RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C ARG8P18544 423 aa2.64□□□□□ -1.99
RTT101YJL047C MET4P32389 672 aa2.64□□□□□ -1.99
RTT101YJL047C GRX4P32642 244 aa2.64□□□□□ -1.99
RTT101YJL047C BCK2P33306 851 aa2.64□□□□□ -1.99
RTT101YJL047C RPA135P22138 1203 aaKnown RBP2.64□□□□□ -1.99
RTT101YJL047C SPT5P27692 1063 aaKnown RBP2.64□□□□□ -1.99
RTT101YJL047C ILV3P39522 585 aaKnown RBP2.64□□□□□ -1.99
RTT101YJL047C SET4P42948 560 aa2.64□□□□□ -1.99
RTT101YJL047C DAN4P47179 1161 aa2.64□□□□□ -1.99
RTT101YJL047C YGR273CP53329 174 aa2.64□□□□□ -1.99
RTT101YJL047C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99 RIP-Chip
RTT101YJL047C NUT2Q06213 157 aa2.64□□□□□ -1.99
RTT101YJL047C PBP2P38151 413 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
RTT101YJL047C RSC30P38781 883 aa2.63□□□□□ -1.99
RTT101YJL047C BUD6P41697 788 aa2.63□□□□□ -1.99
RTT101YJL047C TFG1P41895 735 aaPredicted RBP2.63□□□□□ -1.99
RTT101YJL047C YMR196WQ04336 1088 aa2.63□□□□□ -1.99
RTT101YJL047C NSE3Q05541 303 aa2.63□□□□□ -1.99
RTT101YJL047C GAL2P13181 574 aa2.63□□□□□ -1.99
RTT101YJL047C MCM2P29469 868 aa2.63□□□□□ -1.99
RTT101YJL047C GTT3P39996 337 aa2.63□□□□□ -1.99
RTT101YJL047C YJR142WP47173 342 aa2.63□□□□□ -1.99
RTT101YJL047C ATG1P53104 897 aa2.63□□□□□ -1.99
RTT101YJL047C VPS16Q03308 798 aa2.63□□□□□ -1.99
RTT101YJL047C RPN4Q03465 531 aa2.63□□□□□ -1.99
RTT101YJL047C SSF2Q12153 453 aaPredicted RBP2.63□□□□□ -1.99
RTT101YJL047C NAB3P38996 802 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
RTT101YJL047C MVP1P40959 511 aaKnown RBP2.62□□□□□ -1.99
RTT101YJL047C SPR28Q04921 423 aa2.62□□□□□ -1.99
RTT101YJL047C GAL11P19659 1081 aa2.62□□□□□ -1.99
RTT101YJL047C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
RTT101YJL047C RTG1P32607 177 aa2.62□□□□□ -1.99
RTT101YJL047C MTO1P53070 669 aa2.62□□□□□ -1.99
RTT101YJL047C POB3Q04636 552 aaKnown RBP2.62□□□□□ -1.99
RTT101YJL047C TRP5P00931 707 aaKnown RBP2.61□□□□□ -1.99
RTT101YJL047C CLB5P30283 435 aa2.61□□□□□ -1.99
RTT101YJL047C ISF1P32488 338 aa2.61□□□□□ -1.99
RTT101YJL047C MGE1P38523 228 aa2.61□□□□□ -1.99
RTT101YJL047C AIM21P40563 679 aa2.61□□□□□ -1.99
RTT101YJL047C ATH1P48016 1211 aa2.61□□□□□ -1.99
RTT101YJL047C YDL121CQ07541 149 aa2.61□□□□□ -1.99
RTT101YJL047C NCR1Q12200 1170 aa2.61□□□□□ -1.99
RTT101YJL047C MSB4Q12317 492 aa2.61□□□□□ -1.99
RTT101YJL047C GAP1P19145 602 aaPredicted RBP2.61□□□□□ -1.99
RTT101YJL047C GUT1P32190 709 aa2.61□□□□□ -1.99
RTT101YJL047C MNN1P39106 762 aa2.61□□□□□ -1.99
RTT101YJL047C QDR1P40475 563 aa2.61□□□□□ -1.99
RTT101YJL047C ECM16Q04217 1267 aaKnown RBP2.61□□□□□ -1.99
RTT101YJL047C PUF6Q04373 656 aaKnown RBP2.61□□□□□ -1.99
RTT101YJL047C YDR344CQ05510 147 aa2.61□□□□□ -1.99
RTT101YJL047C PNP1Q05788 311 aa2.61□□□□□ -1.99
RTT101YJL047C PIN2Q12057 282 aa2.61□□□□□ -1.99
RTT101YJL047C MCM16Q12262 181 aa2.61□□□□□ -1.99
RTT101YJL047C GYP5Q12344 894 aa2.61□□□□□ -1.99
RTT101YJL047C SIT4P20604 311 aa2.6□□□□□ -1.99
RTT101YJL047C ISW1P38144 1129 aa2.6□□□□□ -1.99
RTT101YJL047C GLO3P38682 493 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C UBP12P39538 1254 aa2.6□□□□□ -1.99
RTT101YJL047C KIP3P53086 805 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C DNM1P54861 757 aa2.6□□□□□ -1.99
RTT101YJL047C YPR109WQ06104 294 aa2.6□□□□□ -1.99
RTT101YJL047C BDF2Q07442 638 aa2.6□□□□□ -1.99
RTT101YJL047C BRE1Q07457 700 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C CDC53Q12018 815 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C ENP1P38333 483 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C KRI1P42846 591 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C ROM1P53046 1155 aa2.6□□□□□ -1.99
RTT101YJL047C GRE2Q12068 342 aaKnown RBP2.6□□□□□ -1.99
RTT101YJL047C MIP1P15801 1254 aa2.59□□□□□ -1.99
RTT101YJL047C SEC6P32844 805 aa2.59□□□□□ -1.99
RTT101YJL047C MPE1P35728 441 aaKnown RBP2.59□□□□□ -1.99
RTT101YJL047C TAT2P38967 592 aa2.59□□□□□ -1.99
RTT101YJL047C YEL023CP39992 682 aa2.59□□□□□ -1.99
RTT101YJL047C YEN1P40028 759 aa2.59□□□□□ -1.99
RTT101YJL047C MAD1P40957 749 aa2.59□□□□□ -1.99
RTT101YJL047C GPI13Q07830 1017 aa2.59□□□□□ -1.99
RTT101YJL047C STI1P15705 589 aaKnown RBP RIP-Chip data2.59□□□□□ -2not detected
RTT101YJL047C VMA4P22203 233 aaKnown RBP2.59□□□□□ -2
RTT101YJL047C DCW1P36091 449 aa2.59□□□□□ -2
RTT101YJL047C BOI1P38041 980 aaKnown RBP2.59□□□□□ -2
RTT101YJL047C FUI1P38196 639 aa2.59□□□□□ -2
RTT101YJL047C YPP1P46951 817 aa2.59□□□□□ -2
RTT101YJL047C TY4A-JP47023 414 aa2.59□□□□□ -2
RTT101YJL047C ACS2P52910 683 aaKnown RBP2.59□□□□□ -2
RTT101YJL047C SVL3Q03088 825 aaKnown RBP2.59□□□□□ -2
RTT101YJL047C PPM2Q08282 695 aa2.59□□□□□ -2
RTT101YJL047C YGR161W-CQ3E744 92 aa2.59□□□□□ -2
RTT101YJL047C BOI2P39969 1040 aa2.58□□□□□ -2
RTT101YJL047C PHO87P25360 923 aa2.58□□□□□ -2
RTT101YJL047C TIM23P32897 222 aa2.58□□□□□ -2
RTT101YJL047C RPT1P33299 467 aaKnown RBP2.58□□□□□ -2
RTT101YJL047C GRX7P38068 203 aa2.58□□□□□ -2
RTT101YJL047C ERP2P39704 215 aa2.58□□□□□ -2
RTT101YJL047C EMP47P43555 445 aa2.58□□□□□ -2
RTT101YJL047C YJL049WP47048 450 aa2.58□□□□□ -2
RTT101YJL047C ACF4P47129 309 aa2.58□□□□□ -2
RTT101YJL047C RTF1P53064 558 aa2.58□□□□□ -2
RTT101YJL047C WRS1Q12109 432 aaKnown RBP2.58□□□□□ -2
RTT101YJL047C FUR4P05316 633 aaKnown RBP2.57□□□□□ -2
RTT101YJL047C SLY41P22215 453 aa2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms