RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C ACF4P47129 309 aa1.84□□□□□ -2.11
NUP188YML103C RAM1P22007 431 aa1.84□□□□□ -2.12
NUP188YML103C PTC2P39966 464 aaKnown RBP1.84□□□□□ -2.12
NUP188YML103C YML082WQ04533 649 aaKnown RBP1.84□□□□□ -2.12
NUP188YML103C YEL077CQ3E7X8 1277 aa1.84□□□□□ -2.12
NUP188YML103C MCM1P11746 286 aa1.83□□□□□ -2.12
NUP188YML103C SPT16P32558 1035 aaKnown RBP1.83□□□□□ -2.12
NUP188YML103C FPR4Q06205 392 aaPredicted RBP1.83□□□□□ -2.12
NUP188YML103C MSC6Q08818 692 aaKnown RBP1.83□□□□□ -2.12
NUP188YML103C TSC13Q99190 310 aa1.83□□□□□ -2.12
NUP188YML103C PRT1P06103 763 aaKnown RBP1.83□□□□□ -2.12
NUP188YML103C MGE1P38523 228 aa1.83□□□□□ -2.12
NUP188YML103C APL6P46682 809 aa1.83□□□□□ -2.12
NUP188YML103C ELP4Q02884 456 aaKnown RBP1.83□□□□□ -2.12
NUP188YML103C YDL206WQ12424 762 aa1.83□□□□□ -2.12
NUP188YML103C KEX2P13134 814 aa1.82□□□□□ -2.12
NUP188YML103C GCD11P32481 527 aaKnown RBP1.82□□□□□ -2.12
NUP188YML103C TBS1P38114 1094 aa1.82□□□□□ -2.12
NUP188YML103C SEN54Q02825 467 aaPredicted RBP1.82□□□□□ -2.12
NUP188YML103C KAR5Q04746 504 aa1.82□□□□□ -2.12
NUP188YML103C HAT1Q12341 374 aa1.82□□□□□ -2.12
NUP188YML103C MET10P39692 1035 aa1.82□□□□□ -2.12
NUP188YML103C RRD1P40454 393 aaKnown RBP1.82□□□□□ -2.12
NUP188YML103C EMP47P43555 445 aa1.82□□□□□ -2.12
NUP188YML103C UFD2P54860 961 aa1.82□□□□□ -2.12
NUP188YML103C CWC15Q03772 175 aaKnown RBP1.82□□□□□ -2.12
NUP188YML103C RPP1AP05318 106 aaPredicted RBP1.82□□□□□ -2.12
NUP188YML103C FIG4P42837 879 aa1.82□□□□□ -2.12
NUP188YML103C NNF1P47149 201 aa1.82□□□□□ -2.12
NUP188YML103C FUR4P05316 633 aaKnown RBP1.82□□□□□ -2.12
NUP188YML103C PDC1P06169 563 aaKnown RBP1.82□□□□□ -2.12
NUP188YML103C VAC17P25591 423 aa1.82□□□□□ -2.12
NUP188YML103C FKH1P40466 484 aa1.82□□□□□ -2.12
NUP188YML103C HXT10P43581 546 aa1.82□□□□□ -2.12
NUP188YML103C YML083CQ04526 418 aa1.82□□□□□ -2.12
NUP188YML103C LDB19Q12502 818 aa1.82□□□□□ -2.12
NUP188YML103C GCD6P32501 712 aaKnown RBP1.81□□□□□ -2.12
NUP188YML103C LSO1Q3E827 93 aa1.81□□□□□ -2.12
NUP188YML103C YDJ1P25491 409 aaKnown RBP1.81□□□□□ -2.12
NUP188YML103C UBX7P38349 436 aa1.81□□□□□ -2.12
NUP188YML103C YJL049WP47048 450 aa1.81□□□□□ -2.12
NUP188YML103C YBL113CQ7M4S9 792 aa1.81□□□□□ -2.12
NUP188YML103C SCD5P34758 872 aa1.81□□□□□ -2.12
NUP188YML103C SOH1P38633 127 aa1.81□□□□□ -2.12
NUP188YML103C TUB4P53378 473 aa1.81□□□□□ -2.12
NUP188YML103C ORC1P54784 914 aaPredicted RBP1.81□□□□□ -2.12
NUP188YML103C PDR1P12383 1068 aa1.81□□□□□ -2.12
NUP188YML103C RDS2P19541 446 aaKnown RBP1.81□□□□□ -2.12
NUP188YML103C ISM1P48526 1002 aa1.81□□□□□ -2.12
NUP188YML103C ECM23Q02710 187 aa1.81□□□□□ -2.12
NUP188YML103C CLN2P20438 545 aa1.8□□□□□ -2.12
NUP188YML103C SMC1P32908 1225 aa1.8□□□□□ -2.12
NUP188YML103C PAM1P37304 830 aaKnown RBP1.8□□□□□ -2.12
NUP188YML103C UTP4Q06679 776 aaKnown RBP1.8□□□□□ -2.12
NUP188YML103C YPR084WQ06821 456 aa1.8□□□□□ -2.12
NUP188YML103C PUN1Q06991 263 aa1.8□□□□□ -2.12
NUP188YML103C CYT1P07143 309 aa1.8□□□□□ -2.12
NUP188YML103C CHL1P22516 861 aaPredicted RBP1.8□□□□□ -2.12
NUP188YML103C UTR2P32623 467 aa1.8□□□□□ -2.12
NUP188YML103C PRE3P38624 215 aa1.8□□□□□ -2.12
NUP188YML103C STR2P47164 639 aa1.8□□□□□ -2.12
NUP188YML103C SYH1Q02875 849 aaKnown RBP1.8□□□□□ -2.12
NUP188YML103C AGE1Q04412 482 aa1.8□□□□□ -2.12
NUP188YML103C PNP1Q05788 311 aa1.8□□□□□ -2.12
NUP188YML103C VPS35P34110 944 aa1.8□□□□□ -2.12
NUP188YML103C CIC1P38779 376 aaKnown RBP1.8□□□□□ -2.12
NUP188YML103C OSW7P43611 510 aa1.8□□□□□ -2.12
NUP188YML103C SAM37P50110 327 aa1.8□□□□□ -2.12
NUP188YML103C IXR1P33417 597 aa1.8□□□□□ -2.12
NUP188YML103C AIM9P40053 627 aaKnown RBP1.8□□□□□ -2.12
NUP188YML103C DOS2P54858 310 aa1.8□□□□□ -2.12
NUP188YML103C YTA7P40340 1379 aa1.79□□□□□ -2.12
NUP188YML103C MNR2P35724 969 aa1.79□□□□□ -2.12
NUP188YML103C ERP5P38819 212 aa1.79□□□□□ -2.12
NUP188YML103C DLD3P39976 496 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C ATG20Q07528 640 aa1.79□□□□□ -2.12
NUP188YML103C BUD20Q08004 166 aaPredicted RBP1.79□□□□□ -2.12
NUP188YML103C KAR2P16474 682 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C NGR1P32831 672 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C EMW1P42842 904 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C GYP1Q08484 637 aa1.79□□□□□ -2.12
NUP188YML103C BMT6Q12291 365 aa1.79□□□□□ -2.12
NUP188YML103C TAF13P11747 167 aa1.79□□□□□ -2.12
NUP188YML103C ACS2P52910 683 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C ESF1Q06344 628 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C KIP2P28743 706 aa1.79□□□□□ -2.12
NUP188YML103C MKS1P34072 584 aa1.79□□□□□ -2.12
NUP188YML103C GRS1P38088 690 aaKnown RBP1.79□□□□□ -2.12
NUP188YML103C RRN7P40992 514 aa1.79□□□□□ -2.12
NUP188YML103C OXR1Q08952 273 aa1.79□□□□□ -2.12
NUP188YML103C TY1A-DR4O74302 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-HP0C2I4 478 aaKnown RBP1.78□□□□□ -2.12
NUP188YML103C TY1A-AP0CX57 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-PR1P0CX58 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-ORP0CX59 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-PR2P0CX60 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-DR5P0CX65 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-ER2P0CX66 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-GR3P0CX67 440 aa1.78□□□□□ -2.12
NUP188YML103C TY1A-LR1P0CX68 440 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms