RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W MID1P41821 548 aa6.76□□□□□ -1.33
UBP9YER098W HAP4P14064 554 aa6.75□□□□□ -1.33
UBP9YER098W MMS22Q06164 1454 aa6.75□□□□□ -1.33
UBP9YER098W FPR4Q06205 392 aaPredicted RBP6.75□□□□□ -1.33
UBP9YER098W NUT2Q06213 157 aa6.75□□□□□ -1.33
UBP9YER098W FRA1Q07825 749 aa6.75□□□□□ -1.33
UBP9YER098W FRT1Q99332 602 aa6.75□□□□□ -1.33
UBP9YER098W FUR4P05316 633 aaKnown RBP6.74□□□□□ -1.33
UBP9YER098W TEC1P18412 486 aa6.74□□□□□ -1.33
UBP9YER098W GLO3P38682 493 aaKnown RBP6.74□□□□□ -1.33
UBP9YER098W CST6P40535 587 aa6.74□□□□□ -1.33
UBP9YER098W DOS2P54858 310 aa6.74□□□□□ -1.33
UBP9YER098W STE20Q03497 939 aaKnown RBP6.74□□□□□ -1.33
UBP9YER098W PUN1Q06991 263 aa6.74□□□□□ -1.33
UBP9YER098W SOH1P38633 127 aa6.74□□□□□ -1.33
UBP9YER098W QDR1P40475 563 aa6.73□□□□□ -1.33
UBP9YER098W TRP5P00931 707 aaKnown RBP6.73□□□□□ -1.33
UBP9YER098W SRS2P12954 1174 aa6.73□□□□□ -1.33
UBP9YER098W MET1P36150 593 aa6.73□□□□□ -1.33
UBP9YER098W MGE1P38523 228 aa6.73□□□□□ -1.33
UBP9YER098W ATG3P40344 310 aa6.73□□□□□ -1.33
UBP9YER098W MAG2Q06436 670 aaKnown RBP6.73□□□□□ -1.33
UBP9YER098W ISU2Q12056 156 aa6.73□□□□□ -1.33
UBP9YER098W ENP1P38333 483 aaKnown RBP6.72□□□□□ -1.33
UBP9YER098W YJR107WP47145 328 aa6.72□□□□□ -1.33
UBP9YER098W YPR084WQ06821 456 aa6.72□□□□□ -1.33
UBP9YER098W WSC3Q12215 556 aa6.72□□□□□ -1.33
UBP9YER098W GUT2P32191 649 aa6.71□□□□□ -1.33
UBP9YER098W FIG4P42837 879 aa6.71□□□□□ -1.33
UBP9YER098W GAS4Q08271 471 aa6.71□□□□□ -1.34
UBP9YER098W MET4P32389 672 aa6.7□□□□□ -1.34
UBP9YER098W APL6P46682 809 aa6.7□□□□□ -1.34
UBP9YER098W TUB4P53378 473 aa6.7□□□□□ -1.34
UBP9YER098W PML39Q03760 334 aa6.7□□□□□ -1.34
UBP9YER098W AGE1Q04412 482 aa6.7□□□□□ -1.34
UBP9YER098W PDI1P17967 522 aaKnown RBP6.7□□□□□ -1.34
UBP9YER098W EAP1P36041 632 aaKnown RBP6.7□□□□□ -1.34
UBP9YER098W ACF4P47129 309 aa6.7□□□□□ -1.34
UBP9YER098W TSC13Q99190 310 aa6.7□□□□□ -1.34
UBP9YER098W NPL4P33755 580 aa6.69□□□□□ -1.34
UBP9YER098W RPA14P50106 137 aa6.69□□□□□ -1.34
UBP9YER098W FAR11P53917 953 aa6.69□□□□□ -1.34
UBP9YER098W JIP4Q03361 876 aa6.69□□□□□ -1.34
UBP9YER098W UTP13Q05946 817 aaKnown RBP6.69□□□□□ -1.34
UBP9YER098W NMA111P53920 997 aa6.69□□□□□ -1.34
UBP9YER098W YAF9P53930 226 aa6.69□□□□□ -1.34
UBP9YER098W PEX29Q03370 554 aa6.69□□□□□ -1.34
UBP9YER098W FYV10P40492 516 aa6.67□□□□□ -1.34
UBP9YER098W YOL098CQ12496 1037 aa6.67□□□□□ -1.34
UBP9YER098W PDR1P12383 1068 aa6.67□□□□□ -1.34
UBP9YER098W NMD2P38798 1089 aaKnown RBP6.67□□□□□ -1.34
UBP9YER098W STR2P47164 639 aa6.67□□□□□ -1.34
UBP9YER098W VAN1P23642 535 aa6.66□□□□□ -1.34
UBP9YER098W ISM1P48526 1002 aa6.66□□□□□ -1.34
UBP9YER098W YPR097WQ06839 1073 aa6.66□□□□□ -1.34
UBP9YER098W MNL2Q12205 849 aa6.66□□□□□ -1.34
UBP9YER098W ALR1Q08269 859 aa6.66□□□□□ -1.34
UBP9YER098W TCB3Q03640 1545 aaKnown RBP6.65□□□□□ -1.34
UBP9YER098W VAC8P39968 578 aa6.65□□□□□ -1.34
UBP9YER098W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.65□□□□□ -1.34not detected
UBP9YER098W RAM1P22007 431 aa6.65□□□□□ -1.35
UBP9YER098W RNH70P53331 553 aa6.65□□□□□ -1.35
UBP9YER098W TRS33Q99394 268 aa6.65□□□□□ -1.35
UBP9YER098W CHD1P32657 1468 aa6.65□□□□□ -1.35
UBP9YER098W UFD4P33202 1483 aa6.65□□□□□ -1.35
UBP9YER098W MIP1P15801 1254 aa6.64□□□□□ -1.35
UBP9YER098W HAL5P38970 855 aaKnown RBP6.64□□□□□ -1.35
UBP9YER098W ALD3P54114 506 aa6.64□□□□□ -1.35
UBP9YER098W TY1A-DR4O74302 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-HP0C2I4 478 aaKnown RBP6.63□□□□□ -1.35
UBP9YER098W TY1A-AP0CX57 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-PR1P0CX58 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-ORP0CX59 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-PR2P0CX60 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-DR5P0CX65 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-ER2P0CX66 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-GR3P0CX67 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-LR1P0CX68 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-MR2P0CX69 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-JR2P47099 440 aa6.63□□□□□ -1.35
UBP9YER098W ALD6P54115 500 aaKnown RBP6.63□□□□□ -1.35
UBP9YER098W TY1A-DR1Q03856 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-ML1Q04706 440 aaKnown RBP6.63□□□□□ -1.35
UBP9YER098W TY1A-BRQ12217 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-NL2Q12470 440 aa6.63□□□□□ -1.35
UBP9YER098W TY1A-GR2Q12485 440 aa6.63□□□□□ -1.35
UBP9YER098W XRN1P22147 1528 aaKnown RBP6.63□□□□□ -1.35
UBP9YER098W SEC2P17065 759 aa6.62□□□□□ -1.35
UBP9YER098W GCD11P32481 527 aaKnown RBP6.62□□□□□ -1.35
UBP9YER098W SUV3P32580 737 aa6.62□□□□□ -1.35
UBP9YER098W SPR28Q04921 423 aa6.62□□□□□ -1.35
UBP9YER098W LSO1Q3E827 93 aa6.62□□□□□ -1.35
UBP9YER098W PDC1P06169 563 aaKnown RBP6.62□□□□□ -1.35
UBP9YER098W MCM2P29469 868 aa6.62□□□□□ -1.35
UBP9YER098W AIM9P40053 627 aaKnown RBP6.62□□□□□ -1.35
UBP9YER098W SPT7P35177 1332 aa6.62□□□□□ -1.35
UBP9YER098W BOI1P38041 980 aaKnown RBP6.61□□□□□ -1.35
UBP9YER098W GPI13Q07830 1017 aa6.61□□□□□ -1.35
UBP9YER098W RPT1P33299 467 aaKnown RBP6.61□□□□□ -1.35
UBP9YER098W IXR1P33417 597 aa6.61□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms