RNA–Protein interactions for RNA: YLR008C

PAM18, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM18, Length 507 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM18	YLR008C	BDP1	P46678	594 aa		5.31	□□□□□ -1.56
PAM18	YLR008C	YJL007C	P47080	104 aa		5.31	□□□□□ -1.56
PAM18	YLR008C	BRN1	P38170	754 aa		5.3	□□□□□ -1.56
PAM18	YLR008C	MRX12	P47084	519 aa		5.3	□□□□□ -1.56
PAM18	YLR008C	YPR097W	Q06839	1073 aa		5.3	□□□□□ -1.56
PAM18	YLR008C	SSA1	P10591	642 aa	Known RBP	5.29	□□□□□ -1.56
PAM18	YLR008C	MDG1	P53885	366 aa		5.29	□□□□□ -1.56
PAM18	YLR008C	PUS5	Q06244	254 aa		5.29	□□□□□ -1.56
PAM18	YLR008C	MOD5	P07884	428 aa		5.28	□□□□□ -1.56
PAM18	YLR008C	MAK16	P10962	306 aa	Predicted RBP	5.28	□□□□□ -1.56
PAM18	YLR008C	CSE4	P36012	229 aa		5.28	□□□□□ -1.56
PAM18	YLR008C	RRD1	P40454	393 aa	Known RBP	5.28	□□□□□ -1.56
PAM18	YLR008C	TCB3	Q03640	1545 aa	Known RBP	5.28	□□□□□ -1.56
PAM18	YLR008C	TRK1	P12685	1235 aa		5.27	□□□□□ -1.57
PAM18	YLR008C	KRI1	P42846	591 aa	Known RBP	5.27	□□□□□ -1.57
PAM18	YLR008C	YFR016C	P43597	1233 aa	Known RBP	5.27	□□□□□ -1.57
PAM18	YLR008C	KIP2	P28743	706 aa		5.26	□□□□□ -1.57
PAM18	YLR008C	BIO2	P32451	375 aa		5.26	□□□□□ -1.57
PAM18	YLR008C	PAM1	P37304	830 aa	Known RBP	5.26	□□□□□ -1.57
PAM18	YLR008C	MET10	P39692	1035 aa		5.26	□□□□□ -1.57
PAM18	YLR008C	RTS3	P53289	263 aa		5.26	□□□□□ -1.57
PAM18	YLR008C	FAR11	P53917	953 aa		5.26	□□□□□ -1.57
PAM18	YLR008C	SUB1	P54000	292 aa	Known RBP	5.26	□□□□□ -1.57
PAM18	YLR008C	SUB2	Q07478	446 aa	Known RBP	5.26	□□□□□ -1.57
PAM18	YLR008C	TPD3	P31383	635 aa		5.25	□□□□□ -1.57
PAM18	YLR008C	BIM1	P40013	344 aa		5.25	□□□□□ -1.57
PAM18	YLR008C	RPL34B	P40525	121 aa	Known RBP	5.25	□□□□□ -1.57
PAM18	YLR008C	YNL108C	P53929	270 aa		5.25	□□□□□ -1.57
PAM18	YLR008C	GIN4	Q12263	1142 aa		5.25	□□□□□ -1.57
PAM18	YLR008C	YTA7	P40340	1379 aa		5.25	□□□□□ -1.57
PAM18	YLR008C	SPC42	P36094	363 aa		5.24	□□□□□ -1.57
PAM18	YLR008C	YJR008W	P47085	338 aa		5.24	□□□□□ -1.57
PAM18	YLR008C	VPS72	Q03388	795 aa		5.24	□□□□□ -1.57
PAM18	YLR008C	TEC1	P18412	486 aa		5.23	□□□□□ -1.57
PAM18	YLR008C	YDJ1	P25491	409 aa	Known RBP	5.23	□□□□□ -1.57
PAM18	YLR008C	ASF1	P32447	279 aa		5.23	□□□□□ -1.57
PAM18	YLR008C	ATG32	P40458	529 aa		5.23	□□□□□ -1.57
PAM18	YLR008C	SPT5	P27692	1063 aa	Known RBP	5.22	□□□□□ -1.57
PAM18	YLR008C	IXR1	P33417	597 aa		5.22	□□□□□ -1.57
PAM18	YLR008C	SIS2	P36024	562 aa		5.22	□□□□□ -1.57
PAM18	YLR008C	CLA4	P48562	842 aa		5.22	□□□□□ -1.57
PAM18	YLR008C	SYH1	Q02875	849 aa	Known RBP	5.22	□□□□□ -1.57
PAM18	YLR008C	VAC17	P25591	423 aa		5.21	□□□□□ -1.58
PAM18	YLR008C	SSF1	P38789	453 aa	Predicted RBP	5.21	□□□□□ -1.58
PAM18	YLR008C	FIG4	P42837	879 aa		5.21	□□□□□ -1.58
PAM18	YLR008C	TPO2	P53283	614 aa		5.21	□□□□□ -1.58
PAM18	YLR008C	NAF1	P53919	492 aa	Known RBP	5.21	□□□□□ -1.58
PAM18	YLR008C	TIF1	P10081	395 aa	Known RBP	5.2	□□□□□ -1.58
PAM18	YLR008C	ISF1	P32488	338 aa		5.2	□□□□□ -1.58
PAM18	YLR008C	HED1	Q03937	162 aa		5.2	□□□□□ -1.58
PAM18	YLR008C	ITT1	Q04638	464 aa		5.2	□□□□□ -1.58
PAM18	YLR008C	RTG2	P32608	588 aa	Known RBP	5.19	□□□□□ -1.58
PAM18	YLR008C	MNN4	P36044	1178 aa		5.19	□□□□□ -1.58
PAM18	YLR008C	AIR1	P40507	360 aa	Known RBP	5.19	□□□□□ -1.58
PAM18	YLR008C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.19	□□□□□ -1.58	not detected
PAM18	YLR008C	DOS2	P54858	310 aa		5.19	□□□□□ -1.58
PAM18	YLR008C	ENO2	P00925	437 aa	Known RBP	5.18	□□□□□ -1.58
PAM18	YLR008C	GUT2	P32191	649 aa		5.18	□□□□□ -1.58
PAM18	YLR008C	RRN6	P32786	894 aa		5.18	□□□□□ -1.58
PAM18	YLR008C	SLD2	P34252	453 aa		5.18	□□□□□ -1.58
PAM18	YLR008C	STE20	Q03497	939 aa	Known RBP	5.18	□□□□□ -1.58
PAM18	YLR008C	BUD21	Q08492	214 aa	Predicted RBP	5.18	□□□□□ -1.58
PAM18	YLR008C	MCM16	Q12262	181 aa		5.18	□□□□□ -1.58
PAM18	YLR008C	SUP45	P12385	437 aa	Known RBP	5.17	□□□□□ -1.58
PAM18	YLR008C	EMP47	P43555	445 aa		5.17	□□□□□ -1.58
PAM18	YLR008C	OSW7	P43611	510 aa		5.17	□□□□□ -1.58
PAM18	YLR008C	YPP1	P46951	817 aa		5.17	□□□□□ -1.58
PAM18	YLR008C	YPR204W	Q08995	1032 aa		5.17	□□□□□ -1.58
PAM18	YLR008C	OCA5	P38738	679 aa		5.16	□□□□□ -1.58
PAM18	YLR008C	APP1	P53933	587 aa		5.16	□□□□□ -1.58
PAM18	YLR008C	YPL062W	Q02781	134 aa		5.16	□□□□□ -1.58
PAM18	YLR008C	YPR084W	Q06821	456 aa		5.15	□□□□□ -1.59
PAM18	YLR008C	CDC4	P07834	779 aa		5.14	□□□□□ -1.59
PAM18	YLR008C	FRA1	Q07825	749 aa		5.14	□□□□□ -1.59
PAM18	YLR008C	MET32	Q12041	191 aa		5.14	□□□□□ -1.59
PAM18	YLR008C	ENO1	P00924	437 aa	Known RBP	5.13	□□□□□ -1.59
PAM18	YLR008C	ALD4	P46367	519 aa	Known RBP	5.13	□□□□□ -1.59
PAM18	YLR008C	RIM21	P48565	533 aa		5.13	□□□□□ -1.59
PAM18	YLR008C	HST3	P53687	447 aa		5.13	□□□□□ -1.59
PAM18	YLR008C	ENV9	Q08651	330 aa		5.13	□□□□□ -1.59
PAM18	YLR008C	SKI3	P17883	1432 aa	Known RBP	5.13	□□□□□ -1.59
PAM18	YLR008C	ASH1	P34233	588 aa		5.12	□□□□□ -1.59
PAM18	YLR008C	RPS0B	P46654	252 aa	Known RBP	5.12	□□□□□ -1.59
PAM18	YLR008C	SEN54	Q02825	467 aa	Predicted RBP	5.11	□□□□□ -1.59
PAM18	YLR008C	UGA3	P26370	528 aa		5.1	□□□□□ -1.59
PAM18	YLR008C	HEM3	P28789	327 aa		5.1	□□□□□ -1.59
PAM18	YLR008C	MRT4	P33201	236 aa	Known RBP	5.1	□□□□□ -1.59
PAM18	YLR008C	ATG3	P40344	310 aa		5.1	□□□□□ -1.59
PAM18	YLR008C	EMW1	P42842	904 aa	Known RBP	5.1	□□□□□ -1.59
PAM18	YLR008C	YAF9	P53930	226 aa		5.1	□□□□□ -1.59
PAM18	YLR008C	ATG20	Q07528	640 aa		5.1	□□□□□ -1.59
PAM18	YLR008C	TY1B-DR4	Q07793	1604 aa		5.1	□□□□□ -1.59
PAM18	YLR008C	AFT1	P22149	690 aa		5.09	□□□□□ -1.59
PAM18	YLR008C	MKS1	P34072	584 aa		5.09	□□□□□ -1.59
PAM18	YLR008C	SOH1	P38633	127 aa		5.09	□□□□□ -1.59
PAM18	YLR008C	MRX10	Q05648	414 aa		5.09	□□□□□ -1.59
PAM18	YLR008C	ISR1	Q06098	443 aa	Known RBP	5.09	□□□□□ -1.59
PAM18	YLR008C	UBX5	Q06682	500 aa		5.09	□□□□□ -1.59
PAM18	YLR008C	SSA4	P22202	642 aa	Known RBP	5.08	□□□□□ -1.6
PAM18	YLR008C	KTR7	P40504	517 aa		5.08	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms