RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W IXR1P33417 597 aa4.66□□□□□ -1.66
SNX41YDR425W TEC1P18412 486 aa4.65□□□□□ -1.66
SNX41YDR425W RTT106P40161 455 aa4.64□□□□□ -1.67
SNX41YDR425W BIO2P32451 375 aa4.63□□□□□ -1.67
SNX41YDR425W EMW1P42842 904 aaKnown RBP4.63□□□□□ -1.67
SNX41YDR425W FRA1Q07825 749 aa4.63□□□□□ -1.67
SNX41YDR425W SUP45P12385 437 aaKnown RBP4.62□□□□□ -1.67
SNX41YDR425W ASH1P34233 588 aa4.62□□□□□ -1.67
SNX41YDR425W MSB3P48566 633 aaPredicted RBP4.62□□□□□ -1.67
SNX41YDR425W GUT2P32191 649 aa4.62□□□□□ -1.67
SNX41YDR425W BRE2P43132 505 aa4.62□□□□□ -1.67
SNX41YDR425W DMA2P53924 522 aa4.62□□□□□ -1.67
SNX41YDR425W YPL062WQ02781 134 aa4.62□□□□□ -1.67
SNX41YDR425W YDJ1P25491 409 aaKnown RBP4.61□□□□□ -1.67
SNX41YDR425W APL6P46682 809 aa4.61□□□□□ -1.67
SNX41YDR425W MRX12P47084 519 aa4.61□□□□□ -1.67
SNX41YDR425W YBL086CP38177 466 aa4.6□□□□□ -1.67
SNX41YDR425W HST3P53687 447 aa4.6□□□□□ -1.67
SNX41YDR425W MCM16Q12262 181 aa4.6□□□□□ -1.67
SNX41YDR425W GCR2Q01722 534 aa4.6□□□□□ -1.67
SNX41YDR425W STE20Q03497 939 aaKnown RBP4.6□□□□□ -1.67
SNX41YDR425W YJL007CP47080 104 aa4.59□□□□□ -1.67
SNX41YDR425W BIM1P40013 344 aa4.58□□□□□ -1.68
SNX41YDR425W YPP1P46951 817 aa4.58□□□□□ -1.68
SNX41YDR425W ITT1Q04638 464 aa4.58□□□□□ -1.68
SNX41YDR425W APP1P53933 587 aa4.58□□□□□ -1.68
SNX41YDR425W ENO2P00925 437 aaKnown RBP4.57□□□□□ -1.68
SNX41YDR425W ATG32P40458 529 aa4.57□□□□□ -1.68
SNX41YDR425W EMP47P43555 445 aa4.57□□□□□ -1.68
SNX41YDR425W YJR115WP47152 169 aa4.57□□□□□ -1.68
SNX41YDR425W RIM21P48565 533 aa4.57□□□□□ -1.68
SNX41YDR425W YNL108CP53929 270 aa4.57□□□□□ -1.68
SNX41YDR425W TIF1P10081 395 aaKnown RBP4.56□□□□□ -1.68
SNX41YDR425W UGA3P26370 528 aa4.56□□□□□ -1.68
SNX41YDR425W FBP26P32604 452 aa4.56□□□□□ -1.68
SNX41YDR425W MKS1P34072 584 aa4.55□□□□□ -1.68
SNX41YDR425W PTK2P47116 818 aaKnown RBP4.55□□□□□ -1.68
SNX41YDR425W MRX10Q05648 414 aa4.55□□□□□ -1.68
SNX41YDR425W UTP13Q05946 817 aaKnown RBP4.55□□□□□ -1.68
SNX41YDR425W STE6P12866 1290 aa4.54□□□□□ -1.68
SNX41YDR425W ISF1P32488 338 aa4.54□□□□□ -1.68
SNX41YDR425W ATG20Q07528 640 aa4.54□□□□□ -1.68
SNX41YDR425W RDS2P19541 446 aaKnown RBP4.54□□□□□ -1.68
SNX41YDR425W ISU1Q03020 165 aa4.54□□□□□ -1.68
SNX41YDR425W ATG3P40344 310 aa4.53□□□□□ -1.68
SNX41YDR425W AAD14P42884 376 aa4.53□□□□□ -1.68
SNX41YDR425W ENV9Q08651 330 aa4.53□□□□□ -1.68
SNX41YDR425W NUP85P46673 744 aa4.52□□□□□ -1.69
SNX41YDR425W SPT2P06843 333 aaPredicted RBP4.52□□□□□ -1.69
SNX41YDR425W ARG82P07250 355 aa4.52□□□□□ -1.69
SNX41YDR425W MET22P32179 357 aa4.52□□□□□ -1.69
SNX41YDR425W RTG2P32608 588 aaKnown RBP4.52□□□□□ -1.69
SNX41YDR425W DFG5Q05031 458 aa4.52□□□□□ -1.69
SNX41YDR425W ENO1P00924 437 aaKnown RBP4.51□□□□□ -1.69
SNX41YDR425W HAL5P38970 855 aaKnown RBP4.51□□□□□ -1.69
SNX41YDR425W RPL34BP40525 121 aaKnown RBP4.51□□□□□ -1.69
SNX41YDR425W LCB5Q06147 687 aaKnown RBP4.51□□□□□ -1.69
SNX41YDR425W PEP12P32854 288 aa4.5□□□□□ -1.69
SNX41YDR425W ISR1Q06098 443 aaKnown RBP4.5□□□□□ -1.69
SNX41YDR425W BDS1Q08347 646 aa4.5□□□□□ -1.69
SNX41YDR425W SRF1Q12516 437 aa4.5□□□□□ -1.69
SNX41YDR425W SOH1P38633 127 aa4.49□□□□□ -1.69
SNX41YDR425W YDR444WQ04093 687 aa4.49□□□□□ -1.69
SNX41YDR425W RPP2BP02400 110 aaKnown RBP4.48□□□□□ -1.69
SNX41YDR425W SIS2P36024 562 aa4.48□□□□□ -1.69
SNX41YDR425W OPT2Q06593 877 aa4.47□□□□□ -1.69
SNX41YDR425W GLY1P37303 387 aaKnown RBP4.47□□□□□ -1.69
SNX41YDR425W YJR098CP47139 656 aa4.47□□□□□ -1.69
SNX41YDR425W LSC2P53312 427 aa4.47□□□□□ -1.69
SNX41YDR425W YLR346CQ06139 101 aa4.47□□□□□ -1.69
SNX41YDR425W YPR204WQ08995 1032 aa4.47□□□□□ -1.69
SNX41YDR425W VTC4P47075 721 aa4.46□□□□□ -1.7
SNX41YDR425W HDA3Q06623 655 aa4.46□□□□□ -1.7
SNX41YDR425W WTM2Q12206 467 aa4.46□□□□□ -1.7
SNX41YDR425W GBP2P25555 427 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SNX41YDR425W UTR2P32623 467 aa4.45□□□□□ -1.7
SNX41YDR425W SLX8P40072 274 aa4.45□□□□□ -1.7
SNX41YDR425W MIP1P15801 1254 aa4.44□□□□□ -1.7
SNX41YDR425W DLD1P32891 587 aa4.44□□□□□ -1.7
SNX41YDR425W TTI1P36097 1038 aa4.44□□□□□ -1.7
SNX41YDR425W ACO2P39533 789 aa4.44□□□□□ -1.7
SNX41YDR425W CBC2Q08920 208 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SNX41YDR425W YDL176WQ12027 708 aa4.44□□□□□ -1.7
SNX41YDR425W TY1A-BLQ12266 440 aa4.44□□□□□ -1.7
SNX41YDR425W DLD3P39976 496 aaKnown RBP4.43□□□□□ -1.7
SNX41YDR425W UBP2Q01476 1272 aa4.43□□□□□ -1.7
SNX41YDR425W DAL1P32375 460 aa4.43□□□□□ -1.7
SNX41YDR425W TCB1Q12466 1186 aa4.43□□□□□ -1.7
SNX41YDR425W RLF2Q12495 606 aa4.43□□□□□ -1.7
SNX41YDR425W TBS1P38114 1094 aa4.42□□□□□ -1.7
SNX41YDR425W SSN3P39073 555 aa4.42□□□□□ -1.7
SNX41YDR425W AIM9P40053 627 aaKnown RBP4.42□□□□□ -1.7
SNX41YDR425W YFL034WP43564 1073 aa4.42□□□□□ -1.7
SNX41YDR425W MSN5P52918 1224 aa4.42□□□□□ -1.7
SNX41YDR425W SCW11P53189 542 aa4.42□□□□□ -1.7
SNX41YDR425W TSC13Q99190 310 aa4.42□□□□□ -1.7
SNX41YDR425W DAT1P13483 248 aaKnown RBP4.41□□□□□ -1.7
SNX41YDR425W GAR1P28007 205 aaKnown RBP4.41□□□□□ -1.7
SNX41YDR425W SUM1P46676 1062 aa4.41□□□□□ -1.7
SNX41YDR425W SWI5P08153 709 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms