RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeastyeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD8YLR353W YRF1-2P40105 1681 aa7.15□□□□□ -1.26
BUD8YLR353W NUP157P40064 1391 aaKnown RBP7.15□□□□□ -1.26
BUD8YLR353W SLI15P38283 698 aa7.15□□□□□ -1.27
BUD8YLR353W DAN4P47179 1161 aa7.15□□□□□ -1.27
BUD8YLR353W YBL036CP38197 257 aa7.13□□□□□ -1.27
BUD8YLR353W FPK1P53739 893 aa7.13□□□□□ -1.27
BUD8YLR353W VMR1P38735 1592 aa7.13□□□□□ -1.27
BUD8YLR353W YEL023CP39992 682 aa7.13□□□□□ -1.27
BUD8YLR353W RPL34BP40525 121 aaKnown RBP7.13□□□□□ -1.27
BUD8YLR353W GEF1P37020 779 aa7.12□□□□□ -1.27
BUD8YLR353W YPR109WQ06104 294 aa7.12□□□□□ -1.27
BUD8YLR353W TFB4Q12004 338 aa7.11□□□□□ -1.27
BUD8YLR353W TIF1P10081 395 aaKnown RBP7.11□□□□□ -1.27
BUD8YLR353W MMP1Q12372 583 aa7.11□□□□□ -1.27
BUD8YLR353W SSA4P22202 642 aaKnown RBP7.1□□□□□ -1.27
BUD8YLR353W YBL086CP38177 466 aa7.1□□□□□ -1.27
BUD8YLR353W BIO2P32451 375 aa7.09□□□□□ -1.27
BUD8YLR353W CSE4P36012 229 aa7.09□□□□□ -1.27
BUD8YLR353W RAD59Q12223 238 aa7.09□□□□□ -1.27
BUD8YLR353W SIT4P20604 311 aa7.08□□□□□ -1.28
BUD8YLR353W EAP1P36041 632 aaKnown RBP7.08□□□□□ -1.28
BUD8YLR353W PTC4P38089 393 aa7.08□□□□□ -1.28
BUD8YLR353W PKH3Q03306 898 aaPredicted RBP7.08□□□□□ -1.28
BUD8YLR353W CDC73Q06697 393 aa7.08□□□□□ -1.28
BUD8YLR353W SEC7P11075 2009 aaKnown RBP7.08□□□□□ -1.28
BUD8YLR353W YML020WQ03722 664 aa7.08□□□□□ -1.28
BUD8YLR353W ERG12P07277 443 aa7.07□□□□□ -1.28
BUD8YLR353W ESS1P22696 170 aa7.07□□□□□ -1.28
BUD8YLR353W IML1P47170 1584 aa7.06□□□□□ -1.28
BUD8YLR353W SCJ1P25303 377 aa7.06□□□□□ -1.28
BUD8YLR353W GCN2P15442 1659 aa7.06□□□□□ -1.28
BUD8YLR353W PEX21P50091 288 aa7.06□□□□□ -1.28
BUD8YLR353W NOP8Q08287 484 aaPredicted RBP7.06□□□□□ -1.28
BUD8YLR353W WSC3Q12215 556 aa7.06□□□□□ -1.28
BUD8YLR353W TRP5P00931 707 aaKnown RBP7.05□□□□□ -1.28
BUD8YLR353W JIP4Q03361 876 aa7.05□□□□□ -1.28
BUD8YLR353W YJU3P28321 313 aa7.04□□□□□ -1.28
BUD8YLR353W SLX8P40072 274 aa7.04□□□□□ -1.28
BUD8YLR353W PDR11P40550 1411 aa7.04□□□□□ -1.28
BUD8YLR353W RTG2P32608 588 aaKnown RBP7.04□□□□□ -1.28
BUD8YLR353W TTI1P36097 1038 aa7.04□□□□□ -1.28
BUD8YLR353W YPR204WQ08995 1032 aa7.04□□□□□ -1.28
BUD8YLR353W POL1P13382 1468 aa7.03□□□□□ -1.28
BUD8YLR353W MAC1P35192 417 aa7.03□□□□□ -1.28
BUD8YLR353W UGA2P38067 497 aa7.03□□□□□ -1.28
BUD8YLR353W TUM1Q08686 304 aaKnown RBP7.03□□□□□ -1.28
BUD8YLR353W UBP1P25037 809 aa7.02□□□□□ -1.29
BUD8YLR353W CPS1P27614 576 aa7.02□□□□□ -1.29
BUD8YLR353W YNL108CP53929 270 aa7.02□□□□□ -1.29
BUD8YLR353W SUP45P12385 437 aaKnown RBP7.01□□□□□ -1.29
BUD8YLR353W ARG8P18544 423 aa7.01□□□□□ -1.29
BUD8YLR353W RTT106P40161 455 aa7.01□□□□□ -1.29
BUD8YLR353W NUM1Q00402 2748 aa7.01□□□□□ -1.29
BUD8YLR353W SDH2P21801 266 aa7.01□□□□□ -1.29
BUD8YLR353W SPT5P27692 1063 aaKnown RBP7□□□□□ -1.29
BUD8YLR353W DPL1Q05567 589 aa7□□□□□ -1.29
BUD8YLR353W RSC30P38781 883 aa6.99□□□□□ -1.29
BUD8YLR353W RTF1P53064 558 aa6.99□□□□□ -1.29
BUD8YLR353W LAM6Q08001 693 aa6.99□□□□□ -1.29
BUD8YLR353W MAK16P10962 306 aaPredicted RBP6.97□□□□□ -1.29
BUD8YLR353W SLY41P22215 453 aa6.97□□□□□ -1.29
BUD8YLR353W YNL115CP53925 644 aa6.97□□□□□ -1.29
BUD8YLR353W MPC54Q08550 464 aa6.97□□□□□ -1.29
BUD8YLR353W YRR1Q12172 810 aa6.97□□□□□ -1.29
BUD8YLR353W IMH1Q06704 911 aaKnown RBP6.97□□□□□ -1.29
BUD8YLR353W NOB1Q08444 459 aaKnown RBP6.97□□□□□ -1.29
BUD8YLR353W ENO2P00925 437 aaKnown RBP6.96□□□□□ -1.3
BUD8YLR353W SIS2P36024 562 aa6.96□□□□□ -1.3
BUD8YLR353W TIF11P38912 153 aaKnown RBP6.96□□□□□ -1.3
BUD8YLR353W VNX1P42839 908 aa6.96□□□□□ -1.3
BUD8YLR353W ULI1P43604 169 aa6.96□□□□□ -1.3
BUD8YLR353W URN1Q06525 465 aaKnown RBP6.96□□□□□ -1.3
BUD8YLR353W MID1P41821 548 aa6.95□□□□□ -1.3
BUD8YLR353W YBL029C-AQ3E756 94 aa6.95□□□□□ -1.3
BUD8YLR353W YDJ1P25491 409 aaKnown RBP6.94□□□□□ -1.3
BUD8YLR353W PML39Q03760 334 aa6.94□□□□□ -1.3
BUD8YLR353W MRX10Q05648 414 aa6.94□□□□□ -1.3
BUD8YLR353W ISU2Q12056 156 aa6.94□□□□□ -1.3
BUD8YLR353W ENO1P00924 437 aaKnown RBP6.94□□□□□ -1.3
BUD8YLR353W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
BUD8YLR353W RPL34AP87262 121 aaPredicted RBP6.94□□□□□ -1.3
BUD8YLR353W RIM21P48565 533 aa6.93□□□□□ -1.3
BUD8YLR353W YNL035CP53962 389 aaKnown RBP6.93□□□□□ -1.3
BUD8YLR353W ENT1Q12518 454 aa6.93□□□□□ -1.3
BUD8YLR353W IOC2Q12072 812 aa6.92□□□□□ -1.3
BUD8YLR353W TRM1P15565 570 aaKnown RBP6.92□□□□□ -1.3
BUD8YLR353W YPR117WQ06116 2489 aa6.91□□□□□ -1.3
BUD8YLR353W PUP1P25043 261 aa6.91□□□□□ -1.3
BUD8YLR353W CDC3P32457 520 aaKnown RBP6.91□□□□□ -1.3
BUD8YLR353W NAF1P53919 492 aaKnown RBP6.91□□□□□ -1.3
BUD8YLR353W SPP1Q03012 353 aa6.9□□□□□ -1.3
BUD8YLR353W STH1P32597 1359 aa6.9□□□□□ -1.3
BUD8YLR353W YPP1P46951 817 aa6.9□□□□□ -1.31
BUD8YLR353W PUS6P53294 404 aa6.9□□□□□ -1.31
BUD8YLR353W NMA111P53920 997 aa6.9□□□□□ -1.31
BUD8YLR353W PDR5P33302 1511 aaKnown RBP6.89□□□□□ -1.31
BUD8YLR353W NUD1P32336 851 aa6.89□□□□□ -1.31
BUD8YLR353W PEX29Q03370 554 aa6.89□□□□□ -1.31
BUD8YLR353W PUS5Q06244 254 aa6.89□□□□□ -1.31
BUD8YLR353W KEX2P13134 814 aa6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms