RNA–Protein interactions for RNA: YLR048W

RPS0B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS0B, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS0B	YLR048W	EAP1	P36041	632 aa	Known RBP	6.61	□□□□□ -1.35
RPS0B	YLR048W	ALD4	P46367	519 aa	Known RBP	6.61	□□□□□ -1.35
RPS0B	YLR048W	JIP4	Q03361	876 aa		6.61	□□□□□ -1.35
RPS0B	YLR048W	UTP13	Q05946	817 aa	Known RBP	6.61	□□□□□ -1.35
RPS0B	YLR048W	MPC54	Q08550	464 aa		6.61	□□□□□ -1.35
RPS0B	YLR048W	YDL206W	Q12424	762 aa		6.61	□□□□□ -1.35
RPS0B	YLR048W	STB3	Q12427	513 aa		6.61	□□□□□ -1.35
RPS0B	YLR048W	NUD1	P32336	851 aa		6.6	□□□□□ -1.35
RPS0B	YLR048W	QDR1	P40475	563 aa		6.6	□□□□□ -1.35
RPS0B	YLR048W	YJR107W	P47145	328 aa		6.6	□□□□□ -1.35
RPS0B	YLR048W	NUT2	Q06213	157 aa		6.6	□□□□□ -1.35
RPS0B	YLR048W	JIP5	Q06214	492 aa	Predicted RBP	6.6	□□□□□ -1.35
RPS0B	YLR048W	SOH1	P38633	127 aa		6.59	□□□□□ -1.35
RPS0B	YLR048W	GLO3	P38682	493 aa	Known RBP	6.59	□□□□□ -1.35
RPS0B	YLR048W	NMD2	P38798	1089 aa	Known RBP	6.59	□□□□□ -1.35
RPS0B	YLR048W	YAF9	P53930	226 aa		6.59	□□□□□ -1.35
RPS0B	YLR048W	GAS4	Q08271	471 aa		6.59	□□□□□ -1.35
RPS0B	YLR048W	TRP5	P00931	707 aa	Known RBP	6.58	□□□□□ -1.36
RPS0B	YLR048W	NPL4	P33755	580 aa		6.58	□□□□□ -1.36
RPS0B	YLR048W	CST6	P40535	587 aa		6.58	□□□□□ -1.36
RPS0B	YLR048W	MID1	P41821	548 aa		6.58	□□□□□ -1.36
RPS0B	YLR048W	FIG4	P42837	879 aa		6.58	□□□□□ -1.36
RPS0B	YLR048W	TSC13	Q99190	310 aa		6.58	□□□□□ -1.36
RPS0B	YLR048W	APL6	P46682	809 aa		6.57	□□□□□ -1.36
RPS0B	YLR048W	RPA14	P50106	137 aa		6.57	□□□□□ -1.36
RPS0B	YLR048W	FAR11	P53917	953 aa		6.57	□□□□□ -1.36
RPS0B	YLR048W	MAG2	Q06436	670 aa	Known RBP	6.57	□□□□□ -1.36
RPS0B	YLR048W	YPR084W	Q06821	456 aa		6.57	□□□□□ -1.36
RPS0B	YLR048W	FRT1	Q99332	602 aa		6.57	□□□□□ -1.36
RPS0B	YLR048W	VAN1	P23642	535 aa		6.56	□□□□□ -1.36
RPS0B	YLR048W	MET4	P32389	672 aa		6.56	□□□□□ -1.36
RPS0B	YLR048W	MET1	P36150	593 aa		6.56	□□□□□ -1.36
RPS0B	YLR048W	YPR097W	Q06839	1073 aa		6.56	□□□□□ -1.36
RPS0B	YLR048W	YOL098C	Q12496	1037 aa		6.56	□□□□□ -1.36
RPS0B	YLR048W	PDI1	P17967	522 aa	Known RBP	6.55	□□□□□ -1.36
RPS0B	YLR048W	TUB4	P53378	473 aa		6.55	□□□□□ -1.36
RPS0B	YLR048W	NMA111	P53920	997 aa		6.55	□□□□□ -1.36
RPS0B	YLR048W	PML39	Q03760	334 aa		6.55	□□□□□ -1.36
RPS0B	YLR048W	AGE1	Q04412	482 aa		6.55	□□□□□ -1.36
RPS0B	YLR048W	WSC3	Q12215	556 aa		6.55	□□□□□ -1.36
RPS0B	YLR048W	TRS33	Q99394	268 aa		6.55	□□□□□ -1.36
RPS0B	YLR048W	ALR1	Q08269	859 aa		6.54	□□□□□ -1.36
RPS0B	YLR048W	PEX29	Q03370	554 aa		6.53	□□□□□ -1.36
RPS0B	YLR048W	MNL2	Q12205	849 aa		6.53	□□□□□ -1.36
RPS0B	YLR048W	LSO1	Q3E827	93 aa		6.53	□□□□□ -1.36
RPS0B	YLR048W	RAM1	P22007	431 aa		6.52	□□□□□ -1.37
RPS0B	YLR048W	YFL034W	P43564	1073 aa		6.52	□□□□□ -1.37
RPS0B	YLR048W	TOP1	P04786	769 aa		6.51	□□□□□ -1.37
RPS0B	YLR048W	ISM1	P48526	1002 aa		6.51	□□□□□ -1.37
RPS0B	YLR048W	RNH70	P53331	553 aa		6.51	□□□□□ -1.37
RPS0B	YLR048W	PDR1	P12383	1068 aa		6.5	□□□□□ -1.37
RPS0B	YLR048W	GCD11	P32481	527 aa	Known RBP	6.5	□□□□□ -1.37
RPS0B	YLR048W	VAC8	P39968	578 aa		6.5	□□□□□ -1.37
RPS0B	YLR048W	FYV10	P40492	516 aa		6.5	□□□□□ -1.37
RPS0B	YLR048W	SPR3	P41901	512 aa		6.5	□□□□□ -1.37
RPS0B	YLR048W	STR2	P47164	639 aa		6.5	□□□□□ -1.37
RPS0B	YLR048W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
RPS0B	YLR048W	SPT2	P06843	333 aa	Predicted RBP	6.49	□□□□□ -1.37
RPS0B	YLR048W	TRS120	Q04183	1289 aa		6.49	□□□□□ -1.37
RPS0B	YLR048W	PDC1	P06169	563 aa	Known RBP	6.48	□□□□□ -1.37
RPS0B	YLR048W	SUV3	P32580	737 aa		6.48	□□□□□ -1.37
RPS0B	YLR048W	SRP40	P32583	406 aa	Predicted RBP	6.48	□□□□□ -1.37
RPS0B	YLR048W	AIM9	P40053	627 aa	Known RBP	6.48	□□□□□ -1.37
RPS0B	YLR048W	MAD1	P40957	749 aa		6.48	□□□□□ -1.37
RPS0B	YLR048W	CWH41	P53008	833 aa		6.48	□□□□□ -1.37
RPS0B	YLR048W	ALD3	P54114	506 aa		6.48	□□□□□ -1.37
RPS0B	YLR048W	ALD6	P54115	500 aa	Known RBP	6.48	□□□□□ -1.37
RPS0B	YLR048W	TY1A-DR4	O74302	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-H	P0C2I4	478 aa	Known RBP	6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-A	P0CX57	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-PR1	P0CX58	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-OR	P0CX59	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-PR2	P0CX60	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-DR5	P0CX65	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-ER2	P0CX66	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-GR3	P0CX67	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-LR1	P0CX68	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-MR2	P0CX69	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	MIP1	P15801	1254 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	SEC2	P17065	759 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	HAL5	P38970	855 aa	Known RBP	6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-JR2	P47099	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	KXD1	P53158	218 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-DR1	Q03856	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-ML1	Q04706	440 aa	Known RBP	6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-BR	Q12217	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-NL2	Q12470	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	TY1A-GR2	Q12485	440 aa		6.47	□□□□□ -1.37
RPS0B	YLR048W	PHO4	P07270	312 aa	Known RBP	6.46	□□□□□ -1.38
RPS0B	YLR048W	UBP1	P25037	809 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	MCM2	P29469	868 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	PPG1	P32838	368 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	IXR1	P33417	597 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	NTH2	P35172	780 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	BOI1	P38041	980 aa	Known RBP	6.46	□□□□□ -1.38
RPS0B	YLR048W	ULI1	P43604	169 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	YNL035C	P53962	389 aa	Known RBP	6.46	□□□□□ -1.38
RPS0B	YLR048W	RMD1	Q03441	430 aa		6.46	□□□□□ -1.38
RPS0B	YLR048W	ISR1	Q06098	443 aa	Known RBP	6.46	□□□□□ -1.38
RPS0B	YLR048W	GPI13	Q07830	1017 aa		6.46	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms