RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C DPH5P32469 300 aaPredicted RBP8.49□□□□□ -1.05
NDE1YMR145C RTT107P38850 1070 aa8.49□□□□□ -1.05
NDE1YMR145C CEF1Q03654 590 aaPredicted RBP8.49□□□□□ -1.05
NDE1YMR145C LSO1Q3E827 93 aa8.49□□□□□ -1.05
NDE1YMR145C NUP170P38181 1502 aa8.48□□□□□ -1.05
NDE1YMR145C EFB1P32471 206 aaKnown RBP8.48□□□□□ -1.05
NDE1YMR145C RPG1P38249 964 aaKnown RBP8.48□□□□□ -1.05
NDE1YMR145C BEM4P39011 633 aa8.48□□□□□ -1.05
NDE1YMR145C MPH1P40562 993 aa8.48□□□□□ -1.05
NDE1YMR145C LCD1Q04377 747 aa8.48□□□□□ -1.05
NDE1YMR145C PDI1P17967 522 aaKnown RBP8.46□□□□□ -1.05
NDE1YMR145C EXO84P38261 753 aa8.46□□□□□ -1.05
NDE1YMR145C TOM71P38825 639 aaKnown RBP8.46□□□□□ -1.05
NDE1YMR145C TAF1P46677 1066 aa8.46□□□□□ -1.05
NDE1YMR145C HUL5P53119 910 aa8.46□□□□□ -1.05
NDE1YMR145C RTS3P53289 263 aa8.46□□□□□ -1.05
NDE1YMR145C HST2P53686 357 aa8.46□□□□□ -1.05
NDE1YMR145C YNL247WP53852 767 aaKnown RBP8.46□□□□□ -1.05
NDE1YMR145C YLR257WQ06146 321 aaKnown RBP8.46□□□□□ -1.06
NDE1YMR145C SFI1Q12369 946 aa8.46□□□□□ -1.06
NDE1YMR145C YPR172WQ06608 200 aa8.45□□□□□ -1.06
NDE1YMR145C NKP1Q12493 238 aa8.45□□□□□ -1.06
NDE1YMR145C SSA4P22202 642 aaKnown RBP8.44□□□□□ -1.06
NDE1YMR145C SEC14P24280 304 aaKnown RBP8.44□□□□□ -1.06
NDE1YMR145C SEC26P41810 973 aaKnown RBP8.44□□□□□ -1.06
NDE1YMR145C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
NDE1YMR145C ATG26Q06321 1198 aa8.44□□□□□ -1.06
NDE1YMR145C TIF3P34167 436 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C SAP1P39955 897 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C RRP9Q06506 573 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C UTP4Q06679 776 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C RIX7Q07844 837 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C BUD21Q08492 214 aaPredicted RBP8.43□□□□□ -1.06
NDE1YMR145C NUP145P49687 1317 aa8.43□□□□□ -1.06
NDE1YMR145C CDC3P32457 520 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C RKM3P38222 552 aa8.43□□□□□ -1.06
NDE1YMR145C INP52P50942 1183 aa8.43□□□□□ -1.06
NDE1YMR145C SHE4P51534 789 aa8.43□□□□□ -1.06
NDE1YMR145C YNL035CP53962 389 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C MEH1Q02205 184 aa8.43□□□□□ -1.06
NDE1YMR145C ARO80Q04052 950 aa8.43□□□□□ -1.06
NDE1YMR145C HEL2Q05580 639 aaKnown RBP8.43□□□□□ -1.06
NDE1YMR145C PSK2Q08217 1101 aa8.43□□□□□ -1.06
NDE1YMR145C SIN3P22579 1536 aa8.43□□□□□ -1.06
NDE1YMR145C MCM2P29469 868 aa8.42□□□□□ -1.06
NDE1YMR145C SSP1P38871 571 aa8.42□□□□□ -1.06
NDE1YMR145C CEP3P40969 608 aa8.42□□□□□ -1.06
NDE1YMR145C ADE12P80210 433 aaKnown RBP8.42□□□□□ -1.06
NDE1YMR145C YEF3P16521 1044 aaKnown RBP8.41□□□□□ -1.06
NDE1YMR145C MSH1P25846 959 aa8.41□□□□□ -1.06
NDE1YMR145C SEC6P32844 805 aa8.41□□□□□ -1.06
NDE1YMR145C PET100P38958 111 aa8.41□□□□□ -1.06
NDE1YMR145C VPS41P38959 992 aa8.41□□□□□ -1.06
NDE1YMR145C STU2P46675 888 aa8.41□□□□□ -1.06
NDE1YMR145C TY4A-JP47023 414 aa8.41□□□□□ -1.06
NDE1YMR145C ALD2P47771 506 aa8.41□□□□□ -1.06
NDE1YMR145C IST1P53843 298 aaPredicted RBP8.41□□□□□ -1.06
NDE1YMR145C GDE1Q02979 1223 aa8.41□□□□□ -1.06
NDE1YMR145C YML119WQ03208 357 aa8.41□□□□□ -1.06
NDE1YMR145C UBX2Q04228 584 aa8.41□□□□□ -1.06
NDE1YMR145C TSC11P40061 1430 aa8.4□□□□□ -1.06
NDE1YMR145C ELM1P32801 640 aa8.4□□□□□ -1.06
NDE1YMR145C KDX1P36005 433 aa8.4□□□□□ -1.06
NDE1YMR145C AIM21P40563 679 aa8.4□□□□□ -1.06
NDE1YMR145C YRB1P41920 201 aaKnown RBP8.4□□□□□ -1.06
NDE1YMR145C HOS2P53096 452 aaPredicted RBP8.4□□□□□ -1.06
NDE1YMR145C VTC3Q02725 835 aa8.4□□□□□ -1.06
NDE1YMR145C YDR338CQ05497 695 aa8.4□□□□□ -1.06
NDE1YMR145C LAM6Q08001 693 aa8.4□□□□□ -1.06
NDE1YMR145C SLX4Q12098 748 aa8.4□□□□□ -1.06
NDE1YMR145C APC2Q12440 853 aa8.4□□□□□ -1.06
NDE1YMR145C GEA1P47102 1408 aaPredicted RBP8.4□□□□□ -1.07
NDE1YMR145C BTN2P53286 410 aa8.4□□□□□ -1.07
NDE1YMR145C BRE1Q07457 700 aaKnown RBP8.4□□□□□ -1.07
NDE1YMR145C MHP1P43638 1398 aa8.39□□□□□ -1.07
NDE1YMR145C GDT1P38301 280 aaPredicted RBP8.39□□□□□ -1.07
NDE1YMR145C SUM1P46676 1062 aa8.39□□□□□ -1.07
NDE1YMR145C GYP7P48365 746 aa8.39□□□□□ -1.07
NDE1YMR145C RIA1P53893 1110 aa8.39□□□□□ -1.07
NDE1YMR145C SPO19Q03029 223 aa8.39□□□□□ -1.07
NDE1YMR145C DNA2P38859 1522 aa8.39□□□□□ -1.07
NDE1YMR145C RPL17AP05740 184 aaKnown RBP8.38□□□□□ -1.07
NDE1YMR145C MAK11P20484 414 aaKnown RBP8.38□□□□□ -1.07
NDE1YMR145C UBP1P25037 809 aa8.38□□□□□ -1.07
NDE1YMR145C ERC1P38767 581 aa8.38□□□□□ -1.07
NDE1YMR145C BNI5P53890 448 aaKnown RBP8.38□□□□□ -1.07
NDE1YMR145C ARP5P53946 755 aa8.38□□□□□ -1.07
NDE1YMR145C TIM11P81449 96 aaPredicted RBP8.38□□□□□ -1.07
NDE1YMR145C VMS1Q04311 632 aaKnown RBP8.38□□□□□ -1.07
NDE1YMR145C BRR1Q99177 341 aaPredicted RBP8.38□□□□□ -1.07
NDE1YMR145C IES2P40154 320 aa8.37□□□□□ -1.07
NDE1YMR145C BNI4P53858 892 aa8.37□□□□□ -1.07
NDE1YMR145C MRD1Q06106 887 aaKnown RBP8.37□□□□□ -1.07
NDE1YMR145C CDC45Q08032 650 aa8.37□□□□□ -1.07
NDE1YMR145C RTC1Q08281 1341 aa8.37□□□□□ -1.07
NDE1YMR145C MYO2P19524 1574 aaKnown RBP8.37□□□□□ -1.07
NDE1YMR145C STE20Q03497 939 aaKnown RBP8.37□□□□□ -1.07
NDE1YMR145C HSL1P34244 1518 aa8.36□□□□□ -1.07
NDE1YMR145C FAR1P21268 830 aa8.36□□□□□ -1.07
NDE1YMR145C SHC1P39000 512 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms