RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeastyeast

Gene VMA3, Length 483 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA3YEL027W OSM1P21375 501 aaKnown RBP8.4□□□□□ -1.06
VMA3YEL027W BUG1Q12191 341 aa8.4□□□□□ -1.06
VMA3YEL027W TRK1P12685 1235 aa8.39□□□□□ -1.07
VMA3YEL027W GRX1P25373 110 aaKnown RBP8.39□□□□□ -1.07
VMA3YEL027W RAD4P14736 754 aa8.38□□□□□ -1.07
VMA3YEL027W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.38□□□□□ -1.07not detected
VMA3YEL027W IOC4Q04213 475 aa8.38□□□□□ -1.07
VMA3YEL027W GRE2Q12068 342 aaKnown RBP8.38□□□□□ -1.07
VMA3YEL027W HSP104P31539 908 aaKnown RBP8.36□□□□□ -1.07
VMA3YEL027W DSD1P53095 428 aa8.36□□□□□ -1.07
VMA3YEL027W YBP2P53169 641 aa8.36□□□□□ -1.07
VMA3YEL027W UTP22P53254 1237 aaPredicted RBP8.36□□□□□ -1.07
VMA3YEL027W PAP2P53632 584 aaKnown RBP8.35□□□□□ -1.07
VMA3YEL027W CTF4Q01454 927 aa8.35□□□□□ -1.07
VMA3YEL027W NUP145P49687 1317 aa8.34□□□□□ -1.07
VMA3YEL027W TOS1P38288 455 aa8.34□□□□□ -1.07
VMA3YEL027W SAP155P43612 1002 aa8.34□□□□□ -1.07
VMA3YEL027W AKL1P38080 1108 aaKnown RBP8.32□□□□□ -1.08
VMA3YEL027W HPC2Q01448 625 aa8.32□□□□□ -1.08
VMA3YEL027W EAF6P47128 113 aa8.31□□□□□ -1.08
VMA3YEL027W TUM1Q08686 304 aaKnown RBP8.31□□□□□ -1.08
VMA3YEL027W RRP46P53256 223 aaPredicted RBP8.3□□□□□ -1.08
VMA3YEL027W AOS1Q06624 347 aa8.3□□□□□ -1.08
VMA3YEL027W RTR1P40084 226 aaPredicted RBP8.29□□□□□ -1.08
VMA3YEL027W MSN5P52918 1224 aa8.29□□□□□ -1.08
VMA3YEL027W RMT2Q03305 412 aa8.28□□□□□ -1.08
VMA3YEL027W CTT1P06115 562 aa8.27□□□□□ -1.09
VMA3YEL027W RRT14P40470 206 aa8.27□□□□□ -1.09
VMA3YEL027W RIX7Q07844 837 aaKnown RBP8.27□□□□□ -1.09
VMA3YEL027W KCC4P25389 1037 aa8.26□□□□□ -1.09
VMA3YEL027W NYV1Q12255 253 aa8.26□□□□□ -1.09
VMA3YEL027W RPP0P05317 312 aaKnown RBP8.25□□□□□ -1.09
VMA3YEL027W PRD1P25375 712 aa8.25□□□□□ -1.09
VMA3YEL027W NSR1P27476 414 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09 RIP-Chip
VMA3YEL027W NTH2P35172 780 aa8.25□□□□□ -1.09
VMA3YEL027W YKL222CP35995 705 aa8.25□□□□□ -1.09
VMA3YEL027W MDG1P53885 366 aa8.25□□□□□ -1.09
VMA3YEL027W YDL144CQ07589 356 aa8.25□□□□□ -1.09
VMA3YEL027W YER156CP40093 338 aaKnown RBP8.24□□□□□ -1.09
VMA3YEL027W BUD27P43573 796 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
VMA3YEL027W TEA1P47988 759 aa8.24□□□□□ -1.09
VMA3YEL027W NOP53Q12080 455 aaKnown RBP8.24□□□□□ -1.09
VMA3YEL027W ERT1P38140 529 aa8.23□□□□□ -1.09
VMA3YEL027W MPP10P47083 593 aaKnown RBP8.23□□□□□ -1.09
VMA3YEL027W ALE1Q08548 619 aa8.23□□□□□ -1.09
VMA3YEL027W CTI6Q08923 506 aa8.23□□□□□ -1.09
VMA3YEL027W CWH41P53008 833 aa8.22□□□□□ -1.09
VMA3YEL027W UGA3P26370 528 aa8.21□□□□□ -1.1
VMA3YEL027W VPS27P40343 622 aaKnown RBP8.21□□□□□ -1.1
VMA3YEL027W KIN4Q01919 800 aa8.21□□□□□ -1.1
VMA3YEL027W PHM7Q12252 991 aa8.21□□□□□ -1.1
VMA3YEL027W LPD1P09624 499 aaKnown RBP8.2□□□□□ -1.1
VMA3YEL027W SER1P33330 395 aaKnown RBP8.2□□□□□ -1.1
VMA3YEL027W YNL050CP53952 270 aa8.2□□□□□ -1.1
VMA3YEL027W THI22Q06490 572 aa8.2□□□□□ -1.1
VMA3YEL027W PRS1P32895 427 aaKnown RBP8.19□□□□□ -1.1
VMA3YEL027W YFR016CP43597 1233 aaKnown RBP8.19□□□□□ -1.1
VMA3YEL027W CDC45Q08032 650 aa8.19□□□□□ -1.1
VMA3YEL027W SSP2Q08646 371 aa8.19□□□□□ -1.1
VMA3YEL027W PFF1P38244 976 aa8.18□□□□□ -1.1
VMA3YEL027W SQS1P53866 767 aaKnown RBP8.18□□□□□ -1.1
VMA3YEL027W RAT1Q02792 1006 aaKnown RBP8.18□□□□□ -1.1
VMA3YEL027W NSE3Q05541 303 aa8.18□□□□□ -1.1
VMA3YEL027W UTP10P42945 1769 aaKnown RBP8.17□□□□□ -1.1
VMA3YEL027W MAM1P40065 302 aa8.17□□□□□ -1.1
VMA3YEL027W ZDS1P50111 915 aaKnown RBP8.17□□□□□ -1.1
VMA3YEL027W YGL082WP53155 381 aa8.17□□□□□ -1.1
VMA3YEL027W TPD3P31383 635 aa8.16□□□□□ -1.1
VMA3YEL027W RTT109Q07794 436 aa8.16□□□□□ -1.1
VMA3YEL027W SUI2P20459 304 aaKnown RBP8.15□□□□□ -1.1
VMA3YEL027W SMY1P32364 656 aaKnown RBP8.15□□□□□ -1.1
VMA3YEL027W GYP7P48365 746 aa8.14□□□□□ -1.11
VMA3YEL027W YRB30P53107 440 aaPredicted RBP8.14□□□□□ -1.11
VMA3YEL027W HEF3P53978 1044 aaKnown RBP8.14□□□□□ -1.11
VMA3YEL027W IRC3Q06683 689 aa8.14□□□□□ -1.11
VMA3YEL027W DIB1Q06819 143 aaPredicted RBP8.14□□□□□ -1.11
VMA3YEL027W LYS2P07702 1392 aa8.13□□□□□ -1.11
VMA3YEL027W ERO1Q03103 563 aa8.13□□□□□ -1.11
VMA3YEL027W BDF2Q07442 638 aa8.13□□□□□ -1.11
VMA3YEL027W RVB2Q12464 471 aaKnown RBP8.13□□□□□ -1.11
VMA3YEL027W ARG8P18544 423 aa8.12□□□□□ -1.11
VMA3YEL027W FPK1P53739 893 aa8.12□□□□□ -1.11
VMA3YEL027W NOP2P40991 618 aaKnown RBP8.11□□□□□ -1.11
VMA3YEL027W BMS1Q08965 1183 aaKnown RBP8.11□□□□□ -1.11
VMA3YEL027W TOP1P04786 769 aa8.1□□□□□ -1.11
VMA3YEL027W RPS9BP05755 195 aaKnown RBP8.1□□□□□ -1.11
VMA3YEL027W DCD1P06773 312 aa8.1□□□□□ -1.11
VMA3YEL027W SIT4P20604 311 aa8.1□□□□□ -1.11
VMA3YEL027W APL2P36000 726 aaPredicted RBP8.1□□□□□ -1.11
VMA3YEL027W YPR204WQ08995 1032 aa8.1□□□□□ -1.11
VMA3YEL027W COQ4O13525 335 aa8.09□□□□□ -1.11
VMA3YEL027W ICL1P28240 557 aaPredicted RBP8.09□□□□□ -1.11
VMA3YEL027W RRD1P40454 393 aaKnown RBP8.09□□□□□ -1.11
VMA3YEL027W PEX21P50091 288 aa8.09□□□□□ -1.11
VMA3YEL027W VPS64Q03944 604 aa8.09□□□□□ -1.11
VMA3YEL027W CAF20P12962 161 aaKnown RBP8.08□□□□□ -1.12
VMA3YEL027W SSA4P22202 642 aaKnown RBP8.08□□□□□ -1.12
VMA3YEL027W SLI15P38283 698 aa8.08□□□□□ -1.12
VMA3YEL027W ZDS2P54786 942 aa8.08□□□□□ -1.12
VMA3YEL027W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms