RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C EAF7P53911 425 aaKnown RBP6.97□□□□□ -1.29
SSK1YLR006C DNF3Q12674 1656 aa6.96□□□□□ -1.29
SSK1YLR006C USO1P25386 1790 aa6.96□□□□□ -1.3
SSK1YLR006C YML133CQ03099 1374 aa6.96□□□□□ -1.3
SSK1YLR006C YLL067CQ07888 1374 aa6.96□□□□□ -1.3
SSK1YLR006C YLL066CQ99208 1374 aa6.96□□□□□ -1.3
SSK1YLR006C RTR1P40084 226 aaPredicted RBP6.96□□□□□ -1.3
SSK1YLR006C YNR021WP53723 404 aaKnown RBP6.96□□□□□ -1.3
SSK1YLR006C TLG1Q03322 224 aa6.96□□□□□ -1.3
SSK1YLR006C YLR271WQ06152 274 aa6.96□□□□□ -1.3
SSK1YLR006C FPR4Q06205 392 aaPredicted RBP6.96□□□□□ -1.3
SSK1YLR006C KEX1P09620 729 aa6.95□□□□□ -1.3
SSK1YLR006C OPY1P38271 328 aa6.95□□□□□ -1.3
SSK1YLR006C YDL121CQ07541 149 aa6.95□□□□□ -1.3
SSK1YLR006C KAR2P16474 682 aaKnown RBP6.94□□□□□ -1.3
SSK1YLR006C HEM3P28789 327 aa6.94□□□□□ -1.3
SSK1YLR006C SLD2P34252 453 aa6.94□□□□□ -1.3
SSK1YLR006C BNI1P41832 1953 aa6.94□□□□□ -1.3
SSK1YLR006C BOI2P39969 1040 aa6.94□□□□□ -1.3
SSK1YLR006C TPM2P40414 161 aa6.94□□□□□ -1.3
SSK1YLR006C HAP1P0CE41 1502 aa6.93□□□□□ -1.3
SSK1YLR006C OXP1P28273 1286 aa6.93□□□□□ -1.3
SSK1YLR006C ENV11P53246 860 aa6.93□□□□□ -1.3
SSK1YLR006C CLC1P17891 233 aa6.92□□□□□ -1.3
SSK1YLR006C VMA4P22203 233 aaKnown RBP6.92□□□□□ -1.3
SSK1YLR006C GLC3P32775 704 aa6.92□□□□□ -1.3
SSK1YLR006C NFU1P32860 256 aa6.92□□□□□ -1.3
SSK1YLR006C SAP155P43612 1002 aa6.92□□□□□ -1.3
SSK1YLR006C HGH1P48362 394 aaKnown RBP6.92□□□□□ -1.3
SSK1YLR006C RRP46P53256 223 aaPredicted RBP6.92□□□□□ -1.3
SSK1YLR006C PAP2P53632 584 aaKnown RBP6.92□□□□□ -1.3
SSK1YLR006C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
SSK1YLR006C PSK2Q08217 1101 aa6.92□□□□□ -1.3
SSK1YLR006C KRE5P22023 1365 aa6.92□□□□□ -1.3
SSK1YLR006C TY1B-NL2Q99337 1749 aaKnown RBP6.92□□□□□ -1.3
SSK1YLR006C QCR6P00127 147 aa6.92□□□□□ -1.3
SSK1YLR006C VPS70P47161 811 aa6.92□□□□□ -1.3
SSK1YLR006C SVL3Q03088 825 aaKnown RBP6.92□□□□□ -1.3
SSK1YLR006C AIM7Q12156 149 aa6.92□□□□□ -1.3
SSK1YLR006C TPD3P31383 635 aa6.91□□□□□ -1.3
SSK1YLR006C RNH70P53331 553 aa6.91□□□□□ -1.3
SSK1YLR006C RCM1P53972 490 aa6.91□□□□□ -1.3
SSK1YLR006C ITT1Q04638 464 aa6.91□□□□□ -1.3
SSK1YLR006C YMR196WQ04336 1088 aa6.91□□□□□ -1.3
SSK1YLR006C SEC20P28791 383 aa6.9□□□□□ -1.3
SSK1YLR006C HOS4P40480 1083 aa6.89□□□□□ -1.31
SSK1YLR006C YOL057WQ08225 711 aa6.89□□□□□ -1.31
SSK1YLR006C TSR4P25040 408 aa6.88□□□□□ -1.31
SSK1YLR006C SPT21P35209 758 aa6.88□□□□□ -1.31
SSK1YLR006C CSE4P36012 229 aa6.88□□□□□ -1.31
SSK1YLR006C ALD2P47771 506 aa6.88□□□□□ -1.31
SSK1YLR006C ERP2P39704 215 aa6.88□□□□□ -1.31
SSK1YLR006C MEH1Q02205 184 aa6.88□□□□□ -1.31
SSK1YLR006C THI22Q06490 572 aa6.88□□□□□ -1.31
SSK1YLR006C HIM1Q06674 414 aa6.88□□□□□ -1.31
SSK1YLR006C PDI1P17967 522 aaKnown RBP6.87□□□□□ -1.31
SSK1YLR006C PRD1P25375 712 aa6.87□□□□□ -1.31
SSK1YLR006C GLN1P32288 370 aaKnown RBP6.87□□□□□ -1.31
SSK1YLR006C PPH3P32345 308 aa6.87□□□□□ -1.31
SSK1YLR006C YIL092WP40497 633 aa6.87□□□□□ -1.31
SSK1YLR006C MGA2P40578 1113 aa6.87□□□□□ -1.31
SSK1YLR006C RIA1P53893 1110 aa6.87□□□□□ -1.31
SSK1YLR006C DNM1P54861 757 aa6.87□□□□□ -1.31
SSK1YLR006C TFB3Q03290 321 aa6.87□□□□□ -1.31
SSK1YLR006C PSK1P31374 1356 aa6.87□□□□□ -1.31
SSK1YLR006C HPC2Q01448 625 aa6.86□□□□□ -1.31
SSK1YLR006C SSF2Q12153 453 aaPredicted RBP6.86□□□□□ -1.31
SSK1YLR006C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
SSK1YLR006C FAF1P40546 346 aaPredicted RBP6.86□□□□□ -1.31
SSK1YLR006C BUD27P43573 796 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
SSK1YLR006C POL32P47110 350 aa6.86□□□□□ -1.31
SSK1YLR006C PKC1P24583 1151 aa6.85□□□□□ -1.31
SSK1YLR006C SET1P38827 1080 aaKnown RBP6.85□□□□□ -1.31
SSK1YLR006C NMD3P38861 518 aaKnown RBP6.85□□□□□ -1.31
SSK1YLR006C YIR014WP40570 242 aa6.85□□□□□ -1.31
SSK1YLR006C CST9Q06032 482 aa6.85□□□□□ -1.31
SSK1YLR006C RTT109Q07794 436 aa6.85□□□□□ -1.31
SSK1YLR006C YAH1Q12184 172 aaKnown RBP6.85□□□□□ -1.31
SSK1YLR006C AUS1Q08409 1394 aa6.84□□□□□ -1.31
SSK1YLR006C SNF7P39929 240 aaKnown RBP6.84□□□□□ -1.31
SSK1YLR006C DJP1P40564 432 aa6.84□□□□□ -1.31
SSK1YLR006C HEF3P53978 1044 aaKnown RBP6.84□□□□□ -1.31
SSK1YLR006C PUF6Q04373 656 aaKnown RBP6.84□□□□□ -1.31
SSK1YLR006C TMA64Q04600 565 aaKnown RBP6.84□□□□□ -1.31
SSK1YLR006C RRP15Q06511 250 aaPredicted RBP6.84□□□□□ -1.31
SSK1YLR006C NOB1Q08444 459 aaKnown RBP6.84□□□□□ -1.31
SSK1YLR006C PRI1P10363 409 aa6.83□□□□□ -1.32
SSK1YLR006C PCT1P13259 424 aa6.83□□□□□ -1.32
SSK1YLR006C RTF1P53064 558 aa6.83□□□□□ -1.32
SSK1YLR006C RPL17AP05740 184 aaKnown RBP6.83□□□□□ -1.32
SSK1YLR006C PWP2P25635 923 aaKnown RBP6.83□□□□□ -1.32
SSK1YLR006C RPL17BP46990 184 aaKnown RBP6.83□□□□□ -1.32
SSK1YLR006C NNF1P47149 201 aa6.83□□□□□ -1.32
SSK1YLR006C TAP42Q04372 366 aa6.83□□□□□ -1.32
SSK1YLR006C MAK21Q12176 1025 aaKnown RBP6.83□□□□□ -1.32
SSK1YLR006C SNU66Q12420 587 aaPredicted RBP6.83□□□□□ -1.32
SSK1YLR006C LEU2P04173 364 aaPredicted RBP6.82□□□□□ -1.32
SSK1YLR006C PKH1Q03407 766 aa6.82□□□□□ -1.32
SSK1YLR006C ECM16Q04217 1267 aaKnown RBP6.82□□□□□ -1.32
SSK1YLR006C SSB1P11484 613 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms