RNA–Protein interactions for RNA: YFL049W

SWP82, Transcript of Member of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWP82, Length 1,872 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWP82YFL049W TTI1P36097 1038 aa5.47□□□□□ -1.53
SWP82YFL049W YML083CQ04526 418 aa5.47□□□□□ -1.53
SWP82YFL049W BUD21Q08492 214 aaPredicted RBP5.47□□□□□ -1.53
SWP82YFL049W GIN4Q12263 1142 aa5.47□□□□□ -1.53
SWP82YFL049W MMP1Q12372 583 aa5.47□□□□□ -1.53
SWP82YFL049W THO2P53552 1597 aaKnown RBP5.47□□□□□ -1.53
SWP82YFL049W YNL115CP53925 644 aa5.47□□□□□ -1.53
SWP82YFL049W YAF9P53930 226 aa5.47□□□□□ -1.53
SWP82YFL049W IPL1P38991 367 aa5.46□□□□□ -1.54
SWP82YFL049W RTF1P53064 558 aa5.46□□□□□ -1.54
SWP82YFL049W SUB1P54000 292 aaKnown RBP5.46□□□□□ -1.54
SWP82YFL049W AGE1Q04412 482 aa5.46□□□□□ -1.54
SWP82YFL049W SLY41P22215 453 aa5.45□□□□□ -1.54
SWP82YFL049W ASF1P32447 279 aa5.45□□□□□ -1.54
SWP82YFL049W CST6P40535 587 aa5.45□□□□□ -1.54
SWP82YFL049W VPS72Q03388 795 aa5.45□□□□□ -1.54
SWP82YFL049W ITT1Q04638 464 aa5.45□□□□□ -1.54
SWP82YFL049W GCD11P32481 527 aaKnown RBP5.45□□□□□ -1.54
SWP82YFL049W NPL4P33755 580 aa5.45□□□□□ -1.54
SWP82YFL049W SSA2P10592 639 aaKnown RBP5.44□□□□□ -1.54
SWP82YFL049W VRP1P37370 817 aa5.44□□□□□ -1.54
SWP82YFL049W PKH3Q03306 898 aaPredicted RBP5.44□□□□□ -1.54
SWP82YFL049W UBX5Q06682 500 aa5.44□□□□□ -1.54
SWP82YFL049W RSC30P38781 883 aa5.43□□□□□ -1.54
SWP82YFL049W YPR204WQ08995 1032 aa5.43□□□□□ -1.54
SWP82YFL049W PRT1P06103 763 aaKnown RBP5.43□□□□□ -1.54
SWP82YFL049W OSW7P43611 510 aa5.43□□□□□ -1.54
SWP82YFL049W TUB4P53378 473 aa5.42□□□□□ -1.54
SWP82YFL049W RAD59Q12223 238 aa5.42□□□□□ -1.54
SWP82YFL049W SDH2P21801 266 aa5.41□□□□□ -1.54
SWP82YFL049W NMD2P38798 1089 aaKnown RBP5.41□□□□□ -1.54
SWP82YFL049W RNH70P53331 553 aa5.41□□□□□ -1.54
SWP82YFL049W REV3P14284 1504 aa5.41□□□□□ -1.54
SWP82YFL049W TRM1P15565 570 aaKnown RBP5.41□□□□□ -1.54
SWP82YFL049W PUP1P25043 261 aa5.41□□□□□ -1.54
SWP82YFL049W PAC1P39946 494 aaKnown RBP5.41□□□□□ -1.54
SWP82YFL049W FPR4Q06205 392 aaPredicted RBP5.41□□□□□ -1.54
SWP82YFL049W RRP15Q06511 250 aaPredicted RBP5.41□□□□□ -1.54
SWP82YFL049W BIO2P32451 375 aa5.4□□□□□ -1.55
SWP82YFL049W BCK2P33306 851 aa5.4□□□□□ -1.55
SWP82YFL049W MDS3P53094 1487 aa5.4□□□□□ -1.55
SWP82YFL049W ATE1P16639 503 aa5.39□□□□□ -1.55
SWP82YFL049W RTG2P32608 588 aaKnown RBP5.39□□□□□ -1.55
SWP82YFL049W RPL34BP40525 121 aaKnown RBP5.39□□□□□ -1.55
SWP82YFL049W RRN7P40992 514 aa5.39□□□□□ -1.55
SWP82YFL049W TOM20P35180 183 aa5.39□□□□□ -1.55
SWP82YFL049W NNF1P47149 201 aa5.39□□□□□ -1.55
SWP82YFL049W ARG8P18544 423 aa5.38□□□□□ -1.55
SWP82YFL049W PUS6P53294 404 aa5.37□□□□□ -1.55
SWP82YFL049W GYP1Q08484 637 aa5.37□□□□□ -1.55
SWP82YFL049W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SWP82YFL049W ZDS1P50111 915 aaKnown RBP5.37□□□□□ -1.55
SWP82YFL049W MAG2Q06436 670 aaKnown RBP5.36□□□□□ -1.55
SWP82YFL049W YDL206WQ12424 762 aa5.36□□□□□ -1.55
SWP82YFL049W SIN3P22579 1536 aa5.36□□□□□ -1.55
SWP82YFL049W TAF2P23255 1407 aa5.35□□□□□ -1.55
SWP82YFL049W PMC1P38929 1173 aaPredicted RBP5.35□□□□□ -1.55
SWP82YFL049W KRI1P42846 591 aaKnown RBP5.35□□□□□ -1.55
SWP82YFL049W SAS4Q04003 481 aa5.35□□□□□ -1.55
SWP82YFL049W ATG2P53855 1592 aa5.35□□□□□ -1.55
SWP82YFL049W TSR4P25040 408 aa5.34□□□□□ -1.55
SWP82YFL049W YNL108CP53929 270 aa5.34□□□□□ -1.55
SWP82YFL049W PEP1P32319 1579 aa5.34□□□□□ -1.55
SWP82YFL049W XDJ1P39102 459 aa5.34□□□□□ -1.55
SWP82YFL049W YOL098CQ12496 1037 aa5.34□□□□□ -1.55
SWP82YFL049W PDC1P06169 563 aaKnown RBP5.33□□□□□ -1.56
SWP82YFL049W MOD5P07884 428 aa5.33□□□□□ -1.56
SWP82YFL049W TBF1Q02457 562 aa5.33□□□□□ -1.56
SWP82YFL049W YBL113CQ7M4S9 792 aa5.33□□□□□ -1.56
SWP82YFL049W SPT16P32558 1035 aaKnown RBP5.32□□□□□ -1.56
SWP82YFL049W YBL036CP38197 257 aa5.32□□□□□ -1.56
SWP82YFL049W STM1P39015 273 aaKnown RBP5.32□□□□□ -1.56
SWP82YFL049W MSC6Q08818 692 aaKnown RBP5.32□□□□□ -1.56
SWP82YFL049W SKI3P17883 1432 aaKnown RBP5.32□□□□□ -1.56
SWP82YFL049W MAK16P10962 306 aaPredicted RBP5.32□□□□□ -1.56
SWP82YFL049W ERP5P38819 212 aa5.32□□□□□ -1.56
SWP82YFL049W RPA14P50106 137 aa5.32□□□□□ -1.56
SWP82YFL049W CIT2P08679 460 aa5.31□□□□□ -1.56
SWP82YFL049W POL32P47110 350 aa5.31□□□□□ -1.56
SWP82YFL049W SSK2P53599 1579 aa5.31□□□□□ -1.56
SWP82YFL049W PPG1P32838 368 aa5.3□□□□□ -1.56
SWP82YFL049W SEC8P32855 1065 aa5.3□□□□□ -1.56
SWP82YFL049W YPR097WQ06839 1073 aa5.3□□□□□ -1.56
SWP82YFL049W ENO1P00924 437 aaKnown RBP5.3□□□□□ -1.56
SWP82YFL049W YDJ1P25491 409 aaKnown RBP5.3□□□□□ -1.56
SWP82YFL049W PAT1P25644 796 aaKnown RBP5.3□□□□□ -1.56
SWP82YFL049W OYE2Q03558 400 aaKnown RBP5.3□□□□□ -1.56
SWP82YFL049W WHI5Q12416 295 aa5.3□□□□□ -1.56
SWP82YFL049W SUP45P12385 437 aaKnown RBP5.29□□□□□ -1.56
SWP82YFL049W RPA135P22138 1203 aaKnown RBP5.29□□□□□ -1.56
SWP82YFL049W SEC20P28791 383 aa5.29□□□□□ -1.56
SWP82YFL049W CSE4P36012 229 aa5.29□□□□□ -1.56
SWP82YFL049W IOC3P43596 787 aa5.29□□□□□ -1.56
SWP82YFL049W YFR016CP43597 1233 aaKnown RBP5.29□□□□□ -1.56
SWP82YFL049W JIP5Q06214 492 aaPredicted RBP5.29□□□□□ -1.56
SWP82YFL049W STB3Q12427 513 aa5.29□□□□□ -1.56
SWP82YFL049W TGL4P36165 910 aa5.28□□□□□ -1.56
SWP82YFL049W HXT10P43581 546 aa5.28□□□□□ -1.56
SWP82YFL049W ALG12P53730 551 aa5.28□□□□□ -1.56
SWP82YFL049W YOL057WQ08225 711 aa5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms