RNA–Protein interactions for RNA: YER003C

PMI40, Transcript of Mannose-6-phosphate isomerase, yeast

Gene PMI40, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMI40	YER003C	SSA4	P22202	642 aa	Known RBP	5.58	□□□□□ -1.52
PMI40	YER003C	RPL34B	P40525	121 aa	Known RBP	5.58	□□□□□ -1.52
PMI40	YER003C	YML020W	Q03722	664 aa		5.58	□□□□□ -1.52
PMI40	YER003C	SLX8	P40072	274 aa		5.57	□□□□□ -1.52
PMI40	YER003C	RPA14	P50106	137 aa		5.57	□□□□□ -1.52
PMI40	YER003C	NOP8	Q08287	484 aa	Predicted RBP	5.57	□□□□□ -1.52
PMI40	YER003C	TIF1	P10081	395 aa	Known RBP	5.56	□□□□□ -1.52
PMI40	YER003C	SPT5	P27692	1063 aa	Known RBP	5.56	□□□□□ -1.52
PMI40	YER003C	YDL206W	Q12424	762 aa		5.56	□□□□□ -1.52
PMI40	YER003C	MOD5	P07884	428 aa		5.55	□□□□□ -1.52
PMI40	YER003C	MAK16	P10962	306 aa	Predicted RBP	5.55	□□□□□ -1.52
PMI40	YER003C	AFT1	P22149	690 aa		5.55	□□□□□ -1.52
PMI40	YER003C	KXD1	P53158	218 aa		5.55	□□□□□ -1.52
PMI40	YER003C	HST3	P53687	447 aa		5.55	□□□□□ -1.52
PMI40	YER003C	ALR1	Q08269	859 aa		5.55	□□□□□ -1.52
PMI40	YER003C	RRD1	P40454	393 aa	Known RBP	5.54	□□□□□ -1.52
PMI40	YER003C	YPR097W	Q06839	1073 aa		5.54	□□□□□ -1.52
PMI40	YER003C	NAF1	P53919	492 aa	Known RBP	5.53	□□□□□ -1.52
PMI40	YER003C	BIO2	P32451	375 aa		5.52	□□□□□ -1.53
PMI40	YER003C	TTI1	P36097	1038 aa		5.52	□□□□□ -1.53
PMI40	YER003C	YJR115W	P47152	169 aa		5.52	□□□□□ -1.53
PMI40	YER003C	PDC1	P06169	563 aa	Known RBP	5.51	□□□□□ -1.53
PMI40	YER003C	TPD3	P31383	635 aa		5.51	□□□□□ -1.53
PMI40	YER003C	RTG2	P32608	588 aa	Known RBP	5.51	□□□□□ -1.53
PMI40	YER003C	HXT10	P43581	546 aa		5.5	□□□□□ -1.53
PMI40	YER003C	YPR204W	Q08995	1032 aa		5.5	□□□□□ -1.53
PMI40	YER003C	SUP45	P12385	437 aa	Known RBP	5.49	□□□□□ -1.53
PMI40	YER003C	CPS1	P27614	576 aa		5.49	□□□□□ -1.53
PMI40	YER003C	YPP1	P46951	817 aa		5.48	□□□□□ -1.53
PMI40	YER003C	CAF120	P53836	1060 aa		5.48	□□□□□ -1.53
PMI40	YER003C	YNL108C	P53929	270 aa		5.48	□□□□□ -1.53
PMI40	YER003C	SIS2	P36024	562 aa		5.47	□□□□□ -1.53
PMI40	YER003C	TEC1	P18412	486 aa		5.46	□□□□□ -1.54
PMI40	YER003C	YDJ1	P25491	409 aa	Known RBP	5.45	□□□□□ -1.54
PMI40	YER003C	GUT2	P32191	649 aa		5.45	□□□□□ -1.54
PMI40	YER003C	CDC3	P32457	520 aa	Known RBP	5.45	□□□□□ -1.54
PMI40	YER003C	SLD2	P34252	453 aa		5.45	□□□□□ -1.54
PMI40	YER003C	RPL34A	P87262	121 aa	Predicted RBP	5.45	□□□□□ -1.54
PMI40	YER003C	NOB1	Q08444	459 aa	Known RBP	5.45	□□□□□ -1.54
PMI40	YER003C	MCM16	Q12262	181 aa		5.45	□□□□□ -1.54
PMI40	YER003C	ENO2	P00925	437 aa	Known RBP	5.44	□□□□□ -1.54
PMI40	YER003C	VAC17	P25591	423 aa		5.44	□□□□□ -1.54
PMI40	YER003C	FIG4	P42837	879 aa		5.44	□□□□□ -1.54
PMI40	YER003C	MRX12	P47084	519 aa		5.44	□□□□□ -1.54
PMI40	YER003C	STE20	Q03497	939 aa	Known RBP	5.43	□□□□□ -1.54
PMI40	YER003C	MRX10	Q05648	414 aa		5.43	□□□□□ -1.54
PMI40	YER003C	ENO1	P00924	437 aa	Known RBP	5.42	□□□□□ -1.54
PMI40	YER003C	PUP1	P25043	261 aa		5.42	□□□□□ -1.54
PMI40	YER003C	ATG3	P40344	310 aa		5.42	□□□□□ -1.54
PMI40	YER003C	RIM21	P48565	533 aa		5.42	□□□□□ -1.54
PMI40	YER003C	KIP2	P28743	706 aa		5.41	□□□□□ -1.54
PMI40	YER003C	SYH1	Q02875	849 aa	Known RBP	5.41	□□□□□ -1.54
PMI40	YER003C	FRA1	Q07825	749 aa		5.41	□□□□□ -1.54
PMI40	YER003C	IXR1	P33417	597 aa		5.4	□□□□□ -1.54
PMI40	YER003C	EMP47	P43555	445 aa		5.4	□□□□□ -1.54
PMI40	YER003C	YPR084W	Q06821	456 aa		5.4	□□□□□ -1.54
PMI40	YER003C	MSB3	P48566	633 aa	Predicted RBP	5.39	□□□□□ -1.55
PMI40	YER003C	OPT2	Q06593	877 aa		5.39	□□□□□ -1.55
PMI40	YER003C	TGL4	P36165	910 aa		5.38	□□□□□ -1.55
PMI40	YER003C	ACO2	P39533	789 aa		5.38	□□□□□ -1.55
PMI40	YER003C	MTC5	Q03897	1148 aa		5.38	□□□□□ -1.55
PMI40	YER003C	YML083C	Q04526	418 aa		5.38	□□□□□ -1.55
PMI40	YER003C	ISF1	P32488	338 aa		5.37	□□□□□ -1.55
PMI40	YER003C	PEP12	P32854	288 aa		5.37	□□□□□ -1.55
PMI40	YER003C	SSF1	P38789	453 aa	Predicted RBP	5.37	□□□□□ -1.55
PMI40	YER003C	PTK2	P47116	818 aa	Known RBP	5.37	□□□□□ -1.55
PMI40	YER003C	UTP13	Q05946	817 aa	Known RBP	5.37	□□□□□ -1.55
PMI40	YER003C	UGA3	P26370	528 aa		5.35	□□□□□ -1.55
PMI40	YER003C	HEM3	P28789	327 aa		5.35	□□□□□ -1.55
PMI40	YER003C	APL6	P46682	809 aa		5.35	□□□□□ -1.55
PMI40	YER003C	TRK2	P28584	889 aa		5.34	□□□□□ -1.55
PMI40	YER003C	YIR007W	P40566	764 aa		5.34	□□□□□ -1.55
PMI40	YER003C	EMW1	P42842	904 aa	Known RBP	5.34	□□□□□ -1.55
PMI40	YER003C	YGR035C	P53222	116 aa		5.34	□□□□□ -1.55
PMI40	YER003C	HAT1	Q12341	374 aa		5.34	□□□□□ -1.55
PMI40	YER003C	RDS2	P19541	446 aa	Known RBP	5.33	□□□□□ -1.56
PMI40	YER003C	MRT4	P33201	236 aa	Known RBP	5.33	□□□□□ -1.56
PMI40	YER003C	RTT106	P40161	455 aa		5.33	□□□□□ -1.56
PMI40	YER003C	SNU71	P53207	620 aa	Known RBP	5.33	□□□□□ -1.56
PMI40	YER003C	SEN54	Q02825	467 aa	Predicted RBP	5.33	□□□□□ -1.56
PMI40	YER003C	SRF1	Q12516	437 aa		5.33	□□□□□ -1.56
PMI40	YER003C	AIM44	Q99299	758 aa		5.33	□□□□□ -1.56
PMI40	YER003C	NOP7	P53261	605 aa	Known RBP	5.32	□□□□□ -1.56
PMI40	YER003C	ATG20	Q07528	640 aa		5.32	□□□□□ -1.56
PMI40	YER003C	SOH1	P38633	127 aa		5.31	□□□□□ -1.56
PMI40	YER003C	HPF1	Q05164	967 aa		5.31	□□□□□ -1.56
PMI40	YER003C	GAL2	P13181	574 aa		5.3	□□□□□ -1.56
PMI40	YER003C	APP1	P53933	587 aa		5.3	□□□□□ -1.56
PMI40	YER003C	ECM23	Q02710	187 aa		5.3	□□□□□ -1.56
PMI40	YER003C	RPP2B	P02400	110 aa	Known RBP	5.29	□□□□□ -1.56
PMI40	YER003C	MKS1	P34072	584 aa		5.29	□□□□□ -1.56
PMI40	YER003C	STM1	P39015	273 aa	Known RBP	5.29	□□□□□ -1.56
PMI40	YER003C	ITT1	Q04638	464 aa		5.29	□□□□□ -1.56
PMI40	YER003C	ISR1	Q06098	443 aa	Known RBP	5.29	□□□□□ -1.56
PMI40	YER003C	FBP26	P32604	452 aa		5.28	□□□□□ -1.56
PMI40	YER003C	GLY1	P37303	387 aa	Known RBP	5.28	□□□□□ -1.56
PMI40	YER003C	YBL086C	P38177	466 aa		5.28	□□□□□ -1.56
PMI40	YER003C	KTR7	P40504	517 aa		5.28	□□□□□ -1.56
PMI40	YER003C	YFL034W	P43564	1073 aa		5.28	□□□□□ -1.56
PMI40	YER003C	YLR346C	Q06139	101 aa		5.28	□□□□□ -1.56

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms