RPA190YOR341W CWC15Q03772 175 aaKnown RBP3.76□□□□□ -1.81
RPA190YOR341W ZDS2P54786 942 aa3.76□□□□□ -1.81
RPA190YOR341W TAP42Q04372 366 aa3.76□□□□□ -1.81
RPA190YOR341W BDF2Q07442 638 aa3.76□□□□□ -1.81
RPA190YOR341W NOP53Q12080 455 aaKnown RBP3.76□□□□□ -1.81
RPA190YOR341W NYV1Q12255 253 aa3.76□□□□□ -1.81
RPA190YOR341W SNU66Q12420 587 aaPredicted RBP3.76□□□□□ -1.81
RPA190YOR341W TY1B-DR3Q99231 1755 aa3.75□□□□□ -1.81
RPA190YOR341W SEC7P11075 2009 aaKnown RBP3.75□□□□□ -1.81
RPA190YOR341W YKU70P32807 602 aa3.75□□□□□ -1.81
RPA190YOR341W SER1P33330 395 aaKnown RBP3.75□□□□□ -1.81
RPA190YOR341W RPN1P38764 993 aaKnown RBP3.75□□□□□ -1.81
RPA190YOR341W YBT1P32386 1661 aa3.75□□□□□ -1.81
RPA190YOR341W PRP43P53131 767 aaKnown RBP3.75□□□□□ -1.81
RPA190YOR341W GAS4Q08271 471 aa3.75□□□□□ -1.81
RPA190YOR341W SRF1Q12516 437 aa3.75□□□□□ -1.81
RPA190YOR341W ORC1P54784 914 aaPredicted RBP3.74□□□□□ -1.81
RPA190YOR341W TY1B-JR2P47100 1755 aaKnown RBP3.74□□□□□ -1.81
RPA190YOR341W TY1B-ER2Q03619 1755 aa3.74□□□□□ -1.81
RPA190YOR341W TY1B-MR1Q04214 1755 aa3.74□□□□□ -1.81
RPA190YOR341W TY1B-MR2Q04670 1755 aaKnown RBP3.74□□□□□ -1.81
RPA190YOR341W TY1B-LR1Q12088 1755 aaKnown RBP3.74□□□□□ -1.81
RPA190YOR341W TY1B-NL1Q12112 1755 aa3.74□□□□□ -1.81
RPA190YOR341W TY1B-GR1Q12141 1755 aa3.74□□□□□ -1.81
RPA190YOR341W TY1B-BLQ12490 1755 aa3.74□□□□□ -1.81
RPA190YOR341W RTG2P32608 588 aaKnown RBP3.73□□□□□ -1.81
RPA190YOR341W BUD27P43573 796 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81 RIP-Chip
RPA190YOR341W RRG1Q12167 365 aaPredicted RBP3.73□□□□□ -1.81
RPA190YOR341W TY3B-IQ7LHG5 1498 aaKnown RBP3.73□□□□□ -1.81
RPA190YOR341W MCM6P53091 1017 aaKnown RBP3.73□□□□□ -1.81
RPA190YOR341W SHC1P39000 512 aa3.73□□□□□ -1.81
RPA190YOR341W YFL040WP43562 540 aa3.73□□□□□ -1.81
RPA190YOR341W VAB2P40003 282 aa3.72□□□□□ -1.81
RPA190YOR341W ZDS1P50111 915 aaKnown RBP3.72□□□□□ -1.81
RPA190YOR341W SRC1Q03707 834 aa3.72□□□□□ -1.81
RPA190YOR341W GRE2Q12068 342 aaKnown RBP3.72□□□□□ -1.81
RPA190YOR341W LYS14P40971 790 aa3.72□□□□□ -1.81
RPA190YOR341W MSB3P48566 633 aaPredicted RBP3.72□□□□□ -1.81
RPA190YOR341W PDS5Q04264 1277 aa3.72□□□□□ -1.81
RPA190YOR341W HSP104P31539 908 aaKnown RBP3.72□□□□□ -1.81
RPA190YOR341W VHR2P40041 505 aa3.72□□□□□ -1.81
RPA190YOR341W DOT5P40553 215 aa3.72□□□□□ -1.81
RPA190YOR341W VPS53P47061 822 aa3.72□□□□□ -1.81
RPA190YOR341W CSE1P33307 960 aa3.72□□□□□ -1.81
RPA190YOR341W RRP8P38961 392 aaKnown RBP3.72□□□□□ -1.81
RPA190YOR341W NUG1P40010 520 aaKnown RBP3.72□□□□□ -1.81
RPA190YOR341W TY3A-GQ12173 290 aa3.72□□□□□ -1.81
RPA190YOR341W PHM7Q12252 991 aa3.72□□□□□ -1.81
RPA190YOR341W HAT1Q12341 374 aa3.72□□□□□ -1.81
RPA190YOR341W TY3A-IQ99219 290 aa3.72□□□□□ -1.81
RPA190YOR341W MHP1P43638 1398 aa3.71□□□□□ -1.81
RPA190YOR341W BUD2P33314 1104 aa3.71□□□□□ -1.81
RPA190YOR341W TPS3P38426 1054 aaKnown RBP3.71□□□□□ -1.81
RPA190YOR341W TEA1P47988 759 aa3.71□□□□□ -1.81
RPA190YOR341W FRK1Q03002 865 aaPredicted RBP3.71□□□□□ -1.81
RPA190YOR341W ECM16Q04217 1267 aaKnown RBP3.71□□□□□ -1.81
RPA190YOR341W MSC7P38694 644 aa3.71□□□□□ -1.82
RPA190YOR341W RRI2Q12348 645 aa3.71□□□□□ -1.82
RPA190YOR341W MCD4P36051 919 aa3.71□□□□□ -1.82
RPA190YOR341W RTR1P40084 226 aaPredicted RBP3.71□□□□□ -1.82
RPA190YOR341W CWH41P53008 833 aa3.71□□□□□ -1.82
RPA190YOR341W RPO41P13433 1351 aaKnown RBP3.71□□□□□ -1.82
RPA190YOR341W SNU71P53207 620 aaKnown RBP3.71□□□□□ -1.82
RPA190YOR341W ERO1Q03103 563 aa3.71□□□□□ -1.82
RPA190YOR341W JIP4Q03361 876 aa3.71□□□□□ -1.82
RPA190YOR341W SVF1Q05515 481 aa3.71□□□□□ -1.82
RPA190YOR341W RPS9AO13516 197 aaKnown RBP3.7□□□□□ -1.82
RPA190YOR341W JJJ2P46997 583 aa3.7□□□□□ -1.82
RPA190YOR341W ATG1P53104 897 aa3.7□□□□□ -1.82
RPA190YOR341W ACK1Q07622 623 aaPredicted RBP3.7□□□□□ -1.82
RPA190YOR341W HGH1P48362 394 aaKnown RBP3.7□□□□□ -1.82
RPA190YOR341W SSK22P25390 1331 aaPredicted RBP3.7□□□□□ -1.82
RPA190YOR341W RET1P22276 1149 aaKnown RBP3.7□□□□□ -1.82
RPA190YOR341W PWP2P25635 923 aaKnown RBP3.7□□□□□ -1.82
RPA190YOR341W GPT2P36148 743 aa3.7□□□□□ -1.82
RPA190YOR341W FET4P40988 552 aa3.7□□□□□ -1.82
RPA190YOR341W SDH5Q08230 162 aa3.7□□□□□ -1.82
RPA190YOR341W WHI3P34761 661 aaKnown RBP3.69□□□□□ -1.82
RPA190YOR341W GCN2P15442 1659 aa3.69□□□□□ -1.82
RPA190YOR341W MPP10P47083 593 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms