RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C GCR2Q01722 534 aa9.62□□□□□ -0.87
SED5YLR026C MRT4P33201 236 aaKnown RBP9.61□□□□□ -0.87
SED5YLR026C YDJ1P25491 409 aaKnown RBP9.6□□□□□ -0.87
SED5YLR026C BIO2P32451 375 aa9.6□□□□□ -0.87
SED5YLR026C NAF1P53919 492 aaKnown RBP9.6□□□□□ -0.87
SED5YLR026C YPR084WQ06821 456 aa9.6□□□□□ -0.87
SED5YLR026C DMA2P53924 522 aa9.58□□□□□ -0.88
SED5YLR026C UGA3P26370 528 aa9.57□□□□□ -0.88
SED5YLR026C GUT2P32191 649 aa9.57□□□□□ -0.88
SED5YLR026C YJL007CP47080 104 aa9.57□□□□□ -0.88
SED5YLR026C YJR115WP47152 169 aa9.57□□□□□ -0.88
SED5YLR026C ISF1P32488 338 aa9.56□□□□□ -0.88
SED5YLR026C EMW1P42842 904 aaKnown RBP9.55□□□□□ -0.88
SED5YLR026C MSB3P48566 633 aaPredicted RBP9.55□□□□□ -0.88
SED5YLR026C YNL108CP53929 270 aa9.55□□□□□ -0.88
SED5YLR026C SPT5P27692 1063 aaKnown RBP9.54□□□□□ -0.88
SED5YLR026C HGH1P48362 394 aaKnown RBP9.54□□□□□ -0.88
SED5YLR026C STE20Q03497 939 aaKnown RBP9.53□□□□□ -0.88
SED5YLR026C MCM16Q12262 181 aa9.53□□□□□ -0.88
SED5YLR026C EMP47P43555 445 aa9.52□□□□□ -0.89
SED5YLR026C YBL086CP38177 466 aa9.51□□□□□ -0.89
SED5YLR026C FRA1Q07825 749 aa9.51□□□□□ -0.89
SED5YLR026C BIM1P40013 344 aa9.5□□□□□ -0.89
SED5YLR026C SUP45P12385 437 aaKnown RBP9.49□□□□□ -0.89
SED5YLR026C ATG32P40458 529 aa9.49□□□□□ -0.89
SED5YLR026C PTK2P47116 818 aaKnown RBP9.49□□□□□ -0.89
SED5YLR026C ENO2P00925 437 aaKnown RBP9.48□□□□□ -0.89
SED5YLR026C MKS1P34072 584 aa9.47□□□□□ -0.89
SED5YLR026C SRF1Q12516 437 aa9.47□□□□□ -0.89
SED5YLR026C MET22P32179 357 aa9.46□□□□□ -0.9
SED5YLR026C DFG5Q05031 458 aa9.46□□□□□ -0.9
SED5YLR026C GAR1P28007 205 aaKnown RBP9.43□□□□□ -0.9
SED5YLR026C ATG20Q07528 640 aa9.43□□□□□ -0.9
SED5YLR026C RTT106P40161 455 aa9.42□□□□□ -0.9
SED5YLR026C TIF1P10081 395 aaKnown RBP9.41□□□□□ -0.9
SED5YLR026C FBP26P32604 452 aa9.41□□□□□ -0.9
SED5YLR026C RPL34BP40525 121 aaKnown RBP9.4□□□□□ -0.9
SED5YLR026C MRX12P47084 519 aa9.4□□□□□ -0.9
SED5YLR026C YDR444WQ04093 687 aa9.4□□□□□ -0.9
SED5YLR026C ENV9Q08651 330 aa9.4□□□□□ -0.9
SED5YLR026C AAD14P42884 376 aa9.39□□□□□ -0.91
SED5YLR026C RIM21P48565 533 aa9.39□□□□□ -0.91
SED5YLR026C ARG82P07250 355 aa9.38□□□□□ -0.91
SED5YLR026C APL6P46682 809 aa9.38□□□□□ -0.91
SED5YLR026C YPP1P46951 817 aa9.38□□□□□ -0.91
SED5YLR026C ISR1Q06098 443 aaKnown RBP9.38□□□□□ -0.91
SED5YLR026C BDS1Q08347 646 aa9.38□□□□□ -0.91
SED5YLR026C RTG2P32608 588 aaKnown RBP9.37□□□□□ -0.91
SED5YLR026C ISU1Q03020 165 aa9.37□□□□□ -0.91
SED5YLR026C SOH1P38633 127 aa9.36□□□□□ -0.91
SED5YLR026C NUP85P46673 744 aa9.36□□□□□ -0.91
SED5YLR026C LCB5Q06147 687 aaKnown RBP9.36□□□□□ -0.91
SED5YLR026C STE6P12866 1290 aa9.35□□□□□ -0.91
SED5YLR026C DLD1P32891 587 aa9.35□□□□□ -0.91
SED5YLR026C ENO1P00924 437 aaKnown RBP9.34□□□□□ -0.91
SED5YLR026C HAL5P38970 855 aaKnown RBP9.34□□□□□ -0.91
SED5YLR026C OPT2Q06593 877 aa9.34□□□□□ -0.91
SED5YLR026C RDS2P19541 446 aaKnown RBP9.33□□□□□ -0.92
SED5YLR026C GBP2P25555 427 aaKnown RBP RIP-Chip data9.33□□□□□ -0.92not detected
SED5YLR026C YPR204WQ08995 1032 aa9.33□□□□□ -0.92
SED5YLR026C MRX10Q05648 414 aa9.32□□□□□ -0.92
SED5YLR026C ATG3P40344 310 aa9.3□□□□□ -0.92
SED5YLR026C LSC2P53312 427 aa9.3□□□□□ -0.92
SED5YLR026C YLR346CQ06139 101 aa9.29□□□□□ -0.92
SED5YLR026C YJR098CP47139 656 aa9.28□□□□□ -0.92
SED5YLR026C DAT1P13483 248 aaKnown RBP9.27□□□□□ -0.93
SED5YLR026C UTP13Q05946 817 aaKnown RBP9.27□□□□□ -0.93
SED5YLR026C WTM2Q12206 467 aa9.27□□□□□ -0.93
SED5YLR026C MIP1P15801 1254 aa9.26□□□□□ -0.93
SED5YLR026C UTR2P32623 467 aa9.26□□□□□ -0.93
SED5YLR026C TCB1Q12466 1186 aa9.26□□□□□ -0.93
SED5YLR026C HDA3Q06623 655 aa9.25□□□□□ -0.93
SED5YLR026C SPT2P06843 333 aaPredicted RBP9.24□□□□□ -0.93
SED5YLR026C GLY1P37303 387 aaKnown RBP9.23□□□□□ -0.93
SED5YLR026C DLD3P39976 496 aaKnown RBP9.23□□□□□ -0.93
SED5YLR026C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.23□□□□□ -0.93not detected
SED5YLR026C RPP2BP02400 110 aaKnown RBP9.22□□□□□ -0.93
SED5YLR026C SCW11P53189 542 aa9.22□□□□□ -0.93
SED5YLR026C TY1A-BLQ12266 440 aa9.21□□□□□ -0.94
SED5YLR026C KTR7P40504 517 aa9.2□□□□□ -0.94
SED5YLR026C CAF120P53836 1060 aa9.2□□□□□ -0.94
SED5YLR026C UBP2Q01476 1272 aa9.2□□□□□ -0.94
SED5YLR026C YDL176WQ12027 708 aa9.2□□□□□ -0.94
SED5YLR026C PEP12P32854 288 aa9.19□□□□□ -0.94
SED5YLR026C TBS1P38114 1094 aa9.19□□□□□ -0.94
SED5YLR026C UTP7P40055 554 aaKnown RBP9.19□□□□□ -0.94
SED5YLR026C YPL062WQ02781 134 aa9.18□□□□□ -0.94
SED5YLR026C SLX8P40072 274 aa9.17□□□□□ -0.94
SED5YLR026C ACO2P39533 789 aa9.15□□□□□ -0.94
SED5YLR026C AIM9P40053 627 aaKnown RBP9.15□□□□□ -0.94
SED5YLR026C OSH7P38755 437 aa9.14□□□□□ -0.95
SED5YLR026C YIR007WP40566 764 aa9.14□□□□□ -0.95
SED5YLR026C PDI1P17967 522 aaKnown RBP9.13□□□□□ -0.95
SED5YLR026C TTI1P36097 1038 aa9.13□□□□□ -0.95
SED5YLR026C RGA1P39083 1007 aa9.13□□□□□ -0.95
SED5YLR026C SSN3P39073 555 aa9.12□□□□□ -0.95
SED5YLR026C SWI5P08153 709 aa9.11□□□□□ -0.95
SED5YLR026C CPS1P27614 576 aa9.1□□□□□ -0.95
SED5YLR026C NTH2P35172 780 aa9.1□□□□□ -0.95
SED5YLR026C SUM1P46676 1062 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms