RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W WRS1Q12109 432 aaKnown RBP3.08□□□□□ -1.92
CBF2YGR140W GUT2P32191 649 aa3.07□□□□□ -1.92
CBF2YGR140W PEP7P32609 515 aa3.07□□□□□ -1.92
CBF2YGR140W NPL4P33755 580 aa3.07□□□□□ -1.92
CBF2YGR140W SLI15P38283 698 aa3.07□□□□□ -1.92
CBF2YGR140W RSC30P38781 883 aa3.07□□□□□ -1.92
CBF2YGR140W QDR1P40475 563 aa3.07□□□□□ -1.92
CBF2YGR140W STE20Q03497 939 aaKnown RBP3.07□□□□□ -1.92
CBF2YGR140W GAS4Q08271 471 aa3.07□□□□□ -1.92
CBF2YGR140W WHI5Q12416 295 aa3.07□□□□□ -1.92
CBF2YGR140W TEC1P18412 486 aa3.07□□□□□ -1.92
CBF2YGR140W GAP1P19145 602 aaPredicted RBP3.07□□□□□ -1.92
CBF2YGR140W RDS2P19541 446 aaKnown RBP3.07□□□□□ -1.92
CBF2YGR140W ILV3P39522 585 aaKnown RBP3.07□□□□□ -1.92
CBF2YGR140W TFG1P41895 735 aaPredicted RBP3.07□□□□□ -1.92
CBF2YGR140W SET4P42948 560 aa3.07□□□□□ -1.92
CBF2YGR140W CWH41P53008 833 aa3.07□□□□□ -1.92
CBF2YGR140W YRB30P53107 440 aaPredicted RBP3.07□□□□□ -1.92
CBF2YGR140W CWC24P53769 259 aa3.07□□□□□ -1.92
CBF2YGR140W NUT2Q06213 157 aa3.07□□□□□ -1.92
CBF2YGR140W YOL036WQ08206 761 aa3.07□□□□□ -1.92
CBF2YGR140W YRR1Q12172 810 aa3.07□□□□□ -1.92
CBF2YGR140W TSR4P25040 408 aa3.06□□□□□ -1.92
CBF2YGR140W TPS3P38426 1054 aaKnown RBP3.06□□□□□ -1.92
CBF2YGR140W ACF4P47129 309 aa3.06□□□□□ -1.92
CBF2YGR140W ALD6P54115 500 aaKnown RBP3.06□□□□□ -1.92
CBF2YGR140W POB3Q04636 552 aaKnown RBP3.06□□□□□ -1.92
CBF2YGR140W TRL1P09880 827 aaKnown RBP3.06□□□□□ -1.92
CBF2YGR140W TGL3P40308 642 aa3.06□□□□□ -1.92
CBF2YGR140W SPR3P41901 512 aa3.06□□□□□ -1.92
CBF2YGR140W YFL034WP43564 1073 aa3.06□□□□□ -1.92
CBF2YGR140W YJL049WP47048 450 aa3.06□□□□□ -1.92
CBF2YGR140W STB3Q12427 513 aa3.06□□□□□ -1.92
CBF2YGR140W SOH1P38633 127 aa3.06□□□□□ -1.92
CBF2YGR140W BOL3P39724 118 aa3.06□□□□□ -1.92
CBF2YGR140W DAN4P47179 1161 aa3.06□□□□□ -1.92
CBF2YGR140W YJR107WP47145 328 aa3.05□□□□□ -1.92
CBF2YGR140W PEX29Q03370 554 aa3.05□□□□□ -1.92
CBF2YGR140W CDC53Q12018 815 aaKnown RBP3.05□□□□□ -1.92
CBF2YGR140W YDL206WQ12424 762 aa3.05□□□□□ -1.92
CBF2YGR140W TOM20P35180 183 aa3.05□□□□□ -1.92
CBF2YGR140W ACS2P52910 683 aaKnown RBP3.05□□□□□ -1.92
CBF2YGR140W KEX2P13134 814 aa3.04□□□□□ -1.92
CBF2YGR140W PDI1P17967 522 aaKnown RBP3.04□□□□□ -1.92
CBF2YGR140W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
CBF2YGR140W YGR161W-CQ3E744 92 aa3.04□□□□□ -1.92
CBF2YGR140W YEL023CP39992 682 aa3.04□□□□□ -1.92
CBF2YGR140W FYV10P40492 516 aa3.04□□□□□ -1.92
CBF2YGR140W ROM1P53046 1155 aa3.04□□□□□ -1.92
CBF2YGR140W ALG12P53730 551 aa3.04□□□□□ -1.92
CBF2YGR140W ALD3P54114 506 aa3.04□□□□□ -1.92
CBF2YGR140W RMD1Q03441 430 aa3.04□□□□□ -1.92
CBF2YGR140W TSC13Q99190 310 aa3.04□□□□□ -1.92
CBF2YGR140W STI1P15705 589 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
CBF2YGR140W GCD6P32501 712 aaKnown RBP3.03□□□□□ -1.92
CBF2YGR140W RPT1P33299 467 aaKnown RBP3.03□□□□□ -1.92
CBF2YGR140W UTP13Q05946 817 aaKnown RBP3.03□□□□□ -1.92
CBF2YGR140W MAG2Q06436 670 aaKnown RBP3.03□□□□□ -1.92
CBF2YGR140W FRA1Q07825 749 aa3.03□□□□□ -1.92
CBF2YGR140W ALR1Q08269 859 aa3.03□□□□□ -1.92
CBF2YGR140W MIP1P15801 1254 aa3.03□□□□□ -1.92
CBF2YGR140W SIS1P25294 352 aaKnown RBP3.03□□□□□ -1.92
CBF2YGR140W NST1P53935 1240 aa3.03□□□□□ -1.92
CBF2YGR140W DPL1Q05567 589 aa3.03□□□□□ -1.92
CBF2YGR140W ESF1Q06344 628 aaKnown RBP3.03□□□□□ -1.92
CBF2YGR140W UBX5Q06682 500 aa3.03□□□□□ -1.92
CBF2YGR140W MNL2Q12205 849 aa3.03□□□□□ -1.92
CBF2YGR140W FRT1Q99332 602 aa3.03□□□□□ -1.92
CBF2YGR140W UBP9P39967 754 aa3.02□□□□□ -1.93
CBF2YGR140W OXR1Q08952 273 aa3.02□□□□□ -1.93
CBF2YGR140W SSB1P11484 613 aaKnown RBP3.02□□□□□ -1.93
CBF2YGR140W MCM2P29469 868 aa3.02□□□□□ -1.93
CBF2YGR140W NUD1P32336 851 aa3.02□□□□□ -1.93
CBF2YGR140W SSB2P40150 613 aaKnown RBP3.02□□□□□ -1.93
CBF2YGR140W RTT106P40161 455 aa3.02□□□□□ -1.93
CBF2YGR140W MSB4Q12317 492 aa3.02□□□□□ -1.93
CBF2YGR140W MET4P32389 672 aa3.02□□□□□ -1.93
CBF2YGR140W PET112P33893 541 aa3.02□□□□□ -1.93
CBF2YGR140W VPS16Q03308 798 aa3.02□□□□□ -1.93
CBF2YGR140W TRS120Q04183 1289 aa3.02□□□□□ -1.93
CBF2YGR140W NSE3Q05541 303 aa3.02□□□□□ -1.93
CBF2YGR140W URN1Q06525 465 aaKnown RBP3.02□□□□□ -1.93
CBF2YGR140W CIT2P08679 460 aa3.01□□□□□ -1.93
CBF2YGR140W UFD2P54860 961 aa3.01□□□□□ -1.93
CBF2YGR140W ISU2Q12056 156 aa3.01□□□□□ -1.93
CBF2YGR140W AIM9P40053 627 aaKnown RBP3.01□□□□□ -1.93
CBF2YGR140W RPA14P50106 137 aa3.01□□□□□ -1.93
CBF2YGR140W YGL081WP53156 320 aa3.01□□□□□ -1.93
CBF2YGR140W FOX2Q02207 900 aaKnown RBP3.01□□□□□ -1.93
CBF2YGR140W SPR28Q04921 423 aa3.01□□□□□ -1.93
CBF2YGR140W PIN2Q12057 282 aa3.01□□□□□ -1.93
CBF2YGR140W MET6P05694 767 aaKnown RBP3□□□□□ -1.93
CBF2YGR140W CIC1P38779 376 aaKnown RBP3□□□□□ -1.93
CBF2YGR140W NAB3P38996 802 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
CBF2YGR140W MSH4P40965 878 aaPredicted RBP3□□□□□ -1.93
CBF2YGR140W FIG4P42837 879 aa3□□□□□ -1.93
CBF2YGR140W KXD1P53158 218 aa3□□□□□ -1.93
CBF2YGR140W EAP1P36041 632 aaKnown RBP3□□□□□ -1.93
CBF2YGR140W NOP2P40991 618 aaKnown RBP3□□□□□ -1.93
CBF2YGR140W IOC3P43596 787 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms