RNA–Protein interactions for RNA: YDR170W-A

YDR170W-A, Transcript of Retrotransposon TYA Gag gene, yeastyeast

Gene YDR170W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR170W-AYDR170W-A TEA1P47988 759 aa7.14□□□□□ -1.27
YDR170W-AYDR170W-A PBS2P08018 668 aa7.13□□□□□ -1.27
YDR170W-AYDR170W-A OSH7P38755 437 aa7.13□□□□□ -1.27
YDR170W-AYDR170W-A JJJ3P47138 172 aa7.13□□□□□ -1.27
YDR170W-AYDR170W-A DLD1P32891 587 aa7.12□□□□□ -1.27
YDR170W-AYDR170W-A NSG2P53898 299 aa7.12□□□□□ -1.27
YDR170W-AYDR170W-A TBF1Q02457 562 aa7.11□□□□□ -1.27
YDR170W-AYDR170W-A YBL086CP38177 466 aa7.1□□□□□ -1.27
YDR170W-AYDR170W-A PUS6P53294 404 aa7.1□□□□□ -1.27
YDR170W-AYDR170W-A CCT8P47079 568 aaKnown RBP7.09□□□□□ -1.27
YDR170W-AYDR170W-A FPK1P53739 893 aa7.05□□□□□ -1.28
YDR170W-AYDR170W-A SAS10Q12136 610 aaPredicted RBP7.05□□□□□ -1.28
YDR170W-AYDR170W-A MAM3Q12296 706 aa7.05□□□□□ -1.28
YDR170W-AYDR170W-A YFL066CP43538 392 aa7.03□□□□□ -1.28
YDR170W-AYDR170W-A THI72Q08579 599 aa7.03□□□□□ -1.28
YDR170W-AYDR170W-A CKB1P43639 278 aa7.02□□□□□ -1.28
YDR170W-AYDR170W-A TRM1P15565 570 aaKnown RBP7.01□□□□□ -1.29
YDR170W-AYDR170W-A VAC17P25591 423 aa7.01□□□□□ -1.29
YDR170W-AYDR170W-A YMR196WQ04336 1088 aa7.01□□□□□ -1.29
YDR170W-AYDR170W-A AI1P03875 834 aa7□□□□□ -1.29
YDR170W-AYDR170W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
YDR170W-AYDR170W-A IES2P40154 320 aa6.99□□□□□ -1.29
YDR170W-AYDR170W-A NAM8Q00539 523 aaKnown RBP6.97□□□□□ -1.29
YDR170W-AYDR170W-A SBP1P10080 294 aaKnown RBP6.96□□□□□ -1.3
YDR170W-AYDR170W-A APP1P53933 587 aa6.96□□□□□ -1.3
YDR170W-AYDR170W-A EMW1P42842 904 aaKnown RBP6.95□□□□□ -1.3
YDR170W-AYDR170W-A YPR053CQ6Q5F3 151 aa6.95□□□□□ -1.3
YDR170W-AYDR170W-A CDC19P00549 500 aaKnown RBP6.94□□□□□ -1.3
YDR170W-AYDR170W-A NUP42P49686 430 aaKnown RBP6.94□□□□□ -1.3
YDR170W-AYDR170W-A SCJ1P25303 377 aa6.92□□□□□ -1.3
YDR170W-AYDR170W-A ITT1Q04638 464 aa6.92□□□□□ -1.3
YDR170W-AYDR170W-A DSF2P38213 736 aa6.9□□□□□ -1.3
YDR170W-AYDR170W-A HST2P53686 357 aa6.9□□□□□ -1.3
YDR170W-AYDR170W-A SKN7P38889 622 aa6.88□□□□□ -1.31
YDR170W-AYDR170W-A CUZ1P53899 274 aa6.88□□□□□ -1.31
YDR170W-AYDR170W-A DFG5Q05031 458 aa6.85□□□□□ -1.31
YDR170W-AYDR170W-A MKS1P34072 584 aa6.84□□□□□ -1.31
YDR170W-AYDR170W-A CEM1P39525 442 aa6.84□□□□□ -1.31
YDR170W-AYDR170W-A VTC4P47075 721 aa6.84□□□□□ -1.31
YDR170W-AYDR170W-A MMP1Q12372 583 aa6.84□□□□□ -1.31
YDR170W-AYDR170W-A TDA6Q06466 467 aa6.82□□□□□ -1.32
YDR170W-AYDR170W-A DIT2P21595 489 aa6.81□□□□□ -1.32
YDR170W-AYDR170W-A SPB4P25808 606 aaPredicted RBP6.81□□□□□ -1.32
YDR170W-AYDR170W-A YMR187CQ03236 431 aa6.81□□□□□ -1.32
YDR170W-AYDR170W-A SBE2P42223 864 aaKnown RBP6.8□□□□□ -1.32
YDR170W-AYDR170W-A ADE12P80210 433 aaKnown RBP6.8□□□□□ -1.32
YDR170W-AYDR170W-A BDS1Q08347 646 aa6.8□□□□□ -1.32
YDR170W-AYDR170W-A LEU3P08638 886 aa6.79□□□□□ -1.32
YDR170W-AYDR170W-A ESS1P22696 170 aa6.77□□□□□ -1.32
YDR170W-AYDR170W-A GLN1P32288 370 aaKnown RBP6.77□□□□□ -1.32
YDR170W-AYDR170W-A SYT1Q06836 1226 aa6.76□□□□□ -1.33
YDR170W-AYDR170W-A GLT1Q12680 2145 aaKnown RBP6.76□□□□□ -1.33
YDR170W-AYDR170W-A YJU3P28321 313 aa6.75□□□□□ -1.33
YDR170W-AYDR170W-A FBP26P32604 452 aa6.75□□□□□ -1.33
YDR170W-AYDR170W-A STE6P12866 1290 aa6.74□□□□□ -1.33
YDR170W-AYDR170W-A DAL1P32375 460 aa6.74□□□□□ -1.33
YDR170W-AYDR170W-A RSC30P38781 883 aa6.74□□□□□ -1.33
YDR170W-AYDR170W-A LEO1P38439 464 aa6.73□□□□□ -1.33
YDR170W-AYDR170W-A FIG4P42837 879 aa6.73□□□□□ -1.33
YDR170W-AYDR170W-A DIT1P21623 536 aa6.72□□□□□ -1.33
YDR170W-AYDR170W-A MCX1P38323 520 aaPredicted RBP6.71□□□□□ -1.34
YDR170W-AYDR170W-A YMR265CQ03508 461 aaKnown RBP6.71□□□□□ -1.34
YDR170W-AYDR170W-A YNR014WP53719 212 aa6.69□□□□□ -1.34
YDR170W-AYDR170W-A YDR461C-AQ2V2P7 80 aa6.69□□□□□ -1.34
YDR170W-AYDR170W-A YCK2P23292 546 aaKnown RBP6.68□□□□□ -1.34
YDR170W-AYDR170W-A UBP15P50101 1230 aa6.67□□□□□ -1.34
YDR170W-AYDR170W-A KRE33P53914 1056 aaKnown RBP6.67□□□□□ -1.34
YDR170W-AYDR170W-A AMN1P38285 549 aaPredicted RBP6.65□□□□□ -1.35
YDR170W-AYDR170W-A RPN1P38764 993 aaKnown RBP6.64□□□□□ -1.35
YDR170W-AYDR170W-A YDR215CQ12240 137 aa6.63□□□□□ -1.35
YDR170W-AYDR170W-A ISU1Q03020 165 aa6.61□□□□□ -1.35
YDR170W-AYDR170W-A TEC1P18412 486 aa6.6□□□□□ -1.35
YDR170W-AYDR170W-A SLN1P39928 1220 aaPredicted RBP6.6□□□□□ -1.35
YDR170W-AYDR170W-A DLD3P39976 496 aaKnown RBP6.6□□□□□ -1.35
YDR170W-AYDR170W-A MAC1P35192 417 aa6.59□□□□□ -1.35
YDR170W-AYDR170W-A BOI2P39969 1040 aa6.59□□□□□ -1.35
YDR170W-AYDR170W-A YPR084WQ06821 456 aa6.59□□□□□ -1.35
YDR170W-AYDR170W-A MCA1Q08601 432 aa6.59□□□□□ -1.35
YDR170W-AYDR170W-A SLA1P32790 1244 aa6.58□□□□□ -1.36
YDR170W-AYDR170W-A LSB6P42951 607 aa6.58□□□□□ -1.36
YDR170W-AYDR170W-A PKH3Q03306 898 aaPredicted RBP6.58□□□□□ -1.36
YDR170W-AYDR170W-A GPM1P00950 247 aaKnown RBP6.57□□□□□ -1.36
YDR170W-AYDR170W-A ARG8P18544 423 aa6.57□□□□□ -1.36
YDR170W-AYDR170W-A YNR021WP53723 404 aaKnown RBP6.57□□□□□ -1.36
YDR170W-AYDR170W-A MSN5P52918 1224 aa6.56□□□□□ -1.36
YDR170W-AYDR170W-A ATF2P53296 535 aa6.55□□□□□ -1.36
YDR170W-AYDR170W-A TY1A-DR3Q12441 440 aa6.55□□□□□ -1.36
YDR170W-AYDR170W-A RPP2BP02400 110 aaKnown RBP6.54□□□□□ -1.36
YDR170W-AYDR170W-A SSN3P39073 555 aa6.54□□□□□ -1.36
YDR170W-AYDR170W-A ATG20Q07528 640 aa6.54□□□□□ -1.36
YDR170W-AYDR170W-A GLC3P32775 704 aa6.53□□□□□ -1.36
YDR170W-AYDR170W-A KTR1P27810 393 aaKnown RBP6.52□□□□□ -1.37
YDR170W-AYDR170W-A IRC24P40580 263 aa6.52□□□□□ -1.37
YDR170W-AYDR170W-A TAT1P38085 619 aa6.51□□□□□ -1.37
YDR170W-AYDR170W-A MET1P36150 593 aa6.5□□□□□ -1.37
YDR170W-AYDR170W-A AIM7Q12156 149 aa6.49□□□□□ -1.37
YDR170W-AYDR170W-A KIN1P13185 1064 aa6.48□□□□□ -1.37
YDR170W-AYDR170W-A FPS1P23900 669 aa6.48□□□□□ -1.37
YDR170W-AYDR170W-A AHP1P38013 176 aaKnown RBP6.48□□□□□ -1.37
YDR170W-AYDR170W-A GUT2P32191 649 aa6.47□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms