RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.4	□□□□□ -1.38	not detected
SIS2	YKR072C	CWC15	Q03772	175 aa	Known RBP	6.4	□□□□□ -1.38
SIS2	YKR072C	EAP1	P36041	632 aa	Known RBP	6.39	□□□□□ -1.39
SIS2	YKR072C	TPS3	P38426	1054 aa	Known RBP	6.39	□□□□□ -1.39
SIS2	YKR072C	ATG1	P53104	897 aa		6.39	□□□□□ -1.39
SIS2	YKR072C	ALD3	P54114	506 aa		6.39	□□□□□ -1.39
SIS2	YKR072C	GUT1	P32190	709 aa		6.39	□□□□□ -1.39
SIS2	YKR072C	YJL049W	P47048	450 aa		6.39	□□□□□ -1.39
SIS2	YKR072C	YGL081W	P53156	320 aa		6.39	□□□□□ -1.39
SIS2	YKR072C	MSB4	Q12317	492 aa		6.39	□□□□□ -1.39
SIS2	YKR072C	PMC1	P38929	1173 aa	Predicted RBP	6.38	□□□□□ -1.39
SIS2	YKR072C	MVP1	P40959	511 aa	Known RBP	6.38	□□□□□ -1.39
SIS2	YKR072C	ALD6	P54115	500 aa	Known RBP	6.38	□□□□□ -1.39
SIS2	YKR072C	SEC61	P32915	480 aa		6.37	□□□□□ -1.39
SIS2	YKR072C	MAD1	P40957	749 aa		6.37	□□□□□ -1.39
SIS2	YKR072C	RPN4	Q03465	531 aa		6.37	□□□□□ -1.39
SIS2	YKR072C	PUF6	Q04373	656 aa	Known RBP	6.37	□□□□□ -1.39
SIS2	YKR072C	NSE3	Q05541	303 aa		6.37	□□□□□ -1.39
SIS2	YKR072C	YOL057W	Q08225	711 aa		6.37	□□□□□ -1.39
SIS2	YKR072C	GRE2	Q12068	342 aa	Known RBP	6.37	□□□□□ -1.39
SIS2	YKR072C	MNL2	Q12205	849 aa		6.37	□□□□□ -1.39
SIS2	YKR072C	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.36	□□□□□ -1.39	not detected
SIS2	YKR072C	RDS2	P19541	446 aa	Known RBP	6.36	□□□□□ -1.39
SIS2	YKR072C	GRX4	P32642	244 aa		6.36	□□□□□ -1.39
SIS2	YKR072C	NUT2	Q06213	157 aa		6.36	□□□□□ -1.39
SIS2	YKR072C	WRS1	Q12109	432 aa	Known RBP	6.36	□□□□□ -1.39
SIS2	YKR072C	YGR161W-C	Q3E744	92 aa		6.36	□□□□□ -1.39
SIS2	YKR072C	MNN4	P36044	1178 aa		6.35	□□□□□ -1.39
SIS2	YKR072C	RSC30	P38781	883 aa		6.35	□□□□□ -1.39
SIS2	YKR072C	NAF1	P53919	492 aa	Known RBP	6.35	□□□□□ -1.39
SIS2	YKR072C	CHL1	P22516	861 aa	Predicted RBP	6.34	□□□□□ -1.39
SIS2	YKR072C	PNP1	Q05788	311 aa		6.34	□□□□□ -1.39
SIS2	YKR072C	YOR131C	Q12486	218 aa		6.34	□□□□□ -1.39
SIS2	YKR072C	CLN2	P20438	545 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	SIT4	P20604	311 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	MET4	P32389	672 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	ACF4	P47129	309 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	YNL035C	P53962	389 aa	Known RBP	6.33	□□□□□ -1.4
SIS2	YKR072C	VPS16	Q03308	798 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	ENV9	Q08651	330 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	CDC53	Q12018	815 aa	Known RBP	6.33	□□□□□ -1.4
SIS2	YKR072C	PIN2	Q12057	282 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	FUR4	P05316	633 aa	Known RBP	6.33	□□□□□ -1.4
SIS2	YKR072C	BOL3	P39724	118 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	BUD6	P41697	788 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	SSF2	Q12153	453 aa	Predicted RBP	6.33	□□□□□ -1.4
SIS2	YKR072C	MCM16	Q12262	181 aa		6.33	□□□□□ -1.4
SIS2	YKR072C	TRP5	P00931	707 aa	Known RBP	6.32	□□□□□ -1.4
SIS2	YKR072C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.32	□□□□□ -1.4	not detected
SIS2	YKR072C	FYV10	P40492	516 aa		6.32	□□□□□ -1.4
SIS2	YKR072C	FRT1	Q99332	602 aa		6.32	□□□□□ -1.4
SIS2	YKR072C	SPT2	P06843	333 aa	Predicted RBP	6.31	□□□□□ -1.4
SIS2	YKR072C	GLO3	P38682	493 aa	Known RBP	6.31	□□□□□ -1.4
SIS2	YKR072C	MNN1	P39106	762 aa		6.31	□□□□□ -1.4
SIS2	YKR072C	QDR1	P40475	563 aa		6.31	□□□□□ -1.4
SIS2	YKR072C	UTP14	Q04500	899 aa	Known RBP	6.31	□□□□□ -1.4
SIS2	YKR072C	YPR109W	Q06104	294 aa		6.31	□□□□□ -1.4
SIS2	YKR072C	YDL121C	Q07541	149 aa		6.31	□□□□□ -1.4
SIS2	YKR072C	RMD1	Q03441	430 aa		6.3	□□□□□ -1.4
SIS2	YKR072C	MET6	P05694	767 aa	Known RBP	6.3	□□□□□ -1.4
SIS2	YKR072C	PHO87	P25360	923 aa		6.3	□□□□□ -1.4
SIS2	YKR072C	GRX7	P38068	203 aa		6.3	□□□□□ -1.4
SIS2	YKR072C	XDJ1	P39102	459 aa		6.3	□□□□□ -1.4
SIS2	YKR072C	TY4A-J	P47023	414 aa		6.3	□□□□□ -1.4
SIS2	YKR072C	CSC1	Q06538	782 aa		6.3	□□□□□ -1.4
SIS2	YKR072C	KAR1	P11927	433 aa		6.29	□□□□□ -1.4
SIS2	YKR072C	SRS2	P12954	1174 aa		6.29	□□□□□ -1.4
SIS2	YKR072C	VMA1	P17255	1071 aa	Known RBP	6.29	□□□□□ -1.4
SIS2	YKR072C	YJR142W	P47173	342 aa		6.29	□□□□□ -1.4
SIS2	YKR072C	KIP3	P53086	805 aa	Known RBP	6.29	□□□□□ -1.4
SIS2	YKR072C	PUN1	Q06991	263 aa		6.29	□□□□□ -1.4
SIS2	YKR072C	HAP4	P14064	554 aa		6.28	□□□□□ -1.4
SIS2	YKR072C	MIP1	P15801	1254 aa		6.28	□□□□□ -1.4
SIS2	YKR072C	GAP1	P19145	602 aa	Predicted RBP	6.28	□□□□□ -1.4
SIS2	YKR072C	GAL11	P19659	1081 aa		6.28	□□□□□ -1.4
SIS2	YKR072C	SOL3	P38858	249 aa		6.28	□□□□□ -1.4
SIS2	YKR072C	ECM16	Q04217	1267 aa	Known RBP	6.28	□□□□□ -1.4
SIS2	YKR072C	TMA64	Q04600	565 aa	Known RBP	6.28	□□□□□ -1.4
SIS2	YKR072C	BRE1	Q07457	700 aa	Known RBP	6.28	□□□□□ -1.4
SIS2	YKR072C	VMA4	P22203	233 aa	Known RBP	6.27	□□□□□ -1.41
SIS2	YKR072C	SLY41	P22215	453 aa		6.27	□□□□□ -1.41
SIS2	YKR072C	BOI2	P39969	1040 aa		6.27	□□□□□ -1.41
SIS2	YKR072C	RTT106	P40161	455 aa		6.27	□□□□□ -1.41
SIS2	YKR072C	MSH4	P40965	878 aa	Predicted RBP	6.27	□□□□□ -1.41
SIS2	YKR072C	EMP47	P43555	445 aa		6.27	□□□□□ -1.41
SIS2	YKR072C	BDF2	Q07442	638 aa		6.27	□□□□□ -1.41
SIS2	YKR072C	RPP1B	P10622	106 aa	Known RBP	6.26	□□□□□ -1.41
SIS2	YKR072C	UBP12	P39538	1254 aa		6.26	□□□□□ -1.41
SIS2	YKR072C	CEF1	Q03654	590 aa	Predicted RBP	6.26	□□□□□ -1.41
SIS2	YKR072C	MON2	P48563	1636 aa	Predicted RBP	6.26	□□□□□ -1.41
SIS2	YKR072C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
SIS2	YKR072C	MCM2	P29469	868 aa		6.26	□□□□□ -1.41
SIS2	YKR072C	SAP30	P38429	201 aa		6.26	□□□□□ -1.41
SIS2	YKR072C	SPR28	Q04921	423 aa		6.26	□□□□□ -1.41
SIS2	YKR072C	ESF1	Q06344	628 aa	Known RBP	6.26	□□□□□ -1.41
SIS2	YKR072C	ISF1	P32488	338 aa		6.25	□□□□□ -1.41
SIS2	YKR072C	PRE3	P38624	215 aa		6.25	□□□□□ -1.41
SIS2	YKR072C	ERP2	P39704	215 aa		6.25	□□□□□ -1.41
SIS2	YKR072C	ROM1	P53046	1155 aa		6.25	□□□□□ -1.41
SIS2	YKR072C	YOL036W	Q08206	761 aa		6.25	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms