RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	KIP2	P28743	706 aa		5.34	□□□□□ -1.55
PKR1	YMR123W	NAF1	P53919	492 aa	Known RBP	5.34	□□□□□ -1.55
PKR1	YMR123W	AFT1	P22149	690 aa		5.33	□□□□□ -1.56
PKR1	YMR123W	SPT5	P27692	1063 aa	Known RBP	5.33	□□□□□ -1.56
PKR1	YMR123W	YBL036C	P38197	257 aa		5.33	□□□□□ -1.56
PKR1	YMR123W	FIG4	P42837	879 aa		5.33	□□□□□ -1.56
PKR1	YMR123W	TEC1	P18412	486 aa		5.32	□□□□□ -1.56
PKR1	YMR123W	PKC1	P24583	1151 aa		5.32	□□□□□ -1.56
PKR1	YMR123W	MRT4	P33201	236 aa	Known RBP	5.32	□□□□□ -1.56
PKR1	YMR123W	HGH1	P48362	394 aa	Known RBP	5.32	□□□□□ -1.56
PKR1	YMR123W	ASH1	P34233	588 aa		5.31	□□□□□ -1.56
PKR1	YMR123W	HST3	P53687	447 aa		5.3	□□□□□ -1.56
PKR1	YMR123W	YPR084W	Q06821	456 aa		5.3	□□□□□ -1.56
PKR1	YMR123W	GUT2	P32191	649 aa		5.29	□□□□□ -1.56
PKR1	YMR123W	RTT106	P40161	455 aa		5.29	□□□□□ -1.56
PKR1	YMR123W	MSB3	P48566	633 aa	Predicted RBP	5.29	□□□□□ -1.56
PKR1	YMR123W	EMW1	P42842	904 aa	Known RBP	5.28	□□□□□ -1.56
PKR1	YMR123W	LCB5	Q06147	687 aa	Known RBP	5.28	□□□□□ -1.56
PKR1	YMR123W	BIO2	P32451	375 aa		5.27	□□□□□ -1.57
PKR1	YMR123W	FRA1	Q07825	749 aa		5.26	□□□□□ -1.57
PKR1	YMR123W	SUP45	P12385	437 aa	Known RBP	5.25	□□□□□ -1.57
PKR1	YMR123W	YBL086C	P38177	466 aa		5.25	□□□□□ -1.57
PKR1	YMR123W	STE20	Q03497	939 aa	Known RBP	5.25	□□□□□ -1.57
PKR1	YMR123W	MCM16	Q12262	181 aa		5.25	□□□□□ -1.57
PKR1	YMR123W	UGA3	P26370	528 aa		5.24	□□□□□ -1.57
PKR1	YMR123W	MRX12	P47084	519 aa		5.24	□□□□□ -1.57
PKR1	YMR123W	ITT1	Q04638	464 aa		5.24	□□□□□ -1.57
PKR1	YMR123W	YDJ1	P25491	409 aa	Known RBP	5.23	□□□□□ -1.57
PKR1	YMR123W	YPP1	P46951	817 aa		5.23	□□□□□ -1.57
PKR1	YMR123W	YJL007C	P47080	104 aa		5.23	□□□□□ -1.57
PKR1	YMR123W	YJR115W	P47152	169 aa		5.23	□□□□□ -1.57
PKR1	YMR123W	APP1	P53933	587 aa		5.23	□□□□□ -1.57
PKR1	YMR123W	APL6	P46682	809 aa		5.22	□□□□□ -1.57
PKR1	YMR123W	DMA2	P53924	522 aa		5.22	□□□□□ -1.57
PKR1	YMR123W	MTC5	Q03897	1148 aa		5.22	□□□□□ -1.57
PKR1	YMR123W	MKS1	P34072	584 aa		5.21	□□□□□ -1.58
PKR1	YMR123W	EMP47	P43555	445 aa		5.21	□□□□□ -1.58
PKR1	YMR123W	YNL108C	P53929	270 aa		5.21	□□□□□ -1.58
PKR1	YMR123W	ENO2	P00925	437 aa	Known RBP	5.2	□□□□□ -1.58
PKR1	YMR123W	BIM1	P40013	344 aa		5.2	□□□□□ -1.58
PKR1	YMR123W	ATG32	P40458	529 aa		5.2	□□□□□ -1.58
PKR1	YMR123W	PTK2	P47116	818 aa	Known RBP	5.2	□□□□□ -1.58
PKR1	YMR123W	ISF1	P32488	338 aa		5.19	□□□□□ -1.58
PKR1	YMR123W	FBP26	P32604	452 aa		5.19	□□□□□ -1.58
PKR1	YMR123W	RIM21	P48565	533 aa		5.19	□□□□□ -1.58
PKR1	YMR123W	ARG82	P07250	355 aa		5.18	□□□□□ -1.58
PKR1	YMR123W	ATG3	P40344	310 aa		5.18	□□□□□ -1.58
PKR1	YMR123W	NUP85	P46673	744 aa		5.18	□□□□□ -1.58
PKR1	YMR123W	UTP13	Q05946	817 aa	Known RBP	5.18	□□□□□ -1.58
PKR1	YMR123W	ATG20	Q07528	640 aa		5.18	□□□□□ -1.58
PKR1	YMR123W	SRF1	Q12516	437 aa		5.18	□□□□□ -1.58
PKR1	YMR123W	TIF1	P10081	395 aa	Known RBP	5.17	□□□□□ -1.58
PKR1	YMR123W	STE6	P12866	1290 aa		5.17	□□□□□ -1.58
PKR1	YMR123W	RPL34B	P40525	121 aa	Known RBP	5.17	□□□□□ -1.58
PKR1	YMR123W	AAD14	P42884	376 aa		5.17	□□□□□ -1.58
PKR1	YMR123W	ISU1	Q03020	165 aa		5.17	□□□□□ -1.58
PKR1	YMR123W	DFG5	Q05031	458 aa		5.17	□□□□□ -1.58
PKR1	YMR123W	CAF120	P53836	1060 aa		5.16	□□□□□ -1.58
PKR1	YMR123W	MRX10	Q05648	414 aa		5.15	□□□□□ -1.59
PKR1	YMR123W	ISR1	Q06098	443 aa	Known RBP	5.15	□□□□□ -1.59
PKR1	YMR123W	BDS1	Q08347	646 aa		5.15	□□□□□ -1.59
PKR1	YMR123W	RPP2B	P02400	110 aa	Known RBP	5.13	□□□□□ -1.59
PKR1	YMR123W	SPT2	P06843	333 aa	Predicted RBP	5.13	□□□□□ -1.59
PKR1	YMR123W	RDS2	P19541	446 aa	Known RBP	5.13	□□□□□ -1.59
PKR1	YMR123W	RTG2	P32608	588 aa	Known RBP	5.13	□□□□□ -1.59
PKR1	YMR123W	SOH1	P38633	127 aa		5.13	□□□□□ -1.59
PKR1	YMR123W	YLR346C	Q06139	101 aa		5.13	□□□□□ -1.59
PKR1	YMR123W	ENO1	P00924	437 aa	Known RBP	5.12	□□□□□ -1.59
PKR1	YMR123W	GLY1	P37303	387 aa	Known RBP	5.12	□□□□□ -1.59
PKR1	YMR123W	HAL5	P38970	855 aa	Known RBP	5.12	□□□□□ -1.59
PKR1	YMR123W	LSC2	P53312	427 aa		5.12	□□□□□ -1.59
PKR1	YMR123W	OPT2	Q06593	877 aa		5.12	□□□□□ -1.59
PKR1	YMR123W	YJR098C	P47139	656 aa		5.11	□□□□□ -1.59
PKR1	YMR123W	MIP1	P15801	1254 aa		5.1	□□□□□ -1.59
PKR1	YMR123W	UTR2	P32623	467 aa		5.1	□□□□□ -1.59
PKR1	YMR123W	YPR204W	Q08995	1032 aa		5.1	□□□□□ -1.59
PKR1	YMR123W	PEP12	P32854	288 aa		5.09	□□□□□ -1.59
PKR1	YMR123W	DLD1	P32891	587 aa		5.09	□□□□□ -1.59
PKR1	YMR123W	SIS2	P36024	562 aa		5.09	□□□□□ -1.59
PKR1	YMR123W	WTM2	Q12206	467 aa		5.09	□□□□□ -1.59
PKR1	YMR123W	DLD3	P39976	496 aa	Known RBP	5.08	□□□□□ -1.6
PKR1	YMR123W	UBP2	Q01476	1272 aa		5.08	□□□□□ -1.6
PKR1	YMR123W	HDA3	Q06623	655 aa		5.08	□□□□□ -1.6
PKR1	YMR123W	TRK2	P28584	889 aa		5.07	□□□□□ -1.6
PKR1	YMR123W	TBS1	P38114	1094 aa		5.07	□□□□□ -1.6
PKR1	YMR123W	VTC4	P47075	721 aa		5.07	□□□□□ -1.6
PKR1	YMR123W	SCW11	P53189	542 aa		5.07	□□□□□ -1.6
PKR1	YMR123W	TY1A-BL	Q12266	440 aa		5.07	□□□□□ -1.6
PKR1	YMR123W	TCB1	Q12466	1186 aa		5.07	□□□□□ -1.6
PKR1	YMR123W	DAT1	P13483	248 aa	Known RBP	5.06	□□□□□ -1.6
PKR1	YMR123W	ACO2	P39533	789 aa		5.06	□□□□□ -1.6
PKR1	YMR123W	SLX8	P40072	274 aa		5.06	□□□□□ -1.6
PKR1	YMR123W	YFL034W	P43564	1073 aa		5.06	□□□□□ -1.6
PKR1	YMR123W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
PKR1	YMR123W	TTI1	P36097	1038 aa		5.04	□□□□□ -1.6
PKR1	YMR123W	AIM9	P40053	627 aa	Known RBP	5.04	□□□□□ -1.6
PKR1	YMR123W	MSN5	P52918	1224 aa		5.04	□□□□□ -1.6
PKR1	YMR123W	YGR035C	P53222	116 aa		5.04	□□□□□ -1.6
PKR1	YMR123W	DAL1	P32375	460 aa		5.03	□□□□□ -1.6
PKR1	YMR123W	OSH7	P38755	437 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 82.2 ms