RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W KTR1P27810 393 aaKnown RBP6.58□□□□□ -1.36
NMD3YHR170W HAP5Q02516 242 aa6.58□□□□□ -1.36
NMD3YHR170W SSM4P40318 1319 aa6.57□□□□□ -1.36
NMD3YHR170W ARO1P08566 1588 aaKnown RBP6.57□□□□□ -1.36
NMD3YHR170W CAT8P39113 1433 aa6.57□□□□□ -1.36
NMD3YHR170W CSN12P47130 423 aa6.57□□□□□ -1.36
NMD3YHR170W FPK1P53739 893 aa6.57□□□□□ -1.36
NMD3YHR170W TYW1Q08960 810 aaKnown RBP6.57□□□□□ -1.36
NMD3YHR170W SIT4P20604 311 aa6.56□□□□□ -1.36
NMD3YHR170W BMT6Q12291 365 aa6.56□□□□□ -1.36
NMD3YHR170W SCJ1P25303 377 aa6.55□□□□□ -1.36
NMD3YHR170W LTE1P07866 1435 aa6.55□□□□□ -1.36
NMD3YHR170W RAM1P22007 431 aa6.53□□□□□ -1.36
NMD3YHR170W HPC2Q01448 625 aa6.53□□□□□ -1.36
NMD3YHR170W ELP4Q02884 456 aaKnown RBP6.53□□□□□ -1.36
NMD3YHR170W BNI1P41832 1953 aa6.53□□□□□ -1.36
NMD3YHR170W YJL171CP46992 396 aa6.52□□□□□ -1.36
NMD3YHR170W HST2P53686 357 aa6.52□□□□□ -1.36
NMD3YHR170W NUD1P32336 851 aa6.52□□□□□ -1.37
NMD3YHR170W BNI4P53858 892 aa6.52□□□□□ -1.37
NMD3YHR170W ERF2Q06551 359 aa6.52□□□□□ -1.37
NMD3YHR170W IQG1Q12280 1495 aa6.51□□□□□ -1.37
NMD3YHR170W PRE3P38624 215 aa6.51□□□□□ -1.37
NMD3YHR170W STR2P47164 639 aa6.51□□□□□ -1.37
NMD3YHR170W ISM1P48526 1002 aa6.51□□□□□ -1.37
NMD3YHR170W TFB3Q03290 321 aa6.51□□□□□ -1.37
NMD3YHR170W YPR015CQ12531 247 aa6.51□□□□□ -1.37
NMD3YHR170W DOP1Q03921 1698 aa6.51□□□□□ -1.37
NMD3YHR170W SPT23P35210 1082 aa6.5□□□□□ -1.37
NMD3YHR170W YMR196WQ04336 1088 aa6.5□□□□□ -1.37
NMD3YHR170W ESS1P22696 170 aa6.49□□□□□ -1.37
NMD3YHR170W GLN1P32288 370 aaKnown RBP6.49□□□□□ -1.37
NMD3YHR170W MMP1Q12372 583 aa6.49□□□□□ -1.37
NMD3YHR170W KEX2P13134 814 aa6.48□□□□□ -1.37
NMD3YHR170W PKC1P24583 1151 aa6.48□□□□□ -1.37
NMD3YHR170W SRB8P25648 1427 aa6.48□□□□□ -1.37
NMD3YHR170W YSP2Q06681 1438 aa6.48□□□□□ -1.37
NMD3YHR170W SEC7P11075 2009 aaKnown RBP6.48□□□□□ -1.37
NMD3YHR170W SSA2P10592 639 aaKnown RBP6.48□□□□□ -1.37
NMD3YHR170W ITT1Q04638 464 aa6.48□□□□□ -1.37
NMD3YHR170W DRS2P39524 1355 aa6.47□□□□□ -1.37
NMD3YHR170W CHL1P22516 861 aaPredicted RBP6.47□□□□□ -1.37
NMD3YHR170W YJU3P28321 313 aa6.47□□□□□ -1.37
NMD3YHR170W YNL115CP53925 644 aa6.47□□□□□ -1.37
NMD3YHR170W BUD20Q08004 166 aaPredicted RBP6.47□□□□□ -1.37
NMD3YHR170W TY1A-DR4O74302 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-HP0C2I4 478 aaKnown RBP6.46□□□□□ -1.38
NMD3YHR170W TY1A-AP0CX57 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-PR1P0CX58 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-ORP0CX59 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-PR2P0CX60 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-DR5P0CX65 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-ER2P0CX66 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-GR3P0CX67 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-LR1P0CX68 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-MR2P0CX69 440 aa6.46□□□□□ -1.38
NMD3YHR170W SEC2P17065 759 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-JR2P47099 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-DR1Q03856 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-ML1Q04706 440 aaKnown RBP6.46□□□□□ -1.38
NMD3YHR170W TY1A-BRQ12217 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-NL2Q12470 440 aa6.46□□□□□ -1.38
NMD3YHR170W TY1A-GR2Q12485 440 aa6.46□□□□□ -1.38
NMD3YHR170W PTC2P39966 464 aaKnown RBP6.45□□□□□ -1.38
NMD3YHR170W RTF1P53064 558 aa6.45□□□□□ -1.38
NMD3YHR170W YML082WQ04533 649 aaKnown RBP6.45□□□□□ -1.38
NMD3YHR170W CHC1P22137 1653 aaKnown RBP6.45□□□□□ -1.38
NMD3YHR170W SLY41P22215 453 aa6.44□□□□□ -1.38
NMD3YHR170W PKH3Q03306 898 aaPredicted RBP6.44□□□□□ -1.38
NMD3YHR170W NPL4P33755 580 aa6.43□□□□□ -1.38
NMD3YHR170W RSC30P38781 883 aa6.43□□□□□ -1.38
NMD3YHR170W RAD59Q12223 238 aa6.43□□□□□ -1.38
NMD3YHR170W GCD11P32481 527 aaKnown RBP6.42□□□□□ -1.38
NMD3YHR170W BRL1P38770 471 aa6.42□□□□□ -1.38
NMD3YHR170W AGE1Q04412 482 aa6.41□□□□□ -1.38
NMD3YHR170W BNR1P40450 1375 aa6.41□□□□□ -1.38
NMD3YHR170W BUD21Q08492 214 aaPredicted RBP6.4□□□□□ -1.38
NMD3YHR170W GCN2P15442 1659 aa6.4□□□□□ -1.38
NMD3YHR170W MMS1Q06211 1407 aa6.4□□□□□ -1.39
NMD3YHR170W TRM3Q07527 1436 aa6.4□□□□□ -1.39
NMD3YHR170W HGH1P48362 394 aaKnown RBP6.39□□□□□ -1.39
NMD3YHR170W PRT1P06103 763 aaKnown RBP6.38□□□□□ -1.39
NMD3YHR170W TRM1P15565 570 aaKnown RBP6.38□□□□□ -1.39
NMD3YHR170W ARG8P18544 423 aa6.38□□□□□ -1.39
NMD3YHR170W TUB4P53378 473 aa6.38□□□□□ -1.39
NMD3YHR170W DNF2Q12675 1612 aa6.37□□□□□ -1.39
NMD3YHR170W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
NMD3YHR170W PUS6P53294 404 aa6.36□□□□□ -1.39
NMD3YHR170W YOR093CQ12275 1648 aa6.36□□□□□ -1.39
NMD3YHR170W YJL007CP47080 104 aa6.35□□□□□ -1.39
NMD3YHR170W LAM6Q08001 693 aa6.35□□□□□ -1.39
NMD3YHR170W VMR1P38735 1592 aa6.35□□□□□ -1.39
NMD3YHR170W BIM1P40013 344 aa6.35□□□□□ -1.39
NMD3YHR170W YBL036CP38197 257 aa6.34□□□□□ -1.39
NMD3YHR170W PAC1P39946 494 aaKnown RBP6.34□□□□□ -1.39
NMD3YHR170W ATG32P40458 529 aa6.34□□□□□ -1.39
NMD3YHR170W BIO2P32451 375 aa6.33□□□□□ -1.4
NMD3YHR170W VRP1P37370 817 aa6.33□□□□□ -1.4
NMD3YHR170W RLF2Q12495 606 aa6.33□□□□□ -1.4
NMD3YHR170W NUP188P52593 1655 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 77.5 ms