RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C YBL036CP38197 257 aa6.3□□□□□ -1.4
SRP40YKR092C YJR115WP47152 169 aa6.3□□□□□ -1.4
SRP40YKR092C YPR097WQ06839 1073 aa6.3□□□□□ -1.4
SRP40YKR092C RSC30P38781 883 aa6.29□□□□□ -1.4
SRP40YKR092C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.29□□□□□ -1.4not detected
SRP40YKR092C RLF2Q12495 606 aa6.29□□□□□ -1.4
SRP40YKR092C KIP2P28743 706 aa6.28□□□□□ -1.4
SRP40YKR092C CSE4P36012 229 aa6.27□□□□□ -1.41
SRP40YKR092C LCB5Q06147 687 aaKnown RBP6.27□□□□□ -1.41
SRP40YKR092C BIM1P40013 344 aa6.26□□□□□ -1.41
SRP40YKR092C MSB3P48566 633 aaPredicted RBP6.26□□□□□ -1.41
SRP40YKR092C IXR1P33417 597 aa6.25□□□□□ -1.41
SRP40YKR092C UGA3P26370 528 aa6.24□□□□□ -1.41
SRP40YKR092C MAK16P10962 306 aaPredicted RBP6.22□□□□□ -1.41
SRP40YKR092C ATG32P40458 529 aa6.22□□□□□ -1.41
SRP40YKR092C BIO2P32451 375 aa6.21□□□□□ -1.42
SRP40YKR092C RPL34BP40525 121 aaKnown RBP6.21□□□□□ -1.42
SRP40YKR092C YNL108CP53929 270 aa6.21□□□□□ -1.42
SRP40YKR092C YDL176WQ12027 708 aa6.21□□□□□ -1.42
SRP40YKR092C MRT4P33201 236 aaKnown RBP6.2□□□□□ -1.42
SRP40YKR092C PTK2P47116 818 aaKnown RBP6.2□□□□□ -1.42
SRP40YKR092C TIF1P10081 395 aaKnown RBP6.19□□□□□ -1.42
SRP40YKR092C SPT5P27692 1063 aaKnown RBP6.19□□□□□ -1.42
SRP40YKR092C SRF1Q12516 437 aa6.19□□□□□ -1.42
SRP40YKR092C YDJ1P25491 409 aaKnown RBP6.18□□□□□ -1.42
SRP40YKR092C VAC17P25591 423 aa6.18□□□□□ -1.42
SRP40YKR092C ITT1Q04638 464 aa6.17□□□□□ -1.42
SRP40YKR092C SUP45P12385 437 aaKnown RBP6.16□□□□□ -1.42
SRP40YKR092C RTG2P32608 588 aaKnown RBP6.16□□□□□ -1.42
SRP40YKR092C OPT2Q06593 877 aa6.16□□□□□ -1.42
SRP40YKR092C NAF1P53919 492 aaKnown RBP6.15□□□□□ -1.42
SRP40YKR092C CAF120P53836 1060 aa6.13□□□□□ -1.43
SRP40YKR092C APP1P53933 587 aa6.13□□□□□ -1.43
SRP40YKR092C YPR204WQ08995 1032 aa6.13□□□□□ -1.43
SRP40YKR092C ENO2P00925 437 aaKnown RBP6.12□□□□□ -1.43
SRP40YKR092C NUP85P46673 744 aa6.12□□□□□ -1.43
SRP40YKR092C YLR346CQ06139 101 aa6.12□□□□□ -1.43
SRP40YKR092C TEC1P18412 486 aa6.11□□□□□ -1.43
SRP40YKR092C YBL086CP38177 466 aa6.11□□□□□ -1.43
SRP40YKR092C ACO2P39533 789 aa6.11□□□□□ -1.43
SRP40YKR092C RTT106P40161 455 aa6.11□□□□□ -1.43
SRP40YKR092C YPP1P46951 817 aa6.11□□□□□ -1.43
SRP40YKR092C FIG4P42837 879 aa6.1□□□□□ -1.43
SRP40YKR092C GUT2P32191 649 aa6.09□□□□□ -1.43
SRP40YKR092C AAD14P42884 376 aa6.09□□□□□ -1.43
SRP40YKR092C ARG82P07250 355 aa6.08□□□□□ -1.44
SRP40YKR092C ISF1P32488 338 aa6.08□□□□□ -1.44
SRP40YKR092C GLY1P37303 387 aaKnown RBP6.08□□□□□ -1.44
SRP40YKR092C EMW1P42842 904 aaKnown RBP6.08□□□□□ -1.44
SRP40YKR092C RIM21P48565 533 aa6.08□□□□□ -1.44
SRP40YKR092C STE20Q03497 939 aaKnown RBP6.08□□□□□ -1.44
SRP40YKR092C MCM16Q12262 181 aa6.08□□□□□ -1.44
SRP40YKR092C ENO1P00924 437 aaKnown RBP6.07□□□□□ -1.44
SRP40YKR092C MIP1P15801 1254 aa6.07□□□□□ -1.44
SRP40YKR092C EMP47P43555 445 aa6.07□□□□□ -1.44
SRP40YKR092C SCW11P53189 542 aa6.07□□□□□ -1.44
SRP40YKR092C MRX10Q05648 414 aa6.06□□□□□ -1.44
SRP40YKR092C YPR084WQ06821 456 aa6.06□□□□□ -1.44
SRP40YKR092C TY1A-BLQ12266 440 aa6.06□□□□□ -1.44
SRP40YKR092C DLD1P32891 587 aa6.05□□□□□ -1.44
SRP40YKR092C TTI1P36097 1038 aa6.05□□□□□ -1.44
SRP40YKR092C YIR007WP40566 764 aa6.05□□□□□ -1.44
SRP40YKR092C LSC2P53312 427 aa6.05□□□□□ -1.44
SRP40YKR092C FRA1Q07825 749 aa6.05□□□□□ -1.44
SRP40YKR092C SSA4P22202 642 aaKnown RBP6.04□□□□□ -1.44
SRP40YKR092C MRX12P47084 519 aa6.04□□□□□ -1.44
SRP40YKR092C CPS1P27614 576 aa6.03□□□□□ -1.44
SRP40YKR092C MKS1P34072 584 aa6.03□□□□□ -1.44
SRP40YKR092C SIS2P36024 562 aa6.03□□□□□ -1.44
SRP40YKR092C YJR098CP47139 656 aa6.03□□□□□ -1.44
SRP40YKR092C UBP2Q01476 1272 aa6.02□□□□□ -1.45
SRP40YKR092C DFG5Q05031 458 aa6.02□□□□□ -1.45
SRP40YKR092C SUB2Q07478 446 aaKnown RBP6.02□□□□□ -1.45
SRP40YKR092C RDS2P19541 446 aaKnown RBP6□□□□□ -1.45
SRP40YKR092C ATG3P40344 310 aa6□□□□□ -1.45
SRP40YKR092C TCB1Q12466 1186 aa6□□□□□ -1.45
SRP40YKR092C YGR035CP53222 116 aa5.99□□□□□ -1.45
SRP40YKR092C PEP12P32854 288 aa5.98□□□□□ -1.45
SRP40YKR092C BDS1Q08347 646 aa5.98□□□□□ -1.45
SRP40YKR092C FBP26P32604 452 aa5.97□□□□□ -1.45
SRP40YKR092C TGL4P36165 910 aa5.97□□□□□ -1.45
SRP40YKR092C SOH1P38633 127 aa5.97□□□□□ -1.45
SRP40YKR092C KTR7P40504 517 aa5.97□□□□□ -1.45
SRP40YKR092C APL6P46682 809 aa5.97□□□□□ -1.45
SRP40YKR092C HPF1Q05164 967 aa5.97□□□□□ -1.45
SRP40YKR092C UTP13Q05946 817 aaKnown RBP5.97□□□□□ -1.45
SRP40YKR092C ATG20Q07528 640 aa5.97□□□□□ -1.45
SRP40YKR092C TRK2P28584 889 aa5.96□□□□□ -1.46
SRP40YKR092C OSH7P38755 437 aa5.95□□□□□ -1.46
SRP40YKR092C ISR1Q06098 443 aaKnown RBP5.95□□□□□ -1.46
SRP40YKR092C STE6P12866 1290 aa5.94□□□□□ -1.46
SRP40YKR092C PUP1P25043 261 aa5.94□□□□□ -1.46
SRP40YKR092C ROG3P43602 733 aa5.94□□□□□ -1.46
SRP40YKR092C NOB1Q08444 459 aaKnown RBP5.94□□□□□ -1.46
SRP40YKR092C SSA1P10591 642 aaKnown RBP5.93□□□□□ -1.46
SRP40YKR092C TY1A-MR1Q04215 440 aa5.93□□□□□ -1.46
SRP40YKR092C ECM23Q02710 187 aa5.92□□□□□ -1.46
SRP40YKR092C GAL2P13181 574 aa5.91□□□□□ -1.46
SRP40YKR092C HAL5P38970 855 aaKnown RBP5.91□□□□□ -1.46
SRP40YKR092C ISU1Q03020 165 aa5.91□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms