RNA–Protein interactions for RNA: YMR255W

GFD1, Transcript of Coiled-coiled protein of unknown function, yeastyeast

Gene GFD1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GFD1YMR255W XRN1P22147 1528 aaKnown RBP9.02□□□□□ -0.97
GFD1YMR255W MOD5P07884 428 aa9.02□□□□□ -0.97
GFD1YMR255W MRF1P30775 413 aaPredicted RBP9.02□□□□□ -0.97
GFD1YMR255W RGA1P39083 1007 aa9.02□□□□□ -0.97
GFD1YMR255W NAF1P53919 492 aaKnown RBP9.02□□□□□ -0.97
GFD1YMR255W ISF1P32488 338 aa9.01□□□□□ -0.97
GFD1YMR255W FIG4P42837 879 aa9.01□□□□□ -0.97
GFD1YMR255W MCM16Q12262 181 aa9.01□□□□□ -0.97
GFD1YMR255W RRD1P40454 393 aaKnown RBP9□□□□□ -0.97
GFD1YMR255W ENO1P00924 437 aaKnown RBP8.99□□□□□ -0.97
GFD1YMR255W RAS1P01119 309 aa8.98□□□□□ -0.97
GFD1YMR255W TEC1P18412 486 aa8.98□□□□□ -0.97
GFD1YMR255W RIM21P48565 533 aa8.98□□□□□ -0.97
GFD1YMR255W FRK1Q03002 865 aaPredicted RBP8.98□□□□□ -0.97
GFD1YMR255W CST6P40535 587 aa8.97□□□□□ -0.97
GFD1YMR255W EMP47P43555 445 aa8.97□□□□□ -0.97
GFD1YMR255W BDP1P46678 594 aa8.97□□□□□ -0.97
GFD1YMR255W PUS5Q06244 254 aa8.97□□□□□ -0.97
GFD1YMR255W CPS1P27614 576 aa8.96□□□□□ -0.98
GFD1YMR255W TPD3P31383 635 aa8.96□□□□□ -0.98
GFD1YMR255W ITT1Q04638 464 aa8.96□□□□□ -0.98
GFD1YMR255W MRX10Q05648 414 aa8.96□□□□□ -0.98
GFD1YMR255W VAC17P25591 423 aa8.94□□□□□ -0.98
GFD1YMR255W TTI1P36097 1038 aa8.94□□□□□ -0.98
GFD1YMR255W GUT2P32191 649 aa8.93□□□□□ -0.98
GFD1YMR255W YPP1P46951 817 aa8.93□□□□□ -0.98
GFD1YMR255W YPR084WQ06821 456 aa8.93□□□□□ -0.98
GFD1YMR255W STE20Q03497 939 aaKnown RBP8.92□□□□□ -0.98
GFD1YMR255W YEL077CQ3E7X8 1277 aa8.92□□□□□ -0.98
GFD1YMR255W REV3P14284 1504 aa8.9□□□□□ -0.98
GFD1YMR255W RDS2P19541 446 aaKnown RBP8.9□□□□□ -0.98
GFD1YMR255W KIP2P28743 706 aa8.9□□□□□ -0.98
GFD1YMR255W FRA1Q07825 749 aa8.9□□□□□ -0.98
GFD1YMR255W SUB2Q07478 446 aaKnown RBP8.89□□□□□ -0.99
GFD1YMR255W SSA4P22202 642 aaKnown RBP8.88□□□□□ -0.99
GFD1YMR255W IXR1P33417 597 aa8.88□□□□□ -0.99
GFD1YMR255W ENV9Q08651 330 aa8.88□□□□□ -0.99
GFD1YMR255W SIN3P22579 1536 aa8.87□□□□□ -0.99
GFD1YMR255W AMS1P22855 1083 aa8.86□□□□□ -0.99
GFD1YMR255W KTR7P40504 517 aa8.86□□□□□ -0.99
GFD1YMR255W SYH1Q02875 849 aaKnown RBP8.85□□□□□ -0.99
GFD1YMR255W THO2P53552 1597 aaKnown RBP8.83□□□□□ -1
GFD1YMR255W PEP12P32854 288 aa8.83□□□□□ -1
GFD1YMR255W APP1P53933 587 aa8.83□□□□□ -1
GFD1YMR255W SOH1P38633 127 aa8.82□□□□□ -1
GFD1YMR255W MRX12P47084 519 aa8.82□□□□□ -1
GFD1YMR255W SSK2P53599 1579 aa8.82□□□□□ -1
GFD1YMR255W CLA4P48562 842 aa8.81□□□□□ -1
GFD1YMR255W SIS2P36024 562 aa8.8□□□□□ -1
GFD1YMR255W TGL4P36165 910 aa8.8□□□□□ -1
GFD1YMR255W APL6P46682 809 aa8.8□□□□□ -1
GFD1YMR255W NOB1Q08444 459 aaKnown RBP8.8□□□□□ -1
GFD1YMR255W TRK1P12685 1235 aa8.79□□□□□ -1
GFD1YMR255W PUP1P25043 261 aa8.79□□□□□ -1
GFD1YMR255W ATG3P40344 310 aa8.79□□□□□ -1
GFD1YMR255W DNA2P38859 1522 aa8.79□□□□□ -1
GFD1YMR255W YML083CQ04526 418 aa8.78□□□□□ -1
GFD1YMR255W TAF2P23255 1407 aa8.78□□□□□ -1
GFD1YMR255W ISR1Q06098 443 aaKnown RBP8.77□□□□□ -1.01
GFD1YMR255W SSA1P10591 642 aaKnown RBP8.76□□□□□ -1.01
GFD1YMR255W ECM23Q02710 187 aa8.76□□□□□ -1.01
GFD1YMR255W ATG20Q07528 640 aa8.76□□□□□ -1.01
GFD1YMR255W KOG1P38873 1557 aa8.76□□□□□ -1.01
GFD1YMR255W HAL5P38970 855 aaKnown RBP8.75□□□□□ -1.01
GFD1YMR255W EMW1P42842 904 aaKnown RBP8.75□□□□□ -1.01
GFD1YMR255W HED1Q03937 162 aa8.75□□□□□ -1.01
GFD1YMR255W AIR1P40507 360 aaKnown RBP8.73□□□□□ -1.01
GFD1YMR255W UTP13Q05946 817 aaKnown RBP8.73□□□□□ -1.01
GFD1YMR255W ESP1Q03018 1630 aa8.72□□□□□ -1.01
GFD1YMR255W MET32Q12041 191 aa8.71□□□□□ -1.02
GFD1YMR255W BUD4P47136 1447 aa8.71□□□□□ -1.02
GFD1YMR255W GAL2P13181 574 aa8.7□□□□□ -1.02
GFD1YMR255W MIP1P15801 1254 aa8.7□□□□□ -1.02
GFD1YMR255W MRT4P33201 236 aaKnown RBP8.7□□□□□ -1.02
GFD1YMR255W GEF1P37020 779 aa8.7□□□□□ -1.02
GFD1YMR255W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
GFD1YMR255W MKS1P34072 584 aa8.69□□□□□ -1.02
GFD1YMR255W PDI1P17967 522 aaKnown RBP8.68□□□□□ -1.02
GFD1YMR255W UBX7P38349 436 aa8.68□□□□□ -1.02
GFD1YMR255W HDA3Q06623 655 aa8.68□□□□□ -1.02
GFD1YMR255W MYO2P19524 1574 aaKnown RBP8.68□□□□□ -1.02
GFD1YMR255W ACS2P52910 683 aaKnown RBP8.67□□□□□ -1.02
GFD1YMR255W RPL34AP87262 121 aaPredicted RBP8.67□□□□□ -1.02
GFD1YMR255W ECM5Q03214 1411 aa8.67□□□□□ -1.02
GFD1YMR255W PHO87P25360 923 aa8.66□□□□□ -1.02
GFD1YMR255W FBP26P32604 452 aa8.66□□□□□ -1.02
GFD1YMR255W ISU1Q03020 165 aa8.66□□□□□ -1.02
GFD1YMR255W DFG5Q05031 458 aa8.66□□□□□ -1.02
GFD1YMR255W ATG2P53855 1592 aa8.65□□□□□ -1.02
GFD1YMR255W YBL086CP38177 466 aa8.65□□□□□ -1.02
GFD1YMR255W CHD1P32657 1468 aa8.64□□□□□ -1.03
GFD1YMR255W CDC4P07834 779 aa8.64□□□□□ -1.03
GFD1YMR255W TSC13Q99190 310 aa8.64□□□□□ -1.03
GFD1YMR255W AIM9P40053 627 aaKnown RBP8.63□□□□□ -1.03
GFD1YMR255W HAP4P14064 554 aa8.62□□□□□ -1.03
GFD1YMR255W UTR2P32623 467 aa8.62□□□□□ -1.03
GFD1YMR255W ASH1P34233 588 aa8.62□□□□□ -1.03
GFD1YMR255W SKI3P17883 1432 aaKnown RBP8.62□□□□□ -1.03
GFD1YMR255W DAT1P13483 248 aaKnown RBP8.61□□□□□ -1.03
GFD1YMR255W ROM1P53046 1155 aa8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms