RNA–Protein interactions for RNA: YOR006C

TSR3, Transcript of Protein required for 20S pre-rRNA processing, yeastyeast

Gene TSR3, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR3YOR006C RAM1P22007 431 aa9.61□□□□□ -0.87
TSR3YOR006C NUP170P38181 1502 aa9.61□□□□□ -0.87
TSR3YOR006C ULS1Q08562 1619 aa9.6□□□□□ -0.87
TSR3YOR006C NIS1P53939 407 aa9.59□□□□□ -0.87
TSR3YOR006C YMR196WQ04336 1088 aa9.59□□□□□ -0.87
TSR3YOR006C PDR12Q02785 1511 aa9.59□□□□□ -0.87
TSR3YOR006C PDR15Q04182 1529 aaKnown RBP9.59□□□□□ -0.87
TSR3YOR006C SPO14P36126 1683 aa9.58□□□□□ -0.88
TSR3YOR006C SIT4P20604 311 aa9.56□□□□□ -0.88
TSR3YOR006C BCK2P33306 851 aa9.56□□□□□ -0.88
TSR3YOR006C RTF1P53064 558 aa9.56□□□□□ -0.88
TSR3YOR006C VRP1P37370 817 aa9.55□□□□□ -0.88
TSR3YOR006C STR2P47164 639 aa9.55□□□□□ -0.88
TSR3YOR006C ISM1P48526 1002 aa9.55□□□□□ -0.88
TSR3YOR006C FPK1P53739 893 aa9.55□□□□□ -0.88
TSR3YOR006C YPR015CQ12531 247 aa9.55□□□□□ -0.88
TSR3YOR006C NUP157P40064 1391 aaKnown RBP9.54□□□□□ -0.88
TSR3YOR006C GDB1Q06625 1536 aa9.53□□□□□ -0.88
TSR3YOR006C CSN12P47130 423 aa9.52□□□□□ -0.89
TSR3YOR006C HST2P53686 357 aa9.52□□□□□ -0.89
TSR3YOR006C YNL115CP53925 644 aa9.52□□□□□ -0.89
TSR3YOR006C IQG1Q12280 1495 aa9.52□□□□□ -0.89
TSR3YOR006C IRC20Q06554 1556 aa9.51□□□□□ -0.89
TSR3YOR006C BUD20Q08004 166 aaPredicted RBP9.51□□□□□ -0.89
TSR3YOR006C PRT1P06103 763 aaKnown RBP9.5□□□□□ -0.89
TSR3YOR006C SSA2P10592 639 aaKnown RBP9.5□□□□□ -0.89
TSR3YOR006C GLN1P32288 370 aaKnown RBP9.5□□□□□ -0.89
TSR3YOR006C GCD11P32481 527 aaKnown RBP9.5□□□□□ -0.89
TSR3YOR006C KEX2P13134 814 aa9.49□□□□□ -0.89
TSR3YOR006C SAS4Q04003 481 aa9.49□□□□□ -0.89
TSR3YOR006C TRM3Q07527 1436 aa9.48□□□□□ -0.89
TSR3YOR006C GYP1Q08484 637 aa9.48□□□□□ -0.89
TSR3YOR006C MMP1Q12372 583 aa9.48□□□□□ -0.89
TSR3YOR006C PDR10P51533 1564 aa9.48□□□□□ -0.89
TSR3YOR006C BUD3P25558 1636 aa9.48□□□□□ -0.89
TSR3YOR006C GUA1P38625 525 aaKnown RBP9.47□□□□□ -0.89
TSR3YOR006C GEA1P47102 1408 aaPredicted RBP9.46□□□□□ -0.9
TSR3YOR006C DNF2Q12675 1612 aa9.45□□□□□ -0.9
TSR3YOR006C DOP1Q03921 1698 aa9.45□□□□□ -0.9
TSR3YOR006C SLY41P22215 453 aa9.44□□□□□ -0.9
TSR3YOR006C XDJ1P39102 459 aa9.44□□□□□ -0.9
TSR3YOR006C CAT8P39113 1433 aa9.44□□□□□ -0.9
TSR3YOR006C TY1A-DR4O74302 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-HP0C2I4 478 aaKnown RBP9.43□□□□□ -0.9
TSR3YOR006C TY1A-AP0CX57 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-PR1P0CX58 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-ORP0CX59 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-PR2P0CX60 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-DR5P0CX65 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-ER2P0CX66 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-GR3P0CX67 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-LR1P0CX68 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-MR2P0CX69 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-JR2P47099 440 aa9.43□□□□□ -0.9
TSR3YOR006C HPC2Q01448 625 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-DR1Q03856 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-ML1Q04706 440 aaKnown RBP9.43□□□□□ -0.9
TSR3YOR006C ERF2Q06551 359 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-BRQ12217 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-NL2Q12470 440 aa9.43□□□□□ -0.9
TSR3YOR006C TY1A-GR2Q12485 440 aa9.43□□□□□ -0.9
TSR3YOR006C SEC2P17065 759 aa9.42□□□□□ -0.9
TSR3YOR006C PAT1P25644 796 aaKnown RBP9.42□□□□□ -0.9
TSR3YOR006C HGH1P48362 394 aaKnown RBP9.42□□□□□ -0.9
TSR3YOR006C TYW1Q08960 810 aaKnown RBP9.42□□□□□ -0.9
TSR3YOR006C SCJ1P25303 377 aa9.41□□□□□ -0.9
TSR3YOR006C KTR1P27810 393 aaKnown RBP9.4□□□□□ -0.9
TSR3YOR006C ESS1P22696 170 aa9.39□□□□□ -0.91
TSR3YOR006C SPT16P32558 1035 aaKnown RBP9.39□□□□□ -0.91
TSR3YOR006C MRF1P30775 413 aaPredicted RBP9.38□□□□□ -0.91
TSR3YOR006C BRL1P38770 471 aa9.37□□□□□ -0.91
TSR3YOR006C PKH3Q03306 898 aaPredicted RBP9.37□□□□□ -0.91
TSR3YOR006C RRN7P40992 514 aa9.36□□□□□ -0.91
TSR3YOR006C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.36□□□□□ -0.91not detected
TSR3YOR006C PUS6P53294 404 aa9.36□□□□□ -0.91
TSR3YOR006C TUB4P53378 473 aa9.36□□□□□ -0.91
TSR3YOR006C LAM6Q08001 693 aa9.36□□□□□ -0.91
TSR3YOR006C TY3B-GQ99315 1547 aa9.35□□□□□ -0.91
TSR3YOR006C TBF1Q02457 562 aa9.34□□□□□ -0.91
TSR3YOR006C AGE1Q04412 482 aa9.34□□□□□ -0.91
TSR3YOR006C YBT1P32386 1661 aa9.34□□□□□ -0.91
TSR3YOR006C YJU3P28321 313 aa9.33□□□□□ -0.92
TSR3YOR006C CHC1P22137 1653 aaKnown RBP9.32□□□□□ -0.92
TSR3YOR006C TRM1P15565 570 aaKnown RBP9.32□□□□□ -0.92
TSR3YOR006C ARO1P08566 1588 aaKnown RBP9.32□□□□□ -0.92
TSR3YOR006C ARG8P18544 423 aa9.31□□□□□ -0.92
TSR3YOR006C TFB3Q03290 321 aa9.31□□□□□ -0.92
TSR3YOR006C ERG12P07277 443 aa9.3□□□□□ -0.92
TSR3YOR006C RAD59Q12223 238 aa9.3□□□□□ -0.92
TSR3YOR006C BNR1P40450 1375 aa9.29□□□□□ -0.92
TSR3YOR006C PAC1P39946 494 aaKnown RBP9.29□□□□□ -0.92
TSR3YOR006C YSP2Q06681 1438 aa9.29□□□□□ -0.92
TSR3YOR006C DMA2P53924 522 aa9.28□□□□□ -0.92
TSR3YOR006C YEL077CQ3E7X8 1277 aa9.28□□□□□ -0.92
TSR3YOR006C RSC30P38781 883 aa9.27□□□□□ -0.93
TSR3YOR006C KXD1P53158 218 aa9.27□□□□□ -0.93
TSR3YOR006C RPA14P50106 137 aa9.26□□□□□ -0.93
TSR3YOR006C YDL206WQ12424 762 aa9.26□□□□□ -0.93
TSR3YOR006C SEC7P11075 2009 aaKnown RBP9.26□□□□□ -0.93
TSR3YOR006C ALR1Q08269 859 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 69.8 ms