RNA–Protein interactions for RNA: YHR039C-A

VMA10, Transcript of Subunit G of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA10, Length 345 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA10YHR039C-A KIP2P28743 706 aa5.54□□□□□ -1.52
VMA10YHR039C-A IXR1P33417 597 aa5.54□□□□□ -1.52
VMA10YHR039C-A YPR084WQ06821 456 aa5.54□□□□□ -1.52
VMA10YHR039C-A AIR1P40507 360 aaKnown RBP5.53□□□□□ -1.52
VMA10YHR039C-A ITT1Q04638 464 aa5.53□□□□□ -1.52
VMA10YHR039C-A RLF2Q12495 606 aa5.53□□□□□ -1.52
VMA10YHR039C-A ENO2P00925 437 aaKnown RBP5.52□□□□□ -1.53
VMA10YHR039C-A GUT2P32191 649 aa5.52□□□□□ -1.53
VMA10YHR039C-A ISF1P32488 338 aa5.51□□□□□ -1.53
VMA10YHR039C-A RPL34BP40525 121 aaKnown RBP5.51□□□□□ -1.53
VMA10YHR039C-A MCM16Q12262 181 aa5.51□□□□□ -1.53
VMA10YHR039C-A RTG2P32608 588 aaKnown RBP5.5□□□□□ -1.53
VMA10YHR039C-A EMP47P43555 445 aa5.5□□□□□ -1.53
VMA10YHR039C-A STE20Q03497 939 aaKnown RBP5.5□□□□□ -1.53
VMA10YHR039C-A SRC1Q03707 834 aa5.5□□□□□ -1.53
VMA10YHR039C-A FRA1Q07825 749 aa5.5□□□□□ -1.53
VMA10YHR039C-A MET32Q12041 191 aa5.5□□□□□ -1.53
VMA10YHR039C-A CDC4P07834 779 aa5.49□□□□□ -1.53
VMA10YHR039C-A YPP1P46951 817 aa5.48□□□□□ -1.53
VMA10YHR039C-A RIM21P48565 533 aa5.48□□□□□ -1.53
VMA10YHR039C-A MRT4P33201 236 aaKnown RBP5.47□□□□□ -1.53
VMA10YHR039C-A APP1P53933 587 aa5.47□□□□□ -1.53
VMA10YHR039C-A YPR204WQ08995 1032 aa5.47□□□□□ -1.53
VMA10YHR039C-A ENO1P00924 437 aaKnown RBP5.46□□□□□ -1.54
VMA10YHR039C-A TRK1P12685 1235 aa5.46□□□□□ -1.54
VMA10YHR039C-A EMW1P42842 904 aaKnown RBP5.46□□□□□ -1.54
VMA10YHR039C-A MRX10Q05648 414 aa5.46□□□□□ -1.54
VMA10YHR039C-A ASH1P34233 588 aa5.45□□□□□ -1.54
VMA10YHR039C-A MRX12P47084 519 aa5.45□□□□□ -1.54
VMA10YHR039C-A RDS2P19541 446 aaKnown RBP5.44□□□□□ -1.54
VMA10YHR039C-A AFT1P22149 690 aa5.44□□□□□ -1.54
VMA10YHR039C-A APL6P46682 809 aa5.44□□□□□ -1.54
VMA10YHR039C-A HST3P53687 447 aa5.43□□□□□ -1.54
VMA10YHR039C-A YBL086CP38177 466 aa5.42□□□□□ -1.54
VMA10YHR039C-A ATG20Q07528 640 aa5.42□□□□□ -1.54
VMA10YHR039C-A ENV9Q08651 330 aa5.42□□□□□ -1.54
VMA10YHR039C-A MKS1P34072 584 aa5.41□□□□□ -1.54
VMA10YHR039C-A UGA3P26370 528 aa5.4□□□□□ -1.54
VMA10YHR039C-A SOH1P38633 127 aa5.4□□□□□ -1.54
VMA10YHR039C-A ATG3P40344 310 aa5.4□□□□□ -1.54
VMA10YHR039C-A MSB3P48566 633 aaPredicted RBP5.4□□□□□ -1.54
VMA10YHR039C-A UTP13Q05946 817 aaKnown RBP5.4□□□□□ -1.54
VMA10YHR039C-A ISR1Q06098 443 aaKnown RBP5.4□□□□□ -1.54
VMA10YHR039C-A FBP26P32604 452 aa5.39□□□□□ -1.55
VMA10YHR039C-A PEP12P32854 288 aa5.39□□□□□ -1.55
VMA10YHR039C-A TTI1P36097 1038 aa5.39□□□□□ -1.55
VMA10YHR039C-A HAL5P38970 855 aaKnown RBP5.38□□□□□ -1.55
VMA10YHR039C-A RTT106P40161 455 aa5.38□□□□□ -1.55
VMA10YHR039C-A ISU1Q03020 165 aa5.38□□□□□ -1.55
VMA10YHR039C-A DFG5Q05031 458 aa5.38□□□□□ -1.55
VMA10YHR039C-A BRE2P43132 505 aa5.37□□□□□ -1.55
VMA10YHR039C-A YJR115WP47152 169 aa5.37□□□□□ -1.55
VMA10YHR039C-A STE6P12866 1290 aa5.36□□□□□ -1.55
VMA10YHR039C-A CPS1P27614 576 aa5.36□□□□□ -1.55
VMA10YHR039C-A SIS2P36024 562 aa5.36□□□□□ -1.55
VMA10YHR039C-A KTR7P40504 517 aa5.35□□□□□ -1.55
VMA10YHR039C-A GCR2Q01722 534 aa5.35□□□□□ -1.55
VMA10YHR039C-A BDS1Q08347 646 aa5.35□□□□□ -1.55
VMA10YHR039C-A PTK2P47116 818 aaKnown RBP5.34□□□□□ -1.55
VMA10YHR039C-A HDA3Q06623 655 aa5.34□□□□□ -1.55
VMA10YHR039C-A SPT2P06843 333 aaPredicted RBP5.33□□□□□ -1.56
VMA10YHR039C-A ARG82P07250 355 aa5.33□□□□□ -1.56
VMA10YHR039C-A MIP1P15801 1254 aa5.33□□□□□ -1.56
VMA10YHR039C-A TGL4P36165 910 aa5.33□□□□□ -1.56
VMA10YHR039C-A AAD14P42884 376 aa5.33□□□□□ -1.56
VMA10YHR039C-A CBC2Q08920 208 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
VMA10YHR039C-A SRF1Q12516 437 aa5.33□□□□□ -1.56
VMA10YHR039C-A UTR2P32623 467 aa5.32□□□□□ -1.56
VMA10YHR039C-A DAT1P13483 248 aaKnown RBP5.31□□□□□ -1.56
VMA10YHR039C-A SSA4P22202 642 aaKnown RBP5.31□□□□□ -1.56
VMA10YHR039C-A PDI1P17967 522 aaKnown RBP5.3□□□□□ -1.56
VMA10YHR039C-A PUP1P25043 261 aa5.3□□□□□ -1.56
VMA10YHR039C-A AIM9P40053 627 aaKnown RBP5.3□□□□□ -1.56
VMA10YHR039C-A NUP85P46673 744 aa5.3□□□□□ -1.56
VMA10YHR039C-A SUB2Q07478 446 aaKnown RBP5.3□□□□□ -1.56
VMA10YHR039C-A WTM2Q12206 467 aa5.3□□□□□ -1.56
VMA10YHR039C-A TSC13Q99190 310 aa5.3□□□□□ -1.56
VMA10YHR039C-A RPP2BP02400 110 aaKnown RBP5.29□□□□□ -1.56
VMA10YHR039C-A GAL2P13181 574 aa5.29□□□□□ -1.56
VMA10YHR039C-A PHO87P25360 923 aa5.29□□□□□ -1.56
VMA10YHR039C-A TBS1P38114 1094 aa5.29□□□□□ -1.56
VMA10YHR039C-A SLX8P40072 274 aa5.29□□□□□ -1.56
VMA10YHR039C-A ACS2P52910 683 aaKnown RBP5.29□□□□□ -1.56
VMA10YHR039C-A ECM23Q02710 187 aa5.29□□□□□ -1.56
VMA10YHR039C-A NOB1Q08444 459 aaKnown RBP5.29□□□□□ -1.56
VMA10YHR039C-A DLD1P32891 587 aa5.28□□□□□ -1.56
VMA10YHR039C-A DLD3P39976 496 aaKnown RBP5.28□□□□□ -1.56
VMA10YHR039C-A YFL034WP43564 1073 aa5.28□□□□□ -1.56
VMA10YHR039C-A SWI5P08153 709 aa5.27□□□□□ -1.57
VMA10YHR039C-A HAP4P14064 554 aa5.27□□□□□ -1.57
VMA10YHR039C-A MET22P32179 357 aa5.27□□□□□ -1.57
VMA10YHR039C-A NTH2P35172 780 aa5.26□□□□□ -1.57
VMA10YHR039C-A UTP7P40055 554 aaKnown RBP5.26□□□□□ -1.57
VMA10YHR039C-A YML083CQ04526 418 aa5.26□□□□□ -1.57
VMA10YHR039C-A YJR098CP47139 656 aa5.25□□□□□ -1.57
VMA10YHR039C-A ROM1P53046 1155 aa5.25□□□□□ -1.57
VMA10YHR039C-A LSC2P53312 427 aa5.25□□□□□ -1.57
VMA10YHR039C-A OPT2Q06593 877 aa5.25□□□□□ -1.57
VMA10YHR039C-A RPS6AP0CX37 236 aaKnown RBP5.24□□□□□ -1.57
VMA10YHR039C-A RPS6BP0CX38 236 aaPredicted RBP5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms