RNA–Protein interactions for RNA: YLR074C

BUD20, Transcript of C2H2-type zinc finger protein required for ribosome assembly, yeastyeast

Gene BUD20, Length 501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD20YLR074C RIX7Q07844 837 aaKnown RBP11.1□□□□□ -0.63
BUD20YLR074C GRX1P25373 110 aaKnown RBP11.08□□□□□ -0.64
BUD20YLR074C RIM15P43565 1770 aa11.07□□□□□ -0.64
BUD20YLR074C DPS1P04802 557 aaKnown RBP11.05□□□□□ -0.64
BUD20YLR074C NYV1Q12255 253 aa11.05□□□□□ -0.64
BUD20YLR074C SLI15P38283 698 aa11.04□□□□□ -0.64
BUD20YLR074C GAS4Q08271 471 aa11.04□□□□□ -0.64
BUD20YLR074C OSM1P21375 501 aaKnown RBP11.02□□□□□ -0.65
BUD20YLR074C ETP1P38748 585 aaKnown RBP11.02□□□□□ -0.65
BUD20YLR074C RET1P22276 1149 aaKnown RBP10.99□□□□□ -0.65
BUD20YLR074C POM152P39685 1337 aa10.99□□□□□ -0.65
BUD20YLR074C YML133CQ03099 1374 aa10.99□□□□□ -0.65
BUD20YLR074C YLL067CQ07888 1374 aa10.99□□□□□ -0.65
BUD20YLR074C YLL066CQ99208 1374 aa10.99□□□□□ -0.65
BUD20YLR074C THS1P04801 734 aaKnown RBP10.98□□□□□ -0.65
BUD20YLR074C YLR278CQ05854 1341 aa10.98□□□□□ -0.65
BUD20YLR074C TOP1P04786 769 aa10.97□□□□□ -0.65
BUD20YLR074C SDH2P21801 266 aa10.97□□□□□ -0.65
BUD20YLR074C INP54Q08227 384 aaKnown RBP10.97□□□□□ -0.65
BUD20YLR074C CTI6Q08923 506 aa10.96□□□□□ -0.65
BUD20YLR074C PFF1P38244 976 aa10.95□□□□□ -0.66
BUD20YLR074C NST1P53935 1240 aa10.95□□□□□ -0.66
BUD20YLR074C ATG20Q07528 640 aa10.95□□□□□ -0.66
BUD20YLR074C TUM1Q08686 304 aaKnown RBP10.95□□□□□ -0.66
BUD20YLR074C SMY1P32364 656 aaKnown RBP10.93□□□□□ -0.66
BUD20YLR074C YBP2P53169 641 aa10.93□□□□□ -0.66
BUD20YLR074C RPS9BP05755 195 aaKnown RBP10.92□□□□□ -0.66
BUD20YLR074C RTG2P32608 588 aaKnown RBP10.92□□□□□ -0.66
BUD20YLR074C RTF1P53064 558 aa10.92□□□□□ -0.66
BUD20YLR074C MAC1P35192 417 aa10.91□□□□□ -0.66
BUD20YLR074C ICL1P28240 557 aaPredicted RBP10.9□□□□□ -0.66
BUD20YLR074C VHR2P40041 505 aa10.9□□□□□ -0.66
BUD20YLR074C PDI1P17967 522 aaKnown RBP10.89□□□□□ -0.67
BUD20YLR074C SHC1P39000 512 aa10.89□□□□□ -0.67
BUD20YLR074C VPS13Q07878 3144 aa10.86□□□□□ -0.67
BUD20YLR074C ERO1Q03103 563 aa10.85□□□□□ -0.67
BUD20YLR074C YKU70P32807 602 aa10.84□□□□□ -0.67
BUD20YLR074C BUD27P43573 796 aaKnown RBP RIP-Chip data10.84□□□□□ -0.67not detected
BUD20YLR074C ORC1P54784 914 aaPredicted RBP10.84□□□□□ -0.67
BUD20YLR074C SEC3P33332 1336 aaKnown RBP10.84□□□□□ -0.67
BUD20YLR074C LPD1P09624 499 aaKnown RBP10.83□□□□□ -0.68
BUD20YLR074C YIL089WP40500 205 aa10.83□□□□□ -0.68
BUD20YLR074C GRX4P32642 244 aa10.81□□□□□ -0.68
BUD20YLR074C SCT1P32784 759 aa10.81□□□□□ -0.68
BUD20YLR074C FKH1P40466 484 aa10.81□□□□□ -0.68
BUD20YLR074C TEA1P47988 759 aa10.81□□□□□ -0.68
BUD20YLR074C SRF1Q12516 437 aa10.81□□□□□ -0.68
BUD20YLR074C AUS1Q08409 1394 aa10.8□□□□□ -0.68
BUD20YLR074C PIB1Q06651 286 aa10.8□□□□□ -0.68
BUD20YLR074C NUP145P49687 1317 aa10.8□□□□□ -0.68
BUD20YLR074C IRC3Q06683 689 aa10.79□□□□□ -0.68
BUD20YLR074C YKR023WP36119 530 aaKnown RBP10.78□□□□□ -0.68
BUD20YLR074C TAP42Q04372 366 aa10.78□□□□□ -0.68
BUD20YLR074C DIP2Q12220 943 aaPredicted RBP10.78□□□□□ -0.68
BUD20YLR074C TIF6Q12522 245 aaKnown RBP10.78□□□□□ -0.68
BUD20YLR074C HIM1Q06674 414 aa10.77□□□□□ -0.69
BUD20YLR074C CAF20P12962 161 aaKnown RBP10.76□□□□□ -0.69
BUD20YLR074C SIT4P20604 311 aa10.76□□□□□ -0.69
BUD20YLR074C RAT1Q02792 1006 aaKnown RBP10.76□□□□□ -0.69
BUD20YLR074C BDF2Q07442 638 aa10.76□□□□□ -0.69
BUD20YLR074C GAP1P19145 602 aaPredicted RBP10.75□□□□□ -0.69
BUD20YLR074C SER1P33330 395 aaKnown RBP10.75□□□□□ -0.69
BUD20YLR074C MSM1P22438 575 aa10.74□□□□□ -0.69
BUD20YLR074C FET4P40988 552 aa10.74□□□□□ -0.69
BUD20YLR074C GRX6Q12438 231 aa10.74□□□□□ -0.69
BUD20YLR074C FAS2P19097 1887 aaKnown RBP10.74□□□□□ -0.69
BUD20YLR074C HSP104P31539 908 aaKnown RBP10.73□□□□□ -0.69
BUD20YLR074C GLC3P32775 704 aa10.73□□□□□ -0.69
BUD20YLR074C RMT2Q03305 412 aa10.73□□□□□ -0.69
BUD20YLR074C PEA2P40091 420 aa10.72□□□□□ -0.69
BUD20YLR074C CTF4Q01454 927 aa10.72□□□□□ -0.69
BUD20YLR074C TYW1Q08960 810 aaKnown RBP10.72□□□□□ -0.69
BUD20YLR074C BUB1P41695 1021 aaKnown RBP RIP-Chip data10.71□□□□□ -0.69not detected
BUD20YLR074C YFR016CP43597 1233 aaKnown RBP10.71□□□□□ -0.69
BUD20YLR074C MDG1P53885 366 aa10.71□□□□□ -0.69
BUD20YLR074C NOP53Q12080 455 aaKnown RBP10.71□□□□□ -0.69
BUD20YLR074C AIM7Q12156 149 aa10.71□□□□□ -0.69
BUD20YLR074C PHM7Q12252 991 aa10.71□□□□□ -0.69
BUD20YLR074C NCS6P53088 359 aa10.7□□□□□ -0.7
BUD20YLR074C DSD1P53095 428 aa10.7□□□□□ -0.7
BUD20YLR074C RTG3P38165 486 aa10.69□□□□□ -0.7
BUD20YLR074C TIM50Q02776 476 aa10.69□□□□□ -0.7
BUD20YLR074C DIB1Q06819 143 aaPredicted RBP10.69□□□□□ -0.7
BUD20YLR074C YGL082WP53155 381 aa10.68□□□□□ -0.7
BUD20YLR074C CWC15Q03772 175 aaKnown RBP10.67□□□□□ -0.7
BUD20YLR074C DPL1Q05567 589 aa10.67□□□□□ -0.7
BUD20YLR074C PMD1P32634 1753 aa10.67□□□□□ -0.7
BUD20YLR074C PAM1P37304 830 aaKnown RBP10.66□□□□□ -0.7
BUD20YLR074C HVG1P0CE11 249 aa10.65□□□□□ -0.7
BUD20YLR074C EMP47P43555 445 aa10.65□□□□□ -0.7
BUD20YLR074C FIG2P25653 1609 aa10.65□□□□□ -0.7
BUD20YLR074C MLP1Q02455 1875 aaKnown RBP10.64□□□□□ -0.71
BUD20YLR074C YGR117CP53270 476 aa10.64□□□□□ -0.71
BUD20YLR074C BSD2P38356 321 aa10.63□□□□□ -0.71
BUD20YLR074C UTP10P42945 1769 aaKnown RBP10.62□□□□□ -0.71
BUD20YLR074C UBP16Q02863 499 aa10.62□□□□□ -0.71
BUD20YLR074C FRD1P32614 470 aaKnown RBP10.61□□□□□ -0.71
BUD20YLR074C RPN1P38764 993 aaKnown RBP10.61□□□□□ -0.71
BUD20YLR074C TRM44Q02648 567 aaKnown RBP10.61□□□□□ -0.71
BUD20YLR074C ALE1Q08548 619 aa10.61□□□□□ -0.71
Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms