RNA–Protein interactions for RNA: YOR043W

WHI2, Transcript of Protein required for full activation of the general stress response, yeast

Gene WHI2, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
WHI2	YOR043W	ARH1	P48360	493 aa		8.02	□□□□□ -1.13
WHI2	YOR043W	CFT1	Q06632	1357 aa	Known RBP	8.01	□□□□□ -1.13
WHI2	YOR043W	SRC1	Q03707	834 aa		8	□□□□□ -1.13
WHI2	YOR043W	RCM1	P53972	490 aa		7.99	□□□□□ -1.13
WHI2	YOR043W	YNR029C	P53729	429 aa	Known RBP	7.98	□□□□□ -1.13
WHI2	YOR043W	USO1	P25386	1790 aa		7.97	□□□□□ -1.13
WHI2	YOR043W	RGA1	P39083	1007 aa		7.97	□□□□□ -1.13
WHI2	YOR043W	MID1	P41821	548 aa		7.97	□□□□□ -1.13
WHI2	YOR043W	NST1	P53935	1240 aa		7.97	□□□□□ -1.13
WHI2	YOR043W	PPH3	P32345	308 aa		7.95	□□□□□ -1.14
WHI2	YOR043W	MIF2	P35201	549 aa		7.95	□□□□□ -1.14
WHI2	YOR043W	SPT23	P35210	1082 aa		7.94	□□□□□ -1.14
WHI2	YOR043W	TY1B-NL2	Q99337	1749 aa	Known RBP	7.94	□□□□□ -1.14
WHI2	YOR043W	MLP1	Q02455	1875 aa	Known RBP	7.94	□□□□□ -1.14
WHI2	YOR043W	PEX29	Q03370	554 aa		7.94	□□□□□ -1.14
WHI2	YOR043W	YMR196W	Q04336	1088 aa		7.94	□□□□□ -1.14
WHI2	YOR043W	ATH1	P48016	1211 aa		7.93	□□□□□ -1.14
WHI2	YOR043W	PSK1	P31374	1356 aa		7.92	□□□□□ -1.14
WHI2	YOR043W	CPS1	P27614	576 aa		7.92	□□□□□ -1.14
WHI2	YOR043W	YML133C	Q03099	1374 aa		7.91	□□□□□ -1.14
WHI2	YOR043W	YLL067C	Q07888	1374 aa		7.91	□□□□□ -1.14
WHI2	YOR043W	YLL066C	Q99208	1374 aa		7.91	□□□□□ -1.14
WHI2	YOR043W	THI12	P42883	340 aa		7.9	□□□□□ -1.14
WHI2	YOR043W	THI5	P43534	340 aa		7.9	□□□□□ -1.14
WHI2	YOR043W	THI11	P47183	340 aa		7.9	□□□□□ -1.14
WHI2	YOR043W	THI13	Q07748	340 aa		7.9	□□□□□ -1.14
WHI2	YOR043W	GUT1	P32190	709 aa		7.89	□□□□□ -1.15
WHI2	YOR043W	LEU2	P04173	364 aa	Predicted RBP	7.88	□□□□□ -1.15
WHI2	YOR043W	TRK1	P12685	1235 aa		7.87	□□□□□ -1.15
WHI2	YOR043W	YEF3	P16521	1044 aa	Known RBP	7.87	□□□□□ -1.15
WHI2	YOR043W	PRS1	P32895	427 aa	Known RBP	7.86	□□□□□ -1.15
WHI2	YOR043W	HAP5	Q02516	242 aa		7.86	□□□□□ -1.15
WHI2	YOR043W	PTC3	P34221	468 aa	Known RBP	7.85	□□□□□ -1.15
WHI2	YOR043W	MTR4	P47047	1073 aa	Known RBP	7.85	□□□□□ -1.15
WHI2	YOR043W	PDI1	P17967	522 aa	Known RBP	7.83	□□□□□ -1.16
WHI2	YOR043W	CSE4	P36012	229 aa		7.83	□□□□□ -1.16
WHI2	YOR043W	RPS24A	P0CX31	135 aa	Known RBP	7.82	□□□□□ -1.16
WHI2	YOR043W	RPS24B	P0CX32	135 aa	Known RBP	7.82	□□□□□ -1.16
WHI2	YOR043W	EDS1	P38073	919 aa		7.82	□□□□□ -1.16
WHI2	YOR043W	BNI4	P53858	892 aa		7.82	□□□□□ -1.16
WHI2	YOR043W	KAR2	P16474	682 aa	Known RBP	7.81	□□□□□ -1.16
WHI2	YOR043W	TAP42	Q04372	366 aa		7.81	□□□□□ -1.16
WHI2	YOR043W	HIM1	Q06674	414 aa		7.81	□□□□□ -1.16
WHI2	YOR043W	PTC2	P39966	464 aa	Known RBP	7.81	□□□□□ -1.16
WHI2	YOR043W	RTF1	P53064	558 aa		7.81	□□□□□ -1.16
WHI2	YOR043W	ADE6	P38972	1358 aa	Known RBP	7.8	□□□□□ -1.16
WHI2	YOR043W	PRP43	P53131	767 aa	Known RBP	7.8	□□□□□ -1.16
WHI2	YOR043W	GRX4	P32642	244 aa		7.79	□□□□□ -1.16
WHI2	YOR043W	YML082W	Q04533	649 aa	Known RBP	7.79	□□□□□ -1.16
WHI2	YOR043W	GAS4	Q08271	471 aa		7.79	□□□□□ -1.16
WHI2	YOR043W	AI4	P03878	556 aa		7.78	□□□□□ -1.16
WHI2	YOR043W	MPH3	P0CE00	602 aa		7.78	□□□□□ -1.16
WHI2	YOR043W	MAK11	P20484	414 aa	Known RBP	7.78	□□□□□ -1.16
WHI2	YOR043W	SOL3	P38858	249 aa		7.78	□□□□□ -1.16
WHI2	YOR043W	PAP2	P53632	584 aa	Known RBP	7.78	□□□□□ -1.16
WHI2	YOR043W	YDL144C	Q07589	356 aa		7.78	□□□□□ -1.16
WHI2	YOR043W	AUS1	Q08409	1394 aa		7.77	□□□□□ -1.16
WHI2	YOR043W	IOC4	Q04213	475 aa		7.77	□□□□□ -1.17
WHI2	YOR043W	RRP46	P53256	223 aa	Predicted RBP	7.76	□□□□□ -1.17
WHI2	YOR043W	RPP0	P05317	312 aa	Known RBP	7.75	□□□□□ -1.17
WHI2	YOR043W	RTR1	P40084	226 aa	Predicted RBP	7.75	□□□□□ -1.17
WHI2	YOR043W	ILV3	P39522	585 aa	Known RBP	7.75	□□□□□ -1.17
WHI2	YOR043W	VPS27	P40343	622 aa	Known RBP	7.75	□□□□□ -1.17
WHI2	YOR043W	MPP10	P47083	593 aa	Known RBP	7.75	□□□□□ -1.17
WHI2	YOR043W	TY4B-H	P0C2J7	1802 aa		7.74	□□□□□ -1.17
WHI2	YOR043W	TY4B-J	P47024	1803 aa		7.74	□□□□□ -1.17
WHI2	YOR043W	PRP45	P28004	379 aa	Predicted RBP	7.74	□□□□□ -1.17
WHI2	YOR043W	CDC45	Q08032	650 aa		7.74	□□□□□ -1.17
WHI2	YOR043W	RAS1	P01119	309 aa		7.73	□□□□□ -1.17
WHI2	YOR043W	PRP5	P21372	849 aa	Predicted RBP	7.73	□□□□□ -1.17
WHI2	YOR043W	SNF2	P22082	1703 aa		7.72	□□□□□ -1.17
WHI2	YOR043W	MPC54	Q08550	464 aa		7.72	□□□□□ -1.17
WHI2	YOR043W	RVB2	Q12464	471 aa	Known RBP	7.72	□□□□□ -1.17
WHI2	YOR043W	NOP2	P40991	618 aa	Known RBP	7.71	□□□□□ -1.18
WHI2	YOR043W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.18	not detected
WHI2	YOR043W	RPO41	P13433	1351 aa	Known RBP	7.7	□□□□□ -1.18
WHI2	YOR043W	SUI2	P20459	304 aa	Known RBP	7.7	□□□□□ -1.18
WHI2	YOR043W	PRD1	P25375	712 aa		7.7	□□□□□ -1.18
WHI2	YOR043W	FUN12	P39730	1002 aa	Known RBP	7.7	□□□□□ -1.18
WHI2	YOR043W	RAM2	P29703	316 aa		7.68	□□□□□ -1.18
WHI2	YOR043W	SAP155	P43612	1002 aa		7.68	□□□□□ -1.18
WHI2	YOR043W	MSB3	P48566	633 aa	Predicted RBP	7.68	□□□□□ -1.18
WHI2	YOR043W	THI22	Q06490	572 aa		7.68	□□□□□ -1.18
WHI2	YOR043W	COQ8	P27697	501 aa		7.68	□□□□□ -1.18
WHI2	YOR043W	SLM3	Q12093	417 aa		7.68	□□□□□ -1.18
WHI2	YOR043W	TPD3	P31383	635 aa		7.67	□□□□□ -1.18
WHI2	YOR043W	AKL1	P38080	1108 aa	Known RBP	7.67	□□□□□ -1.18
WHI2	YOR043W	YIL177C	P40434	1758 aa		7.66	□□□□□ -1.18
WHI2	YOR043W	YJL225C	P40889	1758 aa		7.66	□□□□□ -1.18
WHI2	YOR043W	RRP5	Q05022	1729 aa	Known RBP	7.66	□□□□□ -1.18
WHI2	YOR043W	DSD1	P53095	428 aa		7.65	□□□□□ -1.18
WHI2	YOR043W	NMA111	P53920	997 aa		7.65	□□□□□ -1.18
WHI2	YOR043W	YRF1-2	P40105	1681 aa		7.65	□□□□□ -1.19
WHI2	YOR043W	RTT109	Q07794	436 aa		7.64	□□□□□ -1.19
WHI2	YOR043W	TCB1	Q12466	1186 aa		7.64	□□□□□ -1.19
WHI2	YOR043W	ENT1	Q12518	454 aa		7.64	□□□□□ -1.19
WHI2	YOR043W	XKS1	P42826	600 aa		7.63	□□□□□ -1.19
WHI2	YOR043W	YRB30	P53107	440 aa	Predicted RBP	7.63	□□□□□ -1.19
WHI2	YOR043W	HSP104	P31539	908 aa	Known RBP	7.62	□□□□□ -1.19
WHI2	YOR043W	HEF3	P53978	1044 aa	Known RBP	7.62	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms