RNA–Protein interactions for RNA: YDR456W

NHX1, Transcript of Na+/H+ and K+/H+ exchanger, yeast

Gene NHX1, Length 1,902 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHX1	YDR456W	TY1B-DR3	Q99231	1755 aa		5.03	□□□□□ -1.6
NHX1	YDR456W	YBT1	P32386	1661 aa		5.03	□□□□□ -1.6
NHX1	YDR456W	TY3B-G	Q99315	1547 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	RTG1	P32607	177 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	OPY1	P38271	328 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	RTS3	P53289	263 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	YAF9	P53930	226 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	RPL34A	P87262	121 aa	Predicted RBP	5.02	□□□□□ -1.61
NHX1	YDR456W	MMS1	Q06211	1407 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	VTH1	P40438	1549 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	VTH2	P40890	1549 aa		5.02	□□□□□ -1.61
NHX1	YDR456W	GEA2	P39993	1459 aa	Known RBP	5.02	□□□□□ -1.61
NHX1	YDR456W	SSA2	P10592	639 aa	Known RBP	5.01	□□□□□ -1.61
NHX1	YDR456W	ATE1	P16639	503 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	KIC1	P38692	1080 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	ORC6	P38826	435 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	CST6	P40535	587 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	YPR204W	Q08995	1032 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	CFT1	Q06632	1357 aa	Known RBP	5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-LR1	P0C2J3	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-F	P0CX63	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-GR2	P0CX64	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-C	P25384	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-DR2	Q03494	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY1B-DR1	Q03855	1755 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-DR3	Q07791	1770 aa	Known RBP	5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-OR1	Q12113	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-DR1	Q12472	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-OR2	Q12501	1770 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	YNL035C	P53962	389 aa	Known RBP	5.01	□□□□□ -1.61
NHX1	YDR456W	JIP4	Q03361	876 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	PML39	Q03760	334 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	PDS5	Q04264	1277 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	CDC73	Q06697	393 aa		5.01	□□□□□ -1.61
NHX1	YDR456W	TY2B-B	Q12491	1770 aa		5	□□□□□ -1.61
NHX1	YDR456W	RTG2	P32608	588 aa	Known RBP	4.99	□□□□□ -1.61
NHX1	YDR456W	YDR344C	Q05510	147 aa		4.99	□□□□□ -1.61
NHX1	YDR456W	MDS3	P53094	1487 aa		4.99	□□□□□ -1.61
NHX1	YDR456W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.99	□□□□□ -1.61
NHX1	YDR456W	SNT2	P53127	1403 aa		4.99	□□□□□ -1.61
NHX1	YDR456W	ROX1	P25042	368 aa		4.99	□□□□□ -1.61
NHX1	YDR456W	VPS24	P36095	224 aa	Known RBP	4.99	□□□□□ -1.61
NHX1	YDR456W	ITT1	Q04638	464 aa		4.99	□□□□□ -1.61
NHX1	YDR456W	IQG1	Q12280	1495 aa		4.99	□□□□□ -1.61
NHX1	YDR456W	GDB1	Q06625	1536 aa		4.98	□□□□□ -1.61
NHX1	YDR456W	ARO1	P08566	1588 aa	Known RBP	4.98	□□□□□ -1.61
NHX1	YDR456W	MAG2	Q06436	670 aa	Known RBP	4.98	□□□□□ -1.61
NHX1	YDR456W	UBX5	Q06682	500 aa		4.98	□□□□□ -1.61
NHX1	YDR456W	TYW1	Q08960	810 aa	Known RBP	4.98	□□□□□ -1.61
NHX1	YDR456W	NOP58	Q12499	511 aa	Known RBP	4.98	□□□□□ -1.61
NHX1	YDR456W	EDE1	P34216	1381 aa		4.97	□□□□□ -1.61
NHX1	YDR456W	NMD2	P38798	1089 aa	Known RBP	4.97	□□□□□ -1.61
NHX1	YDR456W	FPR4	Q06205	392 aa	Predicted RBP	4.97	□□□□□ -1.61
NHX1	YDR456W	SUP45	P12385	437 aa	Known RBP	4.97	□□□□□ -1.61
NHX1	YDR456W	GAP1	P19145	602 aa	Predicted RBP	4.97	□□□□□ -1.61
NHX1	YDR456W	BUD21	Q08492	214 aa	Predicted RBP	4.97	□□□□□ -1.61
NHX1	YDR456W	RGR1	P19263	1082 aa		4.96	□□□□□ -1.62
NHX1	YDR456W	FKH1	P40466	484 aa		4.96	□□□□□ -1.62
NHX1	YDR456W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
NHX1	YDR456W	RNH70	P53331	553 aa		4.96	□□□□□ -1.62
NHX1	YDR456W	YNL108C	P53929	270 aa		4.96	□□□□□ -1.62
NHX1	YDR456W	MPC54	Q08550	464 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	GIN4	Q12263	1142 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	ASF1	P32447	279 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	SEC61	P32915	480 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	RPL34B	P40525	121 aa	Known RBP	4.95	□□□□□ -1.62
NHX1	YDR456W	MVP1	P40959	511 aa	Known RBP	4.95	□□□□□ -1.62
NHX1	YDR456W	OSW7	P43611	510 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	MDG1	P53885	366 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	MRX10	Q05648	414 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	NCR1	Q12200	1170 aa		4.95	□□□□□ -1.62
NHX1	YDR456W	LSP1	Q12230	341 aa	Known RBP	4.95	□□□□□ -1.62
NHX1	YDR456W	NOT3	P06102	836 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TRL1	P09880	827 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	PSE1	P32337	1089 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	NNF1	P47149	201 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	MSC6	Q08818	692 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	WHI5	Q12416	295 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	STB3	Q12427	513 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	AIR2	Q12476	344 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-H	O13535	1793 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-DR5	P0C2I2	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-DR6	P0C2I3	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-LR2	P0C2I5	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-PR2	P0C2J0	1756 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-JR1	P47098	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-ER1	Q03612	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-ML1	Q04711	1755 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-GR2	Q12269	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-OL	Q12273	1755 aa		4.94	□□□□□ -1.62
NHX1	YDR456W	TY1B-PL	Q12414	1755 aa	Known RBP	4.94	□□□□□ -1.62
NHX1	YDR456W	ENO1	P00924	437 aa	Known RBP	4.93	□□□□□ -1.62
NHX1	YDR456W	PDR1	P12383	1068 aa		4.93	□□□□□ -1.62
NHX1	YDR456W	ERP5	P38819	212 aa		4.93	□□□□□ -1.62
NHX1	YDR456W	PEX29	Q03370	554 aa		4.93	□□□□□ -1.62
NHX1	YDR456W	COG8	Q04632	607 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms