RNA–Protein interactions for RNA: YNL006W

LST8, Transcript of Protein required for the transport of Gap1p, yeastyeast

Gene LST8, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LST8YNL006W IMH1Q06704 911 aaKnown RBP7.7□□□□□ -1.18
LST8YNL006W SAM3Q08986 587 aa7.7□□□□□ -1.18
LST8YNL006W LEU3P08638 886 aa7.69□□□□□ -1.18
LST8YNL006W RCR1P38212 213 aa7.69□□□□□ -1.18
LST8YNL006W MSB3P48566 633 aaPredicted RBP7.69□□□□□ -1.18
LST8YNL006W BMT6Q12291 365 aa7.69□□□□□ -1.18
LST8YNL006W PRP5P21372 849 aaPredicted RBP7.68□□□□□ -1.18
LST8YNL006W RTG1P32607 177 aa7.67□□□□□ -1.18
LST8YNL006W CHZ1P40019 153 aaPredicted RBP7.67□□□□□ -1.18
LST8YNL006W YMR074CQ04773 145 aa7.67□□□□□ -1.18
LST8YNL006W RPS24AP0CX31 135 aaKnown RBP7.65□□□□□ -1.18
LST8YNL006W RPS24BP0CX32 135 aaKnown RBP7.65□□□□□ -1.18
LST8YNL006W RAM2P29703 316 aa7.64□□□□□ -1.19
LST8YNL006W CSE4P36012 229 aa7.63□□□□□ -1.19
LST8YNL006W YNL035CP53962 389 aaKnown RBP7.62□□□□□ -1.19
LST8YNL006W RIM15P43565 1770 aa7.61□□□□□ -1.19
LST8YNL006W RSF2P46974 1380 aa7.61□□□□□ -1.19
LST8YNL006W LEU2P04173 364 aaPredicted RBP7.61□□□□□ -1.19
LST8YNL006W NCR1Q12200 1170 aa7.61□□□□□ -1.19
LST8YNL006W SNF2P22082 1703 aa7.61□□□□□ -1.19
LST8YNL006W SEC61P32915 480 aa7.6□□□□□ -1.19
LST8YNL006W MTR4P47047 1073 aaKnown RBP7.6□□□□□ -1.19
LST8YNL006W PRP43P53131 767 aaKnown RBP7.6□□□□□ -1.19
LST8YNL006W IES2P40154 320 aa7.59□□□□□ -1.19
LST8YNL006W DOT5P40553 215 aa7.59□□□□□ -1.19
LST8YNL006W SLM3Q12093 417 aa7.59□□□□□ -1.19
LST8YNL006W TCB1Q12466 1186 aa7.58□□□□□ -1.2
LST8YNL006W FOX2Q02207 900 aaKnown RBP7.57□□□□□ -1.2
LST8YNL006W AUS1Q08409 1394 aa7.57□□□□□ -1.2
LST8YNL006W RPN11P43588 306 aaKnown RBP7.56□□□□□ -1.2
LST8YNL006W XKS1P42826 600 aa7.55□□□□□ -1.2
LST8YNL006W GAS4Q08271 471 aa7.55□□□□□ -1.2
LST8YNL006W ROM2P51862 1356 aaKnown RBP7.55□□□□□ -1.2
LST8YNL006W DPS1P04802 557 aaKnown RBP7.54□□□□□ -1.2
LST8YNL006W SET1P38827 1080 aaKnown RBP7.54□□□□□ -1.2
LST8YNL006W DAN4P47179 1161 aa7.54□□□□□ -1.2
LST8YNL006W GYP5Q12344 894 aa7.53□□□□□ -1.2
LST8YNL006W YRF1-4O13559 1382 aa7.53□□□□□ -1.2
LST8YNL006W MHP1P43638 1398 aa7.53□□□□□ -1.2
LST8YNL006W NST1P53935 1240 aa7.52□□□□□ -1.21
LST8YNL006W YKL133CP36066 463 aa7.51□□□□□ -1.21
LST8YNL006W NPR2P39923 615 aa7.51□□□□□ -1.21
LST8YNL006W COBP00163 385 aa7.5□□□□□ -1.21
LST8YNL006W JIP4Q03361 876 aa7.5□□□□□ -1.21
LST8YNL006W HIM1Q06674 414 aa7.5□□□□□ -1.21
LST8YNL006W PDI1P17967 522 aaKnown RBP7.49□□□□□ -1.21
LST8YNL006W YKR075CP36155 307 aa7.49□□□□□ -1.21
LST8YNL006W LYS4P49367 693 aaPredicted RBP7.49□□□□□ -1.21
LST8YNL006W FRK1Q03002 865 aaPredicted RBP7.49□□□□□ -1.21
LST8YNL006W YPR148CQ06523 435 aa7.49□□□□□ -1.21
LST8YNL006W SIR4P11978 1358 aa7.48□□□□□ -1.21
LST8YNL006W ENP1P38333 483 aaKnown RBP7.48□□□□□ -1.21
LST8YNL006W POL5P39985 1022 aaKnown RBP7.48□□□□□ -1.21
LST8YNL006W PDS5Q04264 1277 aa7.48□□□□□ -1.21
LST8YNL006W HTA1P04911 132 aaKnown RBP7.47□□□□□ -1.21
LST8YNL006W HTA2P04912 132 aa7.47□□□□□ -1.21
LST8YNL006W YEF3P16521 1044 aaKnown RBP7.47□□□□□ -1.21
LST8YNL006W DCW1P36091 449 aa7.47□□□□□ -1.21
LST8YNL006W ADE16P54113 591 aaKnown RBP7.47□□□□□ -1.21
LST8YNL006W SEC3P33332 1336 aaKnown RBP7.47□□□□□ -1.21
LST8YNL006W MAK11P20484 414 aaKnown RBP7.46□□□□□ -1.22
LST8YNL006W UBP1P25037 809 aa7.46□□□□□ -1.22
LST8YNL006W YBL086CP38177 466 aa7.46□□□□□ -1.22
LST8YNL006W VPS70P47161 811 aa7.46□□□□□ -1.22
LST8YNL006W RTF1P53064 558 aa7.46□□□□□ -1.22
LST8YNL006W TFG1P41895 735 aaPredicted RBP7.45□□□□□ -1.22
LST8YNL006W SAP30P38429 201 aa7.44□□□□□ -1.22
LST8YNL006W RPN1P38764 993 aaKnown RBP7.44□□□□□ -1.22
LST8YNL006W CTH1P47976 325 aa7.44□□□□□ -1.22
LST8YNL006W TAP42Q04372 366 aa7.44□□□□□ -1.22
LST8YNL006W YDL129WQ07555 291 aa7.44□□□□□ -1.22
LST8YNL006W RPO41P13433 1351 aaKnown RBP7.44□□□□□ -1.22
LST8YNL006W EDE1P34216 1381 aa7.44□□□□□ -1.22
LST8YNL006W TRK1P12685 1235 aa7.43□□□□□ -1.22
LST8YNL006W YEL023CP39992 682 aa7.43□□□□□ -1.22
LST8YNL006W SPB4P25808 606 aaPredicted RBP7.42□□□□□ -1.22
LST8YNL006W SCT1P32784 759 aa7.42□□□□□ -1.22
LST8YNL006W PRP40P33203 583 aaKnown RBP7.42□□□□□ -1.22
LST8YNL006W PTC4P38089 393 aa7.42□□□□□ -1.22
LST8YNL006W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.42□□□□□ -1.22not detected
LST8YNL006W YJL181WP46987 611 aa7.42□□□□□ -1.22
LST8YNL006W LAM6Q08001 693 aa7.42□□□□□ -1.22
LST8YNL006W KAR2P16474 682 aaKnown RBP7.41□□□□□ -1.22
LST8YNL006W GRX4P32642 244 aa7.41□□□□□ -1.22
LST8YNL006W UTP10P42945 1769 aaKnown RBP7.41□□□□□ -1.22
LST8YNL006W INP54Q08227 384 aaKnown RBP7.4□□□□□ -1.22
LST8YNL006W SSA2P10592 639 aaKnown RBP7.39□□□□□ -1.23
LST8YNL006W MEC3Q02574 474 aa7.38□□□□□ -1.23
LST8YNL006W CHL1P22516 861 aaPredicted RBP7.37□□□□□ -1.23
LST8YNL006W EDS1P38073 919 aa7.37□□□□□ -1.23
LST8YNL006W GRE2Q12068 342 aaKnown RBP7.37□□□□□ -1.23
LST8YNL006W OSM1P21375 501 aaKnown RBP7.36□□□□□ -1.23
LST8YNL006W ATG13Q06628 738 aa7.36□□□□□ -1.23
LST8YNL006W NUP145P49687 1317 aa7.35□□□□□ -1.23
LST8YNL006W COQ8P27697 501 aa7.35□□□□□ -1.23
LST8YNL006W UGA2P38067 497 aa7.35□□□□□ -1.23
LST8YNL006W PRE3P38624 215 aa7.35□□□□□ -1.23
LST8YNL006W ALD2P47771 506 aa7.35□□□□□ -1.23
LST8YNL006W DSD1P53095 428 aa7.35□□□□□ -1.23
LST8YNL006W RRP46P53256 223 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms