RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	DPS1	P04802	557 aa	Known RBP	6.27	□□□□□ -1.41
VMA22	YHR060W	HEM3	P28789	327 aa		6.27	□□□□□ -1.41
VMA22	YHR060W	RRD1	P40454	393 aa	Known RBP	6.27	□□□□□ -1.41
VMA22	YHR060W	SIS2	P36024	562 aa		6.26	□□□□□ -1.41
VMA22	YHR060W	MET10	P39692	1035 aa		6.26	□□□□□ -1.41
VMA22	YHR060W	NAF1	P53919	492 aa	Known RBP	6.26	□□□□□ -1.41
VMA22	YHR060W	CPS1	P27614	576 aa		6.25	□□□□□ -1.41
VMA22	YHR060W	RTG2	P32608	588 aa	Known RBP	6.25	□□□□□ -1.41
VMA22	YHR060W	BDP1	P46678	594 aa		6.25	□□□□□ -1.41
VMA22	YHR060W	YPR204W	Q08995	1032 aa		6.25	□□□□□ -1.41
VMA22	YHR060W	TTI1	P36097	1038 aa		6.24	□□□□□ -1.41
VMA22	YHR060W	CST6	P40535	587 aa		6.24	□□□□□ -1.41
VMA22	YHR060W	FRK1	Q03002	865 aa	Predicted RBP	6.24	□□□□□ -1.41
VMA22	YHR060W	SSF1	P38789	453 aa	Predicted RBP	6.23	□□□□□ -1.41
VMA22	YHR060W	ASF1	P32447	279 aa		6.22	□□□□□ -1.41
VMA22	YHR060W	SYH1	Q02875	849 aa	Known RBP	6.22	□□□□□ -1.41
VMA22	YHR060W	RAS1	P01119	309 aa		6.21	□□□□□ -1.42
VMA22	YHR060W	YPP1	P46951	817 aa		6.21	□□□□□ -1.42
VMA22	YHR060W	TEC1	P18412	486 aa		6.2	□□□□□ -1.42
VMA22	YHR060W	VAC17	P25591	423 aa		6.2	□□□□□ -1.42
VMA22	YHR060W	KIP2	P28743	706 aa		6.2	□□□□□ -1.42
VMA22	YHR060W	HED1	Q03937	162 aa		6.2	□□□□□ -1.42
VMA22	YHR060W	IOC4	Q04213	475 aa		6.2	□□□□□ -1.42
VMA22	YHR060W	GUT2	P32191	649 aa		6.19	□□□□□ -1.42
VMA22	YHR060W	BIO2	P32451	375 aa		6.19	□□□□□ -1.42
VMA22	YHR060W	FIG4	P42837	879 aa		6.19	□□□□□ -1.42
VMA22	YHR060W	SUP45	P12385	437 aa	Known RBP	6.18	□□□□□ -1.42
VMA22	YHR060W	IXR1	P33417	597 aa		6.18	□□□□□ -1.42
VMA22	YHR060W	YNL108C	P53929	270 aa		6.18	□□□□□ -1.42
VMA22	YHR060W	PUS5	Q06244	254 aa		6.18	□□□□□ -1.42
VMA22	YHR060W	NOB1	Q08444	459 aa	Known RBP	6.18	□□□□□ -1.42
VMA22	YHR060W	RRN6	P32786	894 aa		6.17	□□□□□ -1.42
VMA22	YHR060W	YDJ1	P25491	409 aa	Known RBP	6.16	□□□□□ -1.42
VMA22	YHR060W	PAM1	P37304	830 aa	Known RBP	6.16	□□□□□ -1.42
VMA22	YHR060W	STM1	P39015	273 aa	Known RBP	6.16	□□□□□ -1.42
VMA22	YHR060W	SEN54	Q02825	467 aa	Predicted RBP	6.16	□□□□□ -1.42
VMA22	YHR060W	STE20	Q03497	939 aa	Known RBP	6.16	□□□□□ -1.42
VMA22	YHR060W	HAT1	Q12341	374 aa		6.16	□□□□□ -1.42
VMA22	YHR060W	SEC20	P28791	383 aa		6.15	□□□□□ -1.42
VMA22	YHR060W	CDC4	P07834	779 aa		6.14	□□□□□ -1.43
VMA22	YHR060W	RTT106	P40161	455 aa		6.14	□□□□□ -1.43
VMA22	YHR060W	ATG3	P40344	310 aa		6.14	□□□□□ -1.43
VMA22	YHR060W	ITT1	Q04638	464 aa		6.14	□□□□□ -1.43
VMA22	YHR060W	FRA1	Q07825	749 aa		6.14	□□□□□ -1.43
VMA22	YHR060W	MCM16	Q12262	181 aa		6.14	□□□□□ -1.43
VMA22	YHR060W	YPR084W	Q06821	456 aa		6.13	□□□□□ -1.43
VMA22	YHR060W	ENO2	P00925	437 aa	Known RBP	6.12	□□□□□ -1.43
VMA22	YHR060W	PUP1	P25043	261 aa		6.12	□□□□□ -1.43
VMA22	YHR060W	MRT4	P33201	236 aa	Known RBP	6.11	□□□□□ -1.43
VMA22	YHR060W	EMP47	P43555	445 aa		6.11	□□□□□ -1.43
VMA22	YHR060W	RIM21	P48565	533 aa		6.1	□□□□□ -1.43
VMA22	YHR060W	ENO1	P00924	437 aa	Known RBP	6.09	□□□□□ -1.43
VMA22	YHR060W	TRK1	P12685	1235 aa		6.09	□□□□□ -1.43
VMA22	YHR060W	TGL4	P36165	910 aa		6.09	□□□□□ -1.43
VMA22	YHR060W	EMW1	P42842	904 aa	Known RBP	6.09	□□□□□ -1.43
VMA22	YHR060W	CLA4	P48562	842 aa		6.09	□□□□□ -1.43
VMA22	YHR060W	HST3	P53687	447 aa		6.09	□□□□□ -1.43
VMA22	YHR060W	YML083C	Q04526	418 aa		6.09	□□□□□ -1.43
VMA22	YHR060W	UTP13	Q05946	817 aa	Known RBP	6.09	□□□□□ -1.43
VMA22	YHR060W	YTA7	P40340	1379 aa		6.08	□□□□□ -1.44
VMA22	YHR060W	AIR1	P40507	360 aa	Known RBP	6.08	□□□□□ -1.44
VMA22	YHR060W	SVF1	Q05515	481 aa		6.08	□□□□□ -1.44
VMA22	YHR060W	ENV9	Q08651	330 aa		6.08	□□□□□ -1.44
VMA22	YHR060W	AFT1	P22149	690 aa		6.07	□□□□□ -1.44
VMA22	YHR060W	ISF1	P32488	338 aa		6.07	□□□□□ -1.44
VMA22	YHR060W	MRX10	Q05648	414 aa		6.07	□□□□□ -1.44
VMA22	YHR060W	MET32	Q12041	191 aa		6.07	□□□□□ -1.44
VMA22	YHR060W	ASH1	P34233	588 aa		6.06	□□□□□ -1.44
VMA22	YHR060W	ATG20	Q07528	640 aa		6.06	□□□□□ -1.44
VMA22	YHR060W	RPP2B	P02400	110 aa	Known RBP	6.05	□□□□□ -1.44
VMA22	YHR060W	APL6	P46682	809 aa		6.05	□□□□□ -1.44
VMA22	YHR060W	MSB3	P48566	633 aa	Predicted RBP	6.05	□□□□□ -1.44
VMA22	YHR060W	APP1	P53933	587 aa		6.05	□□□□□ -1.44
VMA22	YHR060W	UGA3	P26370	528 aa		6.04	□□□□□ -1.44
VMA22	YHR060W	MKS1	P34072	584 aa		6.04	□□□□□ -1.44
VMA22	YHR060W	BRN1	P38170	754 aa		6.04	□□□□□ -1.44
VMA22	YHR060W	GCR2	Q01722	534 aa		6.04	□□□□□ -1.44
VMA22	YHR060W	FPR4	Q06205	392 aa	Predicted RBP	6.04	□□□□□ -1.44
VMA22	YHR060W	YBL113C	Q7M4S9	792 aa		6.04	□□□□□ -1.44
VMA22	YHR060W	YBL086C	P38177	466 aa		6.03	□□□□□ -1.44
VMA22	YHR060W	IPL1	P38991	367 aa		6.03	□□□□□ -1.44
VMA22	YHR060W	NNF1	P47149	201 aa		6.03	□□□□□ -1.44
VMA22	YHR060W	FBP26	P32604	452 aa		6.02	□□□□□ -1.45
VMA22	YHR060W	DOS2	P54858	310 aa		6.02	□□□□□ -1.45
VMA22	YHR060W	SRC1	Q03707	834 aa		6.02	□□□□□ -1.45
VMA22	YHR060W	MSC6	Q08818	692 aa	Known RBP	6.02	□□□□□ -1.45
VMA22	YHR060W	SOH1	P38633	127 aa		6.01	□□□□□ -1.45
VMA22	YHR060W	ISU1	Q03020	165 aa		6.01	□□□□□ -1.45
VMA22	YHR060W	ISR1	Q06098	443 aa	Known RBP	6.01	□□□□□ -1.45
VMA22	YHR060W	RDS2	P19541	446 aa	Known RBP	6	□□□□□ -1.45
VMA22	YHR060W	PEP12	P32854	288 aa		6	□□□□□ -1.45
VMA22	YHR060W	OCA5	P38738	679 aa		6	□□□□□ -1.45
VMA22	YHR060W	BRE2	P43132	505 aa		6	□□□□□ -1.45
VMA22	YHR060W	ECM23	Q02710	187 aa		6	□□□□□ -1.45
VMA22	YHR060W	KAR5	Q04746	504 aa		6	□□□□□ -1.45
VMA22	YHR060W	STE6	P12866	1290 aa		5.99	□□□□□ -1.45
VMA22	YHR060W	ERP5	P38819	212 aa		5.99	□□□□□ -1.45
VMA22	YHR060W	YFL034W	P43564	1073 aa		5.99	□□□□□ -1.45
VMA22	YHR060W	BDS1	Q08347	646 aa		5.99	□□□□□ -1.45
VMA22	YHR060W	SRF1	Q12516	437 aa		5.99	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms