RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W GUT2P32191 649 aa6.17□□□□□ -1.42
VPS17YOR132W TAF7Q05021 590 aa6.17□□□□□ -1.42
VPS17YOR132W SUP45P12385 437 aaKnown RBP6.17□□□□□ -1.42
VPS17YOR132W AIR1P40507 360 aaKnown RBP6.17□□□□□ -1.42
VPS17YOR132W RPL34BP40525 121 aaKnown RBP6.17□□□□□ -1.42
VPS17YOR132W ATG32P40458 529 aa6.16□□□□□ -1.42
VPS17YOR132W TRK1P12685 1235 aa6.15□□□□□ -1.42
VPS17YOR132W YPP1P46951 817 aa6.15□□□□□ -1.42
VPS17YOR132W STE20Q03497 939 aaKnown RBP6.15□□□□□ -1.42
VPS17YOR132W YPR084WQ06821 456 aa6.15□□□□□ -1.42
VPS17YOR132W TIF1P10081 395 aaKnown RBP6.14□□□□□ -1.43
VPS17YOR132W FRA1Q07825 749 aa6.14□□□□□ -1.43
VPS17YOR132W MCM16Q12262 181 aa6.14□□□□□ -1.43
VPS17YOR132W MRX12P47084 519 aa6.13□□□□□ -1.43
VPS17YOR132W MET32Q12041 191 aa6.13□□□□□ -1.43
VPS17YOR132W ENO2P00925 437 aaKnown RBP6.12□□□□□ -1.43
VPS17YOR132W MRT4P33201 236 aaKnown RBP6.12□□□□□ -1.43
VPS17YOR132W EMP47P43555 445 aa6.12□□□□□ -1.43
VPS17YOR132W RTG2P32608 588 aaKnown RBP6.11□□□□□ -1.43
VPS17YOR132W HST3P53687 447 aa6.11□□□□□ -1.43
VPS17YOR132W ITT1Q04638 464 aa6.11□□□□□ -1.43
VPS17YOR132W AFT1P22149 690 aa6.1□□□□□ -1.43
VPS17YOR132W ISF1P32488 338 aa6.1□□□□□ -1.43
VPS17YOR132W ASH1P34233 588 aa6.1□□□□□ -1.43
VPS17YOR132W EMW1P42842 904 aaKnown RBP6.1□□□□□ -1.43
VPS17YOR132W RTT106P40161 455 aa6.09□□□□□ -1.43
VPS17YOR132W RIM21P48565 533 aa6.09□□□□□ -1.43
VPS17YOR132W APP1P53933 587 aa6.09□□□□□ -1.43
VPS17YOR132W ATG3P40344 310 aa6.08□□□□□ -1.44
VPS17YOR132W UGA3P26370 528 aa6.07□□□□□ -1.44
VPS17YOR132W MSB3P48566 633 aaPredicted RBP6.07□□□□□ -1.44
VPS17YOR132W MRX10Q05648 414 aa6.07□□□□□ -1.44
VPS17YOR132W ATG20Q07528 640 aa6.07□□□□□ -1.44
VPS17YOR132W YPR204WQ08995 1032 aa6.07□□□□□ -1.44
VPS17YOR132W RLF2Q12495 606 aa6.07□□□□□ -1.44
VPS17YOR132W YBL086CP38177 466 aa6.06□□□□□ -1.44
VPS17YOR132W GCR2Q01722 534 aa6.06□□□□□ -1.44
VPS17YOR132W ENV9Q08651 330 aa6.06□□□□□ -1.44
VPS17YOR132W ENO1P00924 437 aaKnown RBP6.05□□□□□ -1.44
VPS17YOR132W MKS1P34072 584 aa6.05□□□□□ -1.44
VPS17YOR132W APL6P46682 809 aa6.05□□□□□ -1.44
VPS17YOR132W UTP13Q05946 817 aaKnown RBP6.05□□□□□ -1.44
VPS17YOR132W BRE2P43132 505 aa6.04□□□□□ -1.44
VPS17YOR132W FBP26P32604 452 aa6.03□□□□□ -1.44
VPS17YOR132W RDS2P19541 446 aaKnown RBP6.02□□□□□ -1.45
VPS17YOR132W SIS2P36024 562 aa6.02□□□□□ -1.45
VPS17YOR132W SOH1P38633 127 aa6.02□□□□□ -1.45
VPS17YOR132W ISR1Q06098 443 aaKnown RBP6.02□□□□□ -1.45
VPS17YOR132W YJR115WP47152 169 aa6.01□□□□□ -1.45
VPS17YOR132W ISU1Q03020 165 aa6.01□□□□□ -1.45
VPS17YOR132W SRF1Q12516 437 aa6.01□□□□□ -1.45
VPS17YOR132W DFG5Q05031 458 aa6.01□□□□□ -1.45
VPS17YOR132W RPP2BP02400 110 aaKnown RBP6□□□□□ -1.45
VPS17YOR132W BDS1Q08347 646 aa6□□□□□ -1.45
VPS17YOR132W ARG82P07250 355 aa5.99□□□□□ -1.45
VPS17YOR132W STE6P12866 1290 aa5.99□□□□□ -1.45
VPS17YOR132W PTK2P47116 818 aaKnown RBP5.99□□□□□ -1.45
VPS17YOR132W PEP12P32854 288 aa5.98□□□□□ -1.45
VPS17YOR132W TTI1P36097 1038 aa5.98□□□□□ -1.45
VPS17YOR132W HAL5P38970 855 aaKnown RBP5.98□□□□□ -1.45
VPS17YOR132W RGA2Q06407 1009 aa5.97□□□□□ -1.45
VPS17YOR132W AAD14P42884 376 aa5.96□□□□□ -1.46
VPS17YOR132W SPT2P06843 333 aaPredicted RBP5.95□□□□□ -1.46
VPS17YOR132W NUP85P46673 744 aa5.95□□□□□ -1.46
VPS17YOR132W HDA3Q06623 655 aa5.95□□□□□ -1.46
VPS17YOR132W DAT1P13483 248 aaKnown RBP5.94□□□□□ -1.46
VPS17YOR132W UTR2P32623 467 aa5.94□□□□□ -1.46
VPS17YOR132W MIP1P15801 1254 aa5.94□□□□□ -1.46
VPS17YOR132W SSA4P22202 642 aaKnown RBP5.94□□□□□ -1.46
VPS17YOR132W CPS1P27614 576 aa5.94□□□□□ -1.46
VPS17YOR132W TBS1P38114 1094 aa5.94□□□□□ -1.46
VPS17YOR132W DLD3P39976 496 aaKnown RBP5.94□□□□□ -1.46
VPS17YOR132W KTR7P40504 517 aa5.94□□□□□ -1.46
VPS17YOR132W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
VPS17YOR132W YFL034WP43564 1073 aa5.93□□□□□ -1.46
VPS17YOR132W YLR346CQ06139 101 aa5.92□□□□□ -1.46
VPS17YOR132W WTM2Q12206 467 aa5.92□□□□□ -1.46
VPS17YOR132W TSC13Q99190 310 aa5.92□□□□□ -1.46
VPS17YOR132W TGL4P36165 910 aa5.91□□□□□ -1.46
VPS17YOR132W LSC2P53312 427 aa5.91□□□□□ -1.46
VPS17YOR132W AIM9P40053 627 aaKnown RBP5.91□□□□□ -1.46
VPS17YOR132W GAL2P13181 574 aa5.9□□□□□ -1.47
VPS17YOR132W PHO87P25360 923 aa5.9□□□□□ -1.47
VPS17YOR132W MET22P32179 357 aa5.9□□□□□ -1.47
VPS17YOR132W SLX8P40072 274 aa5.9□□□□□ -1.47
VPS17YOR132W HAP4P14064 554 aa5.89□□□□□ -1.47
VPS17YOR132W PDI1P17967 522 aaKnown RBP5.89□□□□□ -1.47
VPS17YOR132W DLD1P32891 587 aa5.89□□□□□ -1.47
VPS17YOR132W YDR444WQ04093 687 aa5.89□□□□□ -1.47
VPS17YOR132W YJR098CP47139 656 aa5.88□□□□□ -1.47
VPS17YOR132W ACS2P52910 683 aaKnown RBP5.88□□□□□ -1.47
VPS17YOR132W ECM23Q02710 187 aa5.88□□□□□ -1.47
VPS17YOR132W LCB5Q06147 687 aaKnown RBP5.88□□□□□ -1.47
VPS17YOR132W OPT2Q06593 877 aa5.88□□□□□ -1.47
VPS17YOR132W SWI5P08153 709 aa5.87□□□□□ -1.47
VPS17YOR132W PUP1P25043 261 aa5.87□□□□□ -1.47
VPS17YOR132W NTH2P35172 780 aa5.87□□□□□ -1.47
VPS17YOR132W UBP2Q01476 1272 aa5.87□□□□□ -1.47
VPS17YOR132W RGA1P39083 1007 aa5.86□□□□□ -1.47
VPS17YOR132W SUB2Q07478 446 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms