RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C YPR204WQ08995 1032 aa5.41□□□□□ -1.54
SHE4YOR035C RTG2P32608 588 aaKnown RBP5.41□□□□□ -1.54
SHE4YOR035C MCM16Q12262 181 aa5.41□□□□□ -1.54
SHE4YOR035C GUT2P32191 649 aa5.4□□□□□ -1.55
SHE4YOR035C IXR1P33417 597 aa5.4□□□□□ -1.55
SHE4YOR035C VAC17P25591 423 aa5.39□□□□□ -1.55
SHE4YOR035C YPP1P46951 817 aa5.39□□□□□ -1.55
SHE4YOR035C ISF1P32488 338 aa5.38□□□□□ -1.55
SHE4YOR035C SYH1Q02875 849 aaKnown RBP5.38□□□□□ -1.55
SHE4YOR035C STE20Q03497 939 aaKnown RBP5.37□□□□□ -1.55
SHE4YOR035C EMP47P43555 445 aa5.37□□□□□ -1.55
SHE4YOR035C ENO1P00924 437 aaKnown RBP5.36□□□□□ -1.55
SHE4YOR035C RIM21P48565 533 aa5.36□□□□□ -1.55
SHE4YOR035C ITT1Q04638 464 aa5.36□□□□□ -1.55
SHE4YOR035C YPR084WQ06821 456 aa5.36□□□□□ -1.55
SHE4YOR035C CLA4P48562 842 aa5.35□□□□□ -1.55
SHE4YOR035C HED1Q03937 162 aa5.35□□□□□ -1.55
SHE4YOR035C FRA1Q07825 749 aa5.35□□□□□ -1.55
SHE4YOR035C MRX12P47084 519 aa5.34□□□□□ -1.56
SHE4YOR035C MRX10Q05648 414 aa5.33□□□□□ -1.56
SHE4YOR035C ENV9Q08651 330 aa5.33□□□□□ -1.56
SHE4YOR035C ATG3P40344 310 aa5.33□□□□□ -1.56
SHE4YOR035C APP1P53933 587 aa5.33□□□□□ -1.56
SHE4YOR035C CPS1P27614 576 aa5.31□□□□□ -1.56
SHE4YOR035C TTI1P36097 1038 aa5.31□□□□□ -1.56
SHE4YOR035C AIR1P40507 360 aaKnown RBP5.31□□□□□ -1.56
SHE4YOR035C CDC4P07834 779 aa5.3□□□□□ -1.56
SHE4YOR035C SOH1P38633 127 aa5.29□□□□□ -1.56
SHE4YOR035C RDS2P19541 446 aaKnown RBP5.29□□□□□ -1.56
SHE4YOR035C SIS2P36024 562 aa5.29□□□□□ -1.56
SHE4YOR035C KTR7P40504 517 aa5.29□□□□□ -1.56
SHE4YOR035C EMW1P42842 904 aaKnown RBP5.29□□□□□ -1.56
SHE4YOR035C MET32Q12041 191 aa5.29□□□□□ -1.56
SHE4YOR035C SSA4P22202 642 aaKnown RBP5.28□□□□□ -1.56
SHE4YOR035C MRT4P33201 236 aaKnown RBP5.28□□□□□ -1.56
SHE4YOR035C ATG20Q07528 640 aa5.28□□□□□ -1.56
SHE4YOR035C MKS1P34072 584 aa5.28□□□□□ -1.56
SHE4YOR035C HST3P53687 447 aa5.27□□□□□ -1.57
SHE4YOR035C APL6P46682 809 aa5.27□□□□□ -1.57
SHE4YOR035C ISR1Q06098 443 aaKnown RBP5.27□□□□□ -1.57
SHE4YOR035C PEP12P32854 288 aa5.26□□□□□ -1.57
SHE4YOR035C ASH1P34233 588 aa5.26□□□□□ -1.57
SHE4YOR035C UTP13Q05946 817 aaKnown RBP5.26□□□□□ -1.57
SHE4YOR035C TRK1P12685 1235 aa5.26□□□□□ -1.57
SHE4YOR035C DFG5Q05031 458 aa5.24□□□□□ -1.57
SHE4YOR035C AFT1P22149 690 aa5.24□□□□□ -1.57
SHE4YOR035C UGA3P26370 528 aa5.24□□□□□ -1.57
SHE4YOR035C TGL4P36165 910 aa5.24□□□□□ -1.57
SHE4YOR035C YBL086CP38177 466 aa5.24□□□□□ -1.57
SHE4YOR035C HAL5P38970 855 aaKnown RBP5.24□□□□□ -1.57
SHE4YOR035C FBP26P32604 452 aa5.23□□□□□ -1.57
SHE4YOR035C SUB2Q07478 446 aaKnown RBP5.23□□□□□ -1.57
SHE4YOR035C MIP1P15801 1254 aa5.22□□□□□ -1.57
SHE4YOR035C ISU1Q03020 165 aa5.22□□□□□ -1.57
SHE4YOR035C UTR2P32623 467 aa5.22□□□□□ -1.57
SHE4YOR035C SRC1Q03707 834 aa5.22□□□□□ -1.57
SHE4YOR035C BDS1Q08347 646 aa5.21□□□□□ -1.57
SHE4YOR035C DAT1P13483 248 aaKnown RBP5.21□□□□□ -1.58
SHE4YOR035C RTT106P40161 455 aa5.21□□□□□ -1.58
SHE4YOR035C ECM23Q02710 187 aa5.21□□□□□ -1.58
SHE4YOR035C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
SHE4YOR035C RPP2BP02400 110 aaKnown RBP5.2□□□□□ -1.58
SHE4YOR035C PUP1P25043 261 aa5.2□□□□□ -1.58
SHE4YOR035C HDA3Q06623 655 aa5.2□□□□□ -1.58
SHE4YOR035C STE6P12866 1290 aa5.2□□□□□ -1.58
SHE4YOR035C GAL2P13181 574 aa5.2□□□□□ -1.58
SHE4YOR035C TBS1P38114 1094 aa5.2□□□□□ -1.58
SHE4YOR035C MSB3P48566 633 aaPredicted RBP5.2□□□□□ -1.58
SHE4YOR035C PHO87P25360 923 aa5.19□□□□□ -1.58
SHE4YOR035C YFL034WP43564 1073 aa5.19□□□□□ -1.58
SHE4YOR035C SRF1Q12516 437 aa5.19□□□□□ -1.58
SHE4YOR035C SPT2P06843 333 aaPredicted RBP5.19□□□□□ -1.58
SHE4YOR035C PDI1P17967 522 aaKnown RBP5.19□□□□□ -1.58
SHE4YOR035C AIM9P40053 627 aaKnown RBP5.19□□□□□ -1.58
SHE4YOR035C YJR115WP47152 169 aa5.19□□□□□ -1.58
SHE4YOR035C YML083CQ04526 418 aa5.19□□□□□ -1.58
SHE4YOR035C NOB1Q08444 459 aaKnown RBP5.19□□□□□ -1.58
SHE4YOR035C BRE2P43132 505 aa5.18□□□□□ -1.58
SHE4YOR035C WTM2Q12206 467 aa5.18□□□□□ -1.58
SHE4YOR035C ARG82P07250 355 aa5.18□□□□□ -1.58
SHE4YOR035C SSA1P10591 642 aaKnown RBP5.18□□□□□ -1.58
SHE4YOR035C ACS2P52910 683 aaKnown RBP5.18□□□□□ -1.58
SHE4YOR035C TSC13Q99190 310 aa5.18□□□□□ -1.58
SHE4YOR035C HAP4P14064 554 aa5.17□□□□□ -1.58
SHE4YOR035C UBX7P38349 436 aa5.17□□□□□ -1.58
SHE4YOR035C DLD3P39976 496 aaKnown RBP5.17□□□□□ -1.58
SHE4YOR035C PTK2P47116 818 aaKnown RBP5.17□□□□□ -1.58
SHE4YOR035C GCR2Q01722 534 aa5.17□□□□□ -1.58
SHE4YOR035C AAD14P42884 376 aa5.16□□□□□ -1.58
SHE4YOR035C NTH2P35172 780 aa5.15□□□□□ -1.58
SHE4YOR035C RPS6AP0CX37 236 aaKnown RBP5.15□□□□□ -1.59
SHE4YOR035C RPS6BP0CX38 236 aaPredicted RBP5.15□□□□□ -1.59
SHE4YOR035C SLX8P40072 274 aa5.15□□□□□ -1.59
SHE4YOR035C GAS4Q08271 471 aa5.15□□□□□ -1.59
SHE4YOR035C SWI5P08153 709 aa5.14□□□□□ -1.59
SHE4YOR035C RPL34AP87262 121 aaPredicted RBP5.14□□□□□ -1.59
SHE4YOR035C UTP7P40055 554 aaKnown RBP5.13□□□□□ -1.59
SHE4YOR035C ROM1P53046 1155 aa5.13□□□□□ -1.59
SHE4YOR035C DLD1P32891 587 aa5.13□□□□□ -1.59
SHE4YOR035C GEF1P37020 779 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms