RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeastyeast

Gene VAM7, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM7YGL212W AIM21P40563 679 aa6.72□□□□□ -1.33
VAM7YGL212W PLP2Q12017 286 aa6.72□□□□□ -1.33
VAM7YGL212W PRP40P33203 583 aaKnown RBP6.71□□□□□ -1.34
VAM7YGL212W TOM20P35180 183 aa6.71□□□□□ -1.34
VAM7YGL212W FOX2Q02207 900 aaKnown RBP6.71□□□□□ -1.34
VAM7YGL212W SRB8P25648 1427 aa6.7□□□□□ -1.34
VAM7YGL212W TAF13P11747 167 aa6.7□□□□□ -1.34
VAM7YGL212W TY3B-IQ7LHG5 1498 aaKnown RBP6.7□□□□□ -1.34
VAM7YGL212W EAF6P47128 113 aa6.69□□□□□ -1.34
VAM7YGL212W KEX1P09620 729 aa6.68□□□□□ -1.34
VAM7YGL212W HEM3P28789 327 aa6.68□□□□□ -1.34
VAM7YGL212W MFT1P33441 392 aaKnown RBP6.68□□□□□ -1.34
VAM7YGL212W TIF4632P39936 914 aaKnown RBP6.68□□□□□ -1.34
VAM7YGL212W SQS1P53866 767 aaKnown RBP6.68□□□□□ -1.34
VAM7YGL212W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
VAM7YGL212W DAL5P15365 543 aa6.67□□□□□ -1.34
VAM7YGL212W SEC20P28791 383 aa6.67□□□□□ -1.34
VAM7YGL212W YNR021WP53723 404 aaKnown RBP6.67□□□□□ -1.34
VAM7YGL212W TMA64Q04600 565 aaKnown RBP6.67□□□□□ -1.34
VAM7YGL212W TAF5P38129 798 aa6.66□□□□□ -1.34
VAM7YGL212W IES2P40154 320 aa6.66□□□□□ -1.34
VAM7YGL212W NOP2P40991 618 aaKnown RBP6.66□□□□□ -1.34
VAM7YGL212W ALD4P46367 519 aaKnown RBP6.66□□□□□ -1.34
VAM7YGL212W URB1P34241 1764 aaKnown RBP6.66□□□□□ -1.34
VAM7YGL212W PSK1P31374 1356 aa6.66□□□□□ -1.34
VAM7YGL212W RSF2P46974 1380 aa6.66□□□□□ -1.34
VAM7YGL212W ROM2P51862 1356 aaKnown RBP6.66□□□□□ -1.34
VAM7YGL212W SPT2P06843 333 aaPredicted RBP6.65□□□□□ -1.34
VAM7YGL212W RNA1P11745 407 aaKnown RBP6.65□□□□□ -1.34
VAM7YGL212W VMA4P22203 233 aaKnown RBP6.65□□□□□ -1.34
VAM7YGL212W MPE1P35728 441 aaKnown RBP6.65□□□□□ -1.34
VAM7YGL212W TPM2P40414 161 aa6.65□□□□□ -1.34
VAM7YGL212W YDL121CQ07541 149 aa6.65□□□□□ -1.34
VAM7YGL212W PMC1P38929 1173 aaPredicted RBP6.64□□□□□ -1.35
VAM7YGL212W ERP2P39704 215 aa6.64□□□□□ -1.35
VAM7YGL212W NOC2P39744 710 aaKnown RBP6.64□□□□□ -1.35
VAM7YGL212W BOI2P39969 1040 aa6.64□□□□□ -1.35
VAM7YGL212W VPS27P40343 622 aaKnown RBP6.64□□□□□ -1.35
VAM7YGL212W RAD9P14737 1309 aa6.64□□□□□ -1.35
VAM7YGL212W QCR6P00127 147 aa6.63□□□□□ -1.35
VAM7YGL212W HSC82P15108 705 aaKnown RBP6.63□□□□□ -1.35
VAM7YGL212W POL5P39985 1022 aaKnown RBP6.63□□□□□ -1.35
VAM7YGL212W NNF1P47149 201 aa6.63□□□□□ -1.35
VAM7YGL212W AIM7Q12156 149 aa6.63□□□□□ -1.35
VAM7YGL212W ALD3P54114 506 aa6.62□□□□□ -1.35
VAM7YGL212W MEH1Q02205 184 aa6.62□□□□□ -1.35
VAM7YGL212W YEF3P16521 1044 aaKnown RBP6.61□□□□□ -1.35
VAM7YGL212W PRP5P21372 849 aaPredicted RBP6.61□□□□□ -1.35
VAM7YGL212W RRP14P36080 434 aaKnown RBP6.61□□□□□ -1.35
VAM7YGL212W ESF2P53743 316 aaKnown RBP6.61□□□□□ -1.35
VAM7YGL212W SEN54Q02825 467 aaPredicted RBP6.61□□□□□ -1.35
VAM7YGL212W RPA135P22138 1203 aaKnown RBP6.6□□□□□ -1.35
VAM7YGL212W BLI1P35727 113 aa6.6□□□□□ -1.35
VAM7YGL212W ETP1P38748 585 aaKnown RBP6.6□□□□□ -1.35
VAM7YGL212W CST6P40535 587 aa6.6□□□□□ -1.35
VAM7YGL212W YPR148CQ06523 435 aa6.6□□□□□ -1.35
VAM7YGL212W VPS13Q07878 3144 aa6.59□□□□□ -1.35
VAM7YGL212W POM152P39685 1337 aa6.59□□□□□ -1.35
VAM7YGL212W BDF1P35817 686 aa6.59□□□□□ -1.35
VAM7YGL212W DSF2P38213 736 aa6.59□□□□□ -1.35
VAM7YGL212W IES1P43579 692 aa6.59□□□□□ -1.35
VAM7YGL212W YGL081WP53156 320 aa6.59□□□□□ -1.35
VAM7YGL212W ENV11P53246 860 aa6.59□□□□□ -1.35
VAM7YGL212W PIB1Q06651 286 aa6.59□□□□□ -1.35
VAM7YGL212W PSK2Q08217 1101 aa6.59□□□□□ -1.35
VAM7YGL212W SPT7P35177 1332 aa6.58□□□□□ -1.36
VAM7YGL212W RIM101P33400 625 aa6.58□□□□□ -1.36
VAM7YGL212W YER156CP40093 338 aaKnown RBP6.58□□□□□ -1.36
VAM7YGL212W SAP155P43612 1002 aa6.58□□□□□ -1.36
VAM7YGL212W TSR4P25040 408 aa6.57□□□□□ -1.36
VAM7YGL212W ENP1P38333 483 aaKnown RBP6.57□□□□□ -1.36
VAM7YGL212W VPS70P47161 811 aa6.57□□□□□ -1.36
VAM7YGL212W MSB3P48566 633 aaPredicted RBP6.57□□□□□ -1.36
VAM7YGL212W RNH70P53331 553 aa6.57□□□□□ -1.36
VAM7YGL212W HPC2Q01448 625 aa6.57□□□□□ -1.36
VAM7YGL212W SYH1Q02875 849 aaKnown RBP6.57□□□□□ -1.36
VAM7YGL212W COBP00163 385 aa6.56□□□□□ -1.36
VAM7YGL212W SSB1P11484 613 aaKnown RBP6.56□□□□□ -1.36
VAM7YGL212W PWP2P25635 923 aaKnown RBP6.56□□□□□ -1.36
VAM7YGL212W CDC3P32457 520 aaKnown RBP6.56□□□□□ -1.36
VAM7YGL212W GUA1P38625 525 aaKnown RBP6.56□□□□□ -1.36
VAM7YGL212W SSB2P40150 613 aaKnown RBP6.56□□□□□ -1.36
VAM7YGL212W CAB1Q04430 367 aa6.56□□□□□ -1.36
VAM7YGL212W CTT1P06115 562 aa6.55□□□□□ -1.36
VAM7YGL212W NMD3P38861 518 aaKnown RBP6.55□□□□□ -1.36
VAM7YGL212W MSN5P52918 1224 aa6.55□□□□□ -1.36
VAM7YGL212W CEF1Q03654 590 aaPredicted RBP6.55□□□□□ -1.36
VAM7YGL212W NKP1Q12493 238 aa6.55□□□□□ -1.36
VAM7YGL212W FKS3Q04952 1785 aa6.54□□□□□ -1.36
VAM7YGL212W YLR278CQ05854 1341 aa6.54□□□□□ -1.36
VAM7YGL212W SNF2P22082 1703 aa6.54□□□□□ -1.36
VAM7YGL212W YKR075CP36155 307 aa6.54□□□□□ -1.36
VAM7YGL212W PKH1Q03407 766 aa6.54□□□□□ -1.36
VAM7YGL212W COG4Q06096 861 aa6.54□□□□□ -1.36
VAM7YGL212W YOL057WQ08225 711 aa6.54□□□□□ -1.36
VAM7YGL212W MAK16P10962 306 aaPredicted RBP6.53□□□□□ -1.36
VAM7YGL212W OPI1P21957 404 aa6.53□□□□□ -1.36
VAM7YGL212W CDC11P32458 415 aa6.53□□□□□ -1.36
VAM7YGL212W GLC3P32775 704 aa6.53□□□□□ -1.36
VAM7YGL212W STM1P39015 273 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms