RNA–Protein interactions for RNA: YOR250C

CLP1, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeastyeast

Gene CLP1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLP1YOR250C MET22P32179 357 aa8.3□□□□□ -1.08
CLP1YOR250C UGA3P26370 528 aa8.29□□□□□ -1.08
CLP1YOR250C MAK16P10962 306 aaPredicted RBP8.29□□□□□ -1.08
CLP1YOR250C FIG4P42837 879 aa8.29□□□□□ -1.08
CLP1YOR250C MON2P48563 1636 aaPredicted RBP8.28□□□□□ -1.08
CLP1YOR250C TEC1P18412 486 aa8.26□□□□□ -1.09
CLP1YOR250C CSE4P36012 229 aa8.26□□□□□ -1.09
CLP1YOR250C RGA1P39083 1007 aa8.26□□□□□ -1.09
CLP1YOR250C NAF1P53919 492 aaKnown RBP8.26□□□□□ -1.09
CLP1YOR250C YDR444WQ04093 687 aa8.26□□□□□ -1.09
CLP1YOR250C EMW1P42842 904 aaKnown RBP8.25□□□□□ -1.09
CLP1YOR250C LCB5Q06147 687 aaKnown RBP8.25□□□□□ -1.09
CLP1YOR250C SKI3P17883 1432 aaKnown RBP8.24□□□□□ -1.09
CLP1YOR250C GAR1P28007 205 aaKnown RBP8.24□□□□□ -1.09
CLP1YOR250C YBL086CP38177 466 aa8.24□□□□□ -1.09
CLP1YOR250C PTK2P47116 818 aaKnown RBP8.24□□□□□ -1.09
CLP1YOR250C YPR084WQ06821 456 aa8.22□□□□□ -1.09
CLP1YOR250C SRF1Q12516 437 aa8.22□□□□□ -1.09
CLP1YOR250C BRL1P38770 471 aa8.21□□□□□ -1.1
CLP1YOR250C YPL062WQ02781 134 aa8.21□□□□□ -1.1
CLP1YOR250C GBP2P25555 427 aaKnown RBP RIP-Chip data8.2□□□□□ -1.1not detected
CLP1YOR250C SPT5P27692 1063 aaKnown RBP8.2□□□□□ -1.1
CLP1YOR250C NUP85P46673 744 aa8.2□□□□□ -1.1
CLP1YOR250C GUT2P32191 649 aa8.19□□□□□ -1.1
CLP1YOR250C TCB3Q03640 1545 aaKnown RBP8.18□□□□□ -1.1
CLP1YOR250C ARG82P07250 355 aa8.18□□□□□ -1.1
CLP1YOR250C YLR346CQ06139 101 aa8.18□□□□□ -1.1
CLP1YOR250C APP1P53933 587 aa8.17□□□□□ -1.1
CLP1YOR250C TFB3Q03290 321 aa8.17□□□□□ -1.1
CLP1YOR250C YBL036CP38197 257 aa8.16□□□□□ -1.1
CLP1YOR250C ITT1Q04638 464 aa8.16□□□□□ -1.1
CLP1YOR250C FRA1Q07825 749 aa8.16□□□□□ -1.1
CLP1YOR250C AAD14P42884 376 aa8.15□□□□□ -1.1
CLP1YOR250C MKS1P34072 584 aa8.14□□□□□ -1.11
CLP1YOR250C STE20Q03497 939 aaKnown RBP8.14□□□□□ -1.11
CLP1YOR250C MRX12P47084 519 aa8.13□□□□□ -1.11
CLP1YOR250C OPT2Q06593 877 aa8.13□□□□□ -1.11
CLP1YOR250C FBP26P32604 452 aa8.11□□□□□ -1.11
CLP1YOR250C GLY1P37303 387 aaKnown RBP8.11□□□□□ -1.11
CLP1YOR250C LEO1P38439 464 aa8.11□□□□□ -1.11
CLP1YOR250C YDL176WQ12027 708 aa8.1□□□□□ -1.11
CLP1YOR250C LSC2P53312 427 aa8.09□□□□□ -1.11
CLP1YOR250C MIP1P15801 1254 aa8.08□□□□□ -1.12
CLP1YOR250C PKC1P24583 1151 aa8.08□□□□□ -1.12
CLP1YOR250C ACO2P39533 789 aa8.08□□□□□ -1.12
CLP1YOR250C DFG5Q05031 458 aa8.08□□□□□ -1.12
CLP1YOR250C BDS1Q08347 646 aa8.08□□□□□ -1.12
CLP1YOR250C STE6P12866 1290 aa8.07□□□□□ -1.12
CLP1YOR250C ATG20Q07528 640 aa8.07□□□□□ -1.12
CLP1YOR250C MCM16Q12262 181 aa8.07□□□□□ -1.12
CLP1YOR250C APL6P46682 809 aa8.06□□□□□ -1.12
CLP1YOR250C HGH1P48362 394 aaKnown RBP8.06□□□□□ -1.12
CLP1YOR250C YPP1P46951 817 aa8.05□□□□□ -1.12
CLP1YOR250C YJR098CP47139 656 aa8.05□□□□□ -1.12
CLP1YOR250C UBP2Q01476 1272 aa8.05□□□□□ -1.12
CLP1YOR250C ISU1Q03020 165 aa8.05□□□□□ -1.12
CLP1YOR250C RPP2BP02400 110 aaKnown RBP8.04□□□□□ -1.12
CLP1YOR250C EMP47P43555 445 aa8.04□□□□□ -1.12
CLP1YOR250C SCW11P53189 542 aa8.04□□□□□ -1.12
CLP1YOR250C YDJ1P25491 409 aaKnown RBP8.03□□□□□ -1.12
CLP1YOR250C BIO2P32451 375 aa8.03□□□□□ -1.12
CLP1YOR250C TY1A-BLQ12266 440 aa8.03□□□□□ -1.12
CLP1YOR250C SUP45P12385 437 aaKnown RBP8.03□□□□□ -1.12
CLP1YOR250C TY1B-DR4Q07793 1604 aa8.02□□□□□ -1.13
CLP1YOR250C DLD1P32891 587 aa8.01□□□□□ -1.13
CLP1YOR250C ATG3P40344 310 aa8.01□□□□□ -1.13
CLP1YOR250C CAF120P53836 1060 aa8.01□□□□□ -1.13
CLP1YOR250C UTP13Q05946 817 aaKnown RBP8.01□□□□□ -1.13
CLP1YOR250C ISF1P32488 338 aa8□□□□□ -1.13
CLP1YOR250C TAF7Q05021 590 aa8□□□□□ -1.13
CLP1YOR250C TCB1Q12466 1186 aa7.99□□□□□ -1.13
CLP1YOR250C CHD1P32657 1468 aa7.99□□□□□ -1.13
CLP1YOR250C VTC4P47075 721 aa7.98□□□□□ -1.13
CLP1YOR250C SPT2P06843 333 aaPredicted RBP7.97□□□□□ -1.13
CLP1YOR250C YNL108CP53929 270 aa7.97□□□□□ -1.13
CLP1YOR250C ISR1Q06098 443 aaKnown RBP7.97□□□□□ -1.13
CLP1YOR250C DLD3P39976 496 aaKnown RBP7.96□□□□□ -1.14
CLP1YOR250C YJL007CP47080 104 aa7.96□□□□□ -1.14
CLP1YOR250C HSL1P34244 1518 aa7.96□□□□□ -1.14
CLP1YOR250C ENO2P00925 437 aaKnown RBP7.95□□□□□ -1.14
CLP1YOR250C OSH7P38755 437 aa7.95□□□□□ -1.14
CLP1YOR250C YIR007WP40566 764 aa7.95□□□□□ -1.14
CLP1YOR250C RIM21P48565 533 aa7.94□□□□□ -1.14
CLP1YOR250C MMS22Q06164 1454 aa7.93□□□□□ -1.14
CLP1YOR250C UTR2P32623 467 aa7.92□□□□□ -1.14
CLP1YOR250C WTM2Q12206 467 aa7.92□□□□□ -1.14
CLP1YOR250C SPT6P23615 1451 aaKnown RBP7.92□□□□□ -1.14
CLP1YOR250C DAL1P32375 460 aa7.91□□□□□ -1.14
CLP1YOR250C SOH1P38633 127 aa7.9□□□□□ -1.14
CLP1YOR250C HAL5P38970 855 aaKnown RBP7.9□□□□□ -1.14
CLP1YOR250C BIM1P40013 344 aa7.9□□□□□ -1.14
CLP1YOR250C ROG3P43602 733 aa7.9□□□□□ -1.14
CLP1YOR250C TY1A-MR1Q04215 440 aa7.9□□□□□ -1.14
CLP1YOR250C TBS1P38114 1094 aa7.89□□□□□ -1.15
CLP1YOR250C XRN1P22147 1528 aaKnown RBP7.88□□□□□ -1.15
CLP1YOR250C DAT1P13483 248 aaKnown RBP7.88□□□□□ -1.15
CLP1YOR250C MSN5P52918 1224 aa7.88□□□□□ -1.15
CLP1YOR250C DNA2P38859 1522 aa7.88□□□□□ -1.15
CLP1YOR250C CDC19P00549 500 aaKnown RBP7.87□□□□□ -1.15
CLP1YOR250C ATG32P40458 529 aa7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 63.3 ms